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Search of human proteins with 7706757
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706757 H(+)-transporting two-sector ATPase [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706757 H(+)-transporting two-sector ATPase [Homo sapiens] 469 e-133
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 39 0.004
gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens] 39 0.004
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 39 0.004
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 37 0.021
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 36 0.035
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 35 0.046
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.079
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 33 0.18
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 33 0.18
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 33 0.18
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 33 0.18
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 33 0.18
gi|62243374 MAD1-like 1 protein [Homo sapiens] 33 0.23
gi|62243369 MAD1-like 1 protein [Homo sapiens] 33 0.23
gi|62243332 MAD1-like 1 protein [Homo sapiens] 33 0.23
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 33 0.23
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 33 0.23
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 33 0.30
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 33 0.30
gi|221219020 NYD-SP11 protein [Homo sapiens] 32 0.51
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 32 0.51
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens] 32 0.51
gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 ... 32 0.51
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K... 32 0.51
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 32 0.51
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.67
gi|157266334 tubby like protein 1 [Homo sapiens] 32 0.67
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 32 0.67
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 31 0.87
>gi|7706757 H(+)-transporting two-sector ATPase [Homo sapiens]
Length = 247
Score = 469 bits (1208), Expect = e-133
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI
Sbjct: 121 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 180
Query: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK 240
ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK
Sbjct: 181 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK 240
Query: 241 DEDLLFE 247
DEDLLFE
Sbjct: 241 DEDLLFE 247
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 114 EGTDSYEL------TGLARGGEQ--LAKLKRNYAKAVELLVELASLQTSF--VTLDEAIK 163
EG D +L +GL +GG + LKRN + V+ +V L L ++ V L +
Sbjct: 2490 EGDDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQVVQSVVHLYELLSALQGVVLQQDSY 2549
Query: 164 ITNRRVNAIEHVIIPRIERTLAYIITELD---EREREEFYRLKKIQEKKKILKEKSEKDL 220
I ++++ E + + R + I E E++R++ L+K ++ + L+EK ++
Sbjct: 2550 IEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK--QQAQYLEEKRRRER 2607
Query: 221 EQRRAAGEVLEPANLLAEEKDE 242
E E+ E LLA+ ++E
Sbjct: 2608 EWEARERELREREALLAQREEE 2629
>gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens]
Length = 1058
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 114 EGTDSYEL------TGLARGGEQ--LAKLKRNYAKAVELLVELASLQTSF--VTLDEAIK 163
EG D +L +GL +GG + LKRN + V+ +V L L ++ V L +
Sbjct: 731 EGDDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQVVQSVVHLYELLSALQGVVLQQDSY 790
Query: 164 ITNRRVNAIEHVIIPRIERTLAYIITELD---EREREEFYRLKKIQEKKKILKEKSEKDL 220
I ++++ E + + R + I E E++R++ L+K ++ + L+EK ++
Sbjct: 791 IEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK--QQAQYLEEKRRRER 848
Query: 221 EQRRAAGEVLEPANLLAEEKDE 242
