Guide to the Human Genome
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Name: HCCA2 Sequence: fasta or formatted (237aa) NCBI GI: 34594669
Description:

HCCA2 protein

Referenced in:

Spindle, M phase, and Meiosis
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         16           2
 C cysteine            2.5          6           1
 D aspartate           4.6         11           2
 E glutamate           8.0         19           2
 F phenylalanine       5.9         14           2
 G glycine             7.2         17           2
 H histidine           5.1         12           2
 I isoleucine          3.4          8           1
 K lysine              7.2         17           2
 L leucine             8.9         21           2
 M methionine          2.1          5           1
 N asparagine          3.4          8           1
 P proline             3.8          9           1
 Q glutamine           3.0          7           1
 R arginine            3.8          9           1
 S serine              5.5         13           2
 T threonine           7.2         17           3
 V valine              6.3         15           2
 W tryptophan          1.7          4           1
 Y tyrosine            3.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HCCA2 protein 
MOBKL1A               0.296   MOB1, Mps One Binder kinase activator-like 1A 
MOBKL1B               0.292   Mob4B protein 
MOBKL2C               0.224   MOB1, Mps One Binder kinase activator-like 2C isofor...
MOBKL2C               0.224   MOB1, Mps One Binder kinase activator-like 2C isofor...
MOBKL2A               0.222   MOB-LAK 
MOBKL2B               0.214   MOB1, Mps One Binder kinase activator-like 2B 
MOBKL3                0.023   Mps One Binder kinase activator-like 3 isoform 3 [H...
MOBKL3                0.023   Mps One Binder kinase activator-like 3 isoform 2 [Ho...
MOBKL3                0.023   Mps One Binder kinase activator-like 3 isoform 1 [Ho...
TRIO                  0.017   triple functional domain (PTPRF interacting) 
FZD8                  0.017   frizzled 8 
C2orf29               0.017   hypothetical protein LOC55571 
YEATS2                0.015   YEATS domain containing 2 
TRIM67                0.015   tripartite motif-containing 67 
KRT9                  0.013   keratin 9 
SLC4A5                0.013   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.013   sodium bicarbonate transporter 4 isoform c 
ZIC2                  0.013   zinc finger protein of the cerebellum 2 
ANKS1A                0.013   ankyrin repeat and sterile alpha motif domain conta...
ZFHX3                 0.013   AT-binding transcription factor 1 
GATAD1                0.013   GATA zinc finger domain containing 1 
FNDC3B                0.013   fibronectin type III domain containing 3B 
FNDC3B                0.013   fibronectin type III domain containing 3B 
CAPNS1                0.013   calpain, small subunit 1 
CAPNS1                0.013   calpain, small subunit 1 
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.013   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC339192             0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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