| Name: HHLA3 | Sequence: fasta or formatted (76aa) | NCBI GI: 81295798 | |
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Description: HERV-H LTR-associating 3 isoform 3
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Referenced in: DNA Transposon and Retrovirus-related Sequences
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Other entries for this name:
alt prot [121aa] HERV-H LTR-associating 3 isoform 1 alt prot [114aa] HERV-H LTR-associating 3 isoform 2 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.6 5 1 C cysteine 3.9 3 1 D aspartate 3.9 3 1 E glutamate 9.2 7 2 F phenylalanine 3.9 3 1 G glycine 5.3 4 1 H histidine 2.6 2 1 I isoleucine 2.6 2 1 K lysine 3.9 3 1 L leucine 10.5 8 2 M methionine 3.9 3 1 N asparagine 0.0 0 0 P proline 11.8 9 2 Q glutamine 5.3 4 1 R arginine 9.2 7 1 S serine 5.3 4 1 T threonine 6.6 5 1 V valine 2.6 2 1 W tryptophan 0.0 0 0 Y tyrosine 2.6 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 HERV-H LTR-associating 3 isoform 3 HHLA3 0.679 HERV-H LTR-associating 3 isoform 1 HHLA3 0.657 HERV-H LTR-associating 3 isoform 2 METTL3 0.015 methyltransferase like 3 C19orf39 0.015 hypothetical protein LOC126074 SKIV2L 0.015 superkiller viralicidic activity 2-like homolog [Hom... HCCA2 0.007 HCCA2 protein CENPN 0.007 centromere protein N isoform 1 CENPN 0.007 centromere protein N isoform 2Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
