HHLA3 35303

Name: HHLA3	Sequence: fasta or formatted (121aa)		NCBI GI: 72534678
Description: HERV-H LTR-associating 3 isoform 1		Referenced in: DNA Transposon and Retrovirus-related Sequences
Other entries for this name: alt prot [114aa] HERV-H LTR-associating 3 isoform 2 alt prot [76aa] HERV-H LTR-associating 3 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 7 1 C cysteine 5.0 6 1 D aspartate 0.8 1 1 E glutamate 7.4 9 2 F phenylalanine 1.7 2 1 G glycine 5.0 6 1 H histidine 2.5 3 1 I isoleucine 4.1 5 2 K lysine 5.8 7 2 L leucine 9.1 11 2 M methionine 4.1 5 1 N asparagine 1.7 2 1 P proline 9.1 11 2 Q glutamine 4.1 5 1 R arginine 9.1 11 2 S serine 11.6 14 1 T threonine 5.0 6 1 V valine 5.8 7 1 W tryptophan 0.8 1 1 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HERV-H LTR-associating 3 isoform 1 HHLA3 0.420 HERV-H LTR-associating 3 isoform 2 HHLA3 0.415 HERV-H LTR-associating 3 isoform 3 METTL3 0.009 methyltransferase like 3 SKIV2L 0.009 superkiller viralicidic activity 2-like homolog [Hom... TFDP1 0.004 transcription factor Dp-1 HCCA2 0.004 HCCA2 protein NCKIPSD 0.004 NCK interacting protein with SH3 domain isoform 1 [Ho... NCKIPSD 0.004 NCK interacting protein with SH3 domain isoform 2 [H... KLK14 0.004 kallikrein 14 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.