E E+ E LLA+ ++E
Sbjct: 849 EWEARERELREREALLAQREEE 870
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 114 EGTDSYEL------TGLARGGEQ--LAKLKRNYAKAVELLVELASLQTSF--VTLDEAIK 163
EG D +L +GL +GG + LKRN + V+ +V L L ++ V L +
Sbjct: 2486 EGDDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQVVQSVVHLYELLSALQGVVLQQDSY 2545
Query: 164 ITNRRVNAIEHVIIPRIERTLAYIITELD---EREREEFYRLKKIQEKKKILKEKSEKDL 220
I ++++ E + + R + I E E++R++ L+K ++ + L+EK ++
Sbjct: 2546 IEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK--QQAQYLEEKRRRER 2603
Query: 221 EQRRAAGEVLEPANLLAEEKDE 242
E E+ E LLA+ ++E
Sbjct: 2604 EWEARERELREREALLAQREEE 2625
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 36.6 bits (83), Expect = 0.021
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 112 YHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNA 171
Y + DS + T L+R GE + K EL+ L +QT +E I++ N+ +
Sbjct: 183 YQKQIDSQKETLLSRRGEDSDYRSQLSKKNYELIQYLDEIQT-LTEANEKIEVQNQEMRK 241
Query: 172 IEHVIIPRIERT------LAYIITE----LDEREREEFYRLKKIQEKKKILKEKSEKDLE 221
+ +E+ + I+ + +D+ ++E + ++QE +LK K+E+D
Sbjct: 242 NLEESVQEMEKMTDEYNRMKAIVHQTDNVIDQLKKENDHYQLQVQELTDLLKSKNEEDDP 301
Query: 222 QRRAAGEVLEPANLLAEEKDEDLL 245
A +E L+ KD++++
Sbjct: 302 IMVAVNAKVEEWKLILSSKDDEII 325
Score = 28.1 bits (61), Expect = 7.4
Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 42/246 (17%)
Query: 1 MSGKDRIEIFPS--RMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLM 58
+ G + I PS R+ I +G LK + D LT R ++ +++ E++
Sbjct: 667 VKGGETSLIIPSLERLVNAIESKNAEGIFDASLHLKAQVDQLTGRNEELRQELRESRKEA 726
Query: 59 GEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 118
++ A A K + T++++ + V + G+ LP
Sbjct: 727 INYSQQLA--KANLKIDHLEKETSLLRQSEGSNVVFK-------GIDLP----------- 766
Query: 119 YELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIP 178
G+A + + Y + LL EL + + L+++++ NR+ I H
Sbjct: 767 ---DGIAPSSASIINSQNEYL--IHLLQELENKEKKLKNLEDSLEDYNRKFAVIRH---- 817
Query: 179 RIERTLAY--IITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLL 236
+++L Y ++E + + E K I+E+K+ L+++ ++D + + +L N L
Sbjct: 818 --QQSLLYKEYLSEKETWKTES----KTIKEEKRKLEDQVQQDAIKVKEYNNLL---NAL 868
Query: 237 AEEKDE 242
+ DE
Sbjct: 869 QMDSDE 874
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 35.8 bits (81), Expect = 0.035
Identities = 27/124 (21%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 129 EQLAKLKRNYAKAVELLV-ELASLQTSF----VTLDEAIKITNRRVNAIEHVIIPRIERT 183
+ L +R + +A++LL +LA ++S T+ EA + +R + + ++ +E
Sbjct: 144 QALQDSEREHTEALQLLKRQLAETKSSTKSLRTTIGEAFERLHRLLRERQKAMLEELEAD 203
Query: 184 LAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDED 243
A +T+++++ + +L+K+QE +IL+E+ + AG L + + +
Sbjct: 204 TARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETDRHTFLAGVASLSERLKGKIHETN 263
Query: 244 LLFE 247
L +E
Sbjct: 264 LTYE 267
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 35.4 bits (80), Expect = 0.046
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 40/180 (22%)
Query: 89 KAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE-LTGLARGGEQLAKLKRNYAKAVELLVE 147
KA+ I A K+ + +T V + D + + L R E++ K + +LL E
Sbjct: 115 KAKETILALKEEIVNLTKLVEQGSGLSMDQHSNIRDLLRFKEEVTKERD------QLLSE 168
Query: 148 LASLQTSFVTLDEAIKITNRRVNAIEHVIIP--------------------RIERTLAYI 187
+ L+ S E + T R EH I ++E+ L I
Sbjct: 169 VVKLRESLAQTTEQQQETERSKEEAEHAISQFQQEIQQRQNEASREFRKKEKLEKELKQI 228
Query: 188 ITELDERE-------------REEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPAN 234
++D R+ +EE +L++ +++KIL E++ K+LEQ + L+ N
Sbjct: 229 QADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAAKELEQFQMRNAKLQQEN 288
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 34.7 bits (78), Expect = 0.079
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 19/244 (7%)
Query: 1 MSGKDRIEIFPSR---MAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKML 57
+ G +R+ S+ ++Q + + L+ + + LL+KK D TL+ Q +++ +
Sbjct: 848 LEGAERVRHISSKVEELSQALSQKELEITKMDQLLLEKKRDVETLQ--QTIEEKDQQVTE 905
Query: 58 MGEVMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAG---VTLPVFEHYHE 114
+ M E L E KF+ G T+ + +N AKK+ V V+ + ++Y E
Sbjct: 906 ISFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRAEEAKKEQVEEDNEVSSGLKQNYDE 965
Query: 115 GTDS---------YELTGLARGGEQLA-KLKRNYAKAVELLVELASLQTSFVTLDEAIKI 164
+ + +E L + EQ KL+ ELL ++ L+ L + K
Sbjct: 966 MSPAGQISKEELQHEFDLLKKENEQRKRKLQAALINRKELLQRVSRLEEELANLKDESK- 1024
Query: 165 TNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRR 224
++ E + + Y + + +E LK+ +K++ + KDLE++
Sbjct: 1025 KEIPLSETERGEVEEDKENKEYSEKCVTSKCQEIEIYLKQTISEKEVELQHIRKDLEEKL 1084
Query: 225 AAGE 228
AA E
Sbjct: 1085 AAEE 1088
Score = 32.3 bits (72), Expect = 0.39
Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 13/218 (5%)
Query: 26 AQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQ 85
AQT L +K D L +++L ++ ET+ L E A +E K +
Sbjct: 2268 AQTEVQLQQKVCDTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQ-----LT 2322
Query: 86 NVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYEL--TGLARGGEQLAKLKRNYAKAVE 143
+++ + K + +K N+ G+ SYE T L E ++L +
Sbjct: 2323 DLSNSLEKCKEQKGNLEGIIRQQEADIQNSKFSYEQLETDLQASRELTSRLHEEINMKEQ 2382
Query: 144 LLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLK 203
++ L S + +EAI++ + I +E L+ E E E +
Sbjct: 2383 KIISLLSGK------EEAIQVAIAELRQQHDKEIKELENLLSQEEEENIVLEEENKKAVD 2436
Query: 204 KIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKD 241
K + + LK +++++Q+ ++ + L ++D
Sbjct: 2437 KTNQLMETLKTIKKENIQQKAQLDSFVKSMSSLQNDRD 2474
Score = 28.5 bits (62), Expect = 5.6
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 190 ELDER----EREEFYRLKKIQE----KKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKD 241
EL+E+ E+E+ KK+QE +K ILK+ EK+ R + + N L E+ D
Sbjct: 1161 ELEEKILALEKEKEQLQKKLQEALTSRKAILKKAQEKERHLREELKQQKDDYNRLQEQFD 1220
Query: 242 E 242
E
Sbjct: 1221 E 1221
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 33.5 bits (75), Expect = 0.18
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 28 TGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNV 87
T +KK D + + Q K+ + + L+ E + + +LAE + A + T ++N
Sbjct: 975 TAEAKIKKLEDEILVMDDQN-NKLSKERKLLEERISDLTTNLAEEEEKAKNL--TKLKNK 1031
Query: 88 NKAQV---KIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVEL 144
+++ + ++R KK+ + L + EG S +A Q+A+LK AK E
Sbjct: 1032 HESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE- 1090
Query: 145 LVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKK 204
LQ + LD+ I N NA++ + R L I++L E E K
Sbjct: 1091 -----ELQAALARLDDEIAQKN---NALKKI------RELEGHISDLQEDLDSERAARNK 1136
Query: 205 IQEKKKILKEKSE 217
+++K+ L E+ E
Sbjct: 1137 AEKQKRDLGEELE 1149
Score = 28.5 bits (62), Expect = 5.6
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 19 MKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD 78
++ RLK + R L+K L ++I + + + E+ + A E +
Sbjct: 1039 LEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALAR 1098
Query: 79 FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNY 138
+ Q N A KIR + +++ + E DS E+ A+ K
Sbjct: 1099 LDDEIAQK-NNALKKIRELEGHISDL--------QEDLDS----------ERAARNKAEK 1139
Query: 139 AKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREE 198
K +L EL +L+T L++ + T A + + + E+ + + LDE R
Sbjct: 1140 QKR-DLGEELEALKTE---LEDTLDST-----ATQQELRAKREQEVTVLKKALDEETRSH 1190
Query: 199 FYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLFE 247
+++++++K E+ + LEQ + A L+ E+++ DL E
Sbjct: 1191 EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGE 1239
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 33.5 bits (75), Expect = 0.18
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 28 TGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNV 87
T +KK D + + Q K+ + + L+ E + + +LAE + A + T ++N
Sbjct: 982 TAEAKIKKLEDEILVMDDQN-NKLSKERKLLEERISDLTTNLAEEEEKAKNL--TKLKNK 1038
Query: 88 NKAQV---KIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVEL 144
+++ + ++R KK+ + L + EG S +A Q+A+LK AK E
Sbjct: 1039 HESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE- 1097
Query: 145 LVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKK 204
LQ + LD+ I N NA++ + R L I++L E E K
Sbjct: 1098 -----ELQAALARLDDEIAQKN---NALKKI------RELEGHISDLQEDLDSERAARNK 1143
Query: 205 IQEKKKILKEKSE 217
+++K+ L E+ E
Sbjct: 1144 AEKQKRDLGEELE 1156
Score = 28.5 bits (62), Expect = 5.6
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 19 MKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD 78
++ RLK + R L+K L ++I + + + E+ + A E +
Sbjct: 1046 LEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALAR 1105
Query: 79 FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNY 138
+ Q N A KIR + +++ + E DS E+ A+ K
Sbjct: 1106 LDDEIAQK-NNALKKIRELEGHISDL--------QEDLDS----------ERAARNKAEK 1146
Query: 139 AKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREE 198
K +L EL +L+T L++ + T A + + + E+ + + LDE R
Sbjct: 1147 QKR-DLGEELEALKTE---LEDTLDST-----ATQQELRAKREQEVTVLKKALDEETRSH 1197
Query: 199 FYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLFE 247
+++++++K E+ + LEQ + A L+ E+++ DL E
Sbjct: 1198 EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGE 1246
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 33.5 bits (75), Expect = 0.18
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 28 TGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNV 87
T +KK D + + Q K+ + + L+ E + + +LAE + A + T ++N
Sbjct: 982 TAEAKIKKLEDEILVMDDQN-NKLSKERKLLEERISDLTTNLAEEEEKAKNL--TKLKNK 1038
Query: 88 NKAQV---KIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVEL 144
+++ + ++R KK+ + L + EG S +A Q+A+LK AK E
Sbjct: 1039 HESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE- 1097
Query: 145 LVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKK 204
LQ + LD+ I N NA++ + R L I++L E E K
Sbjct: 1098 -----ELQAALARLDDEIAQKN---NALKKI------RELEGHISDLQEDLDSERAARNK 1143
Query: 205 IQEKKKILKEKSE 217
+++K+ L E+ E
Sbjct: 1144 AEKQKRDLGEELE 1156
Score = 28.5 bits (62), Expect = 5.6
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 19 MKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD 78
++ RLK + R L+K L ++I + + + E+ + A E +
Sbjct: 1046 LEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALAR 1105
Query: 79 FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNY 138
+ Q N A KIR + +++ + E DS E+ A+ K
Sbjct: 1106 LDDEIAQK-NNALKKIRELEGHISDL--------QEDLDS----------ERAARNKAEK 1146
Query: 139 AKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREE 198
K +L EL +L+T L++ + T A + + + E+ + + LDE R
Sbjct: 1147 QKR-DLGEELEALKTE---LEDTLDST-----ATQQELRAKREQEVTVLKKALDEETRSH 1197
Query: 199 FYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLFE 247
+++++++K E+ + LEQ + A L+ E+++ DL E
Sbjct: 1198 EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGE 1246
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 33.5 bits (75), Expect = 0.18
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 28 TGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNV 87
T +KK D + + Q K+ + + L+ E + + +LAE + A + T ++N
Sbjct: 975 TAEAKIKKLEDEILVMDDQN-NKLSKERKLLEERISDLTTNLAEEEEKAKNL--TKLKNK 1031
Query: 88 NKAQV---KIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVEL 144
+++ + ++R KK+ + L + EG S +A Q+A+LK AK E
Sbjct: 1032 HESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEE- 1090
Query: 145 LVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKK 204
LQ + LD+ I N NA++ + R L I++L E E K
Sbjct: 1091 -----ELQAALARLDDEIAQKN---NALKKI------RELEGHISDLQEDLDSERAARNK 1136
Query: 205 IQEKKKILKEKSE 217
+++K+ L E+ E
Sbjct: 1137 AEKQKRDLGEELE 1149
Score = 28.5 bits (62), Expect = 5.6
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 19 MKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGD 78
++ RLK + R L+K L ++I + + + E+ + A E +
Sbjct: 1039 LEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALAR 1098
Query: 79 FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNY 138
+ Q N A KIR + +++ + E DS E+ A+ K
Sbjct: 1099 LDDEIAQK-NNALKKIRELEGHISDL--------QEDLDS----------ERAARNKAEK 1139
Query: 139 AKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREE 198
K +L EL +L+T L++ + T A + + + E+ + + LDE R
Sbjct: 1140 QKR-DLGEELEALKTE---LEDTLDST-----ATQQELRAKREQEVTVLKKALDEETRSH 1190
Query: 199 FYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLFE 247
+++++++K E+ + LEQ + A L+ E+++ DL E
Sbjct: 1191 EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLAGE 1239
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 33.5 bits (75), Expect = 0.18
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Query: 114 EGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIE 173
EG + LA QL +L++ + ELL++ Q L+ I+ + A+
Sbjct: 250 EGPSHHLALQLANAKAQLRRLRQELEEKAELLLDS---QAEVQGLEAEIRRLRQEAQALS 306
Query: 174 HVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSE------KDLEQRRAAG 227
+ A + E E RE RL ++QE+ + +E+ + LE+ R
Sbjct: 307 G------QAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEAYKSQLEEERVLS 360
Query: 228 EVLEPANLLAEEKDE 242
VLE + L EE+ E
Sbjct: 361 GVLEASKALLEEQLE 375
>gi|62243374 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 33.1 bits (74), Expect = 0.23
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 193 EREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
+R +E R++++QE++ +EK ++ LE+ R + L+ A+ EK++ L
Sbjct: 101 DRNQELLTRIRQLQEREAGAEEKMQEQLERNRQCQQNLDAASKRLREKEDSL 152
>gi|62243369 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 33.1 bits (74), Expect = 0.23
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 193 EREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
+R +E R++++QE++ +EK ++ LE+ R + L+ A+ EK++ L
Sbjct: 101 DRNQELLTRIRQLQEREAGAEEKMQEQLERNRQCQQNLDAASKRLREKEDSL 152
>gi|62243332 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 33.1 bits (74), Expect = 0.23
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 193 EREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
+R +E R++++QE++ +EK ++ LE+ R + L+ A+ EK++ L
Sbjct: 101 DRNQELLTRIRQLQEREAGAEEKMQEQLERNRQCQQNLDAASKRLREKEDSL 152
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 33.1 bits (74), Expect = 0.23
Identities = 40/230 (17%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 31 NLLKKKSDALTLRFRQILKKIIETKMLM---GEVMREAAFSLAEAKFTAGDFSTTVIQNV 87
NL K +D + ++ + + E L+ GE + L E + + +++ +
Sbjct: 287 NLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEMLEKI 346
Query: 88 NKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELL-- 145
+ + ++ D ++ + G E+LA + A +++
Sbjct: 347 GRLEKELENANDLLSAT---------------KRKGAILSEEELAAMSPTAAAVAKIVKP 391
Query: 146 -VELASLQTSFVTLDEAI---KITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYR 201
++L L ++V + + K+ N+R+N I+ +E + +R+REE+ R
Sbjct: 392 GMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPIL-----KRQREEYER 446
Query: 202 LKKIQEKKKILKEKS-------EKDLEQRRAAGEVLEPANLLAEEKDEDL 244
+K + E++ ++D ++ VLE N E + +DL
Sbjct: 447 AQKAVASLSVKLEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQVKDL 496
Score = 27.7 bits (60), Expect = 9.6
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 138 YAKAVELLV-ELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDERER 196
Y + VELL EL LQ S E +++T + + +H + + T+ ++ E ++ R
Sbjct: 1224 YRQRVELLERELQELQDSLNAEREKVQVTAKTM--AQHEELMKKTETMN-VVMETNKMLR 1280
Query: 197 EEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
EE KE+ E+DL+Q +A LE L +E + +L
Sbjct: 1281 EE--------------KERLEQDLQQMQAKVRKLELDILPLQEANAEL 1314
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 33.1 bits (74), Expect = 0.23
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 124 LARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRR---VNAIE----HVI 176
LA E+ A L+RN+ +AVE L ASL +EA+++ + +N +E H
Sbjct: 1625 LAEKDEECANLRRNHQRAVESL--QASLDAETRARNEALRLKKKMEGDLNDLELQLGHAT 1682
Query: 177 IPRIERTLAYIITELDERE----REEFYRL-KKIQEKKKILKEKSE---KDLEQRRAAGE 228
E A + + +E R+E RL ++ E+ + L+ ++ +LE+ RAA E
Sbjct: 1683 RQATEAQAATRLMQAQLKEEQAGRDEEQRLAAELHEQAQALERRASLLAAELEELRAALE 1742
Query: 229 VLEPANLLAEEK 240
E + LAE++
Sbjct: 1743 QGERSRRLAEQE 1754
Score = 28.9 bits (63), Expect = 4.3
Identities = 45/233 (19%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 12 SRMAQTIMKARLKGAQTGRNL-------LKKKSDALTLRFRQILKKIIETKMLMGEVMRE 64
++ A +M+A+LK Q GR+ L +++ AL R + ++ E + + + E
Sbjct: 1688 AQAATRLMQAQLKEEQAGRDEEQRLAAELHEQAQALERRASLLAAELEELRAALEQ--GE 1745
Query: 65 AAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKD-NVAGVTLPVFEHYHEGTDSYE--- 120
+ LAE + ++ + N + + K + ++A ++ V E E ++ E
Sbjct: 1746 RSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAK 1805
Query: 121 --LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVI-- 176
+T A E+L K + A L+ TL++ ++ R+ E
Sbjct: 1806 KAITDAAMMAEELKKEQDTSAH----------LERMKKTLEQTVRELQARLEEAEQAALR 1855
Query: 177 -----IPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRR 224
+ ++E + + ELD +++ LK +++ ++ +KE + + E R+
Sbjct: 1856 GGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKELAYQAEEDRK 1908
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 32.7 bits (73), Expect = 0.30
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 153 TSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKIL 212
T+ DEA+ + N V + + + R L T L+++++ + K ++EK K L
Sbjct: 1385 TAIYQKDEALHVKNEAVKQQDKALEQK-GRDLEQKDTALEQKDKALEPKDKDLEEKDKAL 1443
Query: 213 KEKS------EKDLEQRRAAGEVLEPANLLAEEKDEDL 244
++K +K LEQ+ A LE + E KD+DL
Sbjct: 1444 EQKDKIPEEKDKALEQKDTA---LEQKDKALEPKDKDL 1478
Score = 30.4 bits (67), Expect = 1.5
Identities = 17/54 (31%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 191 LDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
L+ ++++ + + +++K+KI +EK +K L+Q+ + E P + +AE KD DL
Sbjct: 1471 LEPKDKDLEQKDRVLEQKEKIPEEK-DKALDQKVRSVEHKAPEDTVAEMKDRDL 1523
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 32.7 bits (73), Expect = 0.30
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 172 IEHVIIPRIERTLAYIITELDEREREEFYR--LKKIQEKKKILKEKSEKDLEQRRAAGEV 229
IE R+E +A + E E+ ++E R L++++E K+I++++ ++LE++R A
Sbjct: 126 IEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQA--- 182
Query: 230 LEPANLLAEEKDE 242
E A A E++E
Sbjct: 183 -ELAAQKAREEEE 194
Score = 28.1 bits (61), Expect = 7.4
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 167 RRVNAIEHVIIPRIERTLAY----IITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQ 222
+R + IE ++ R+E ++ EL+ + + E K +E+++ +E+ E+ LE+
Sbjct: 148 KRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEE 207
Query: 223 RRAAGEVLEPANLLAEEK 240
++ E LAEE+
Sbjct: 208 NNR--KIAEAQAKLAEEQ 223
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 32.0 bits (71), Expect = 0.51
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 192 DEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDL 244
+E E EE K+ +EKKK KEK +++++++ E E +++EE+ E L
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFE--EKEEIMSEEETESL 2321
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 190 ELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDE 242
E + RE EE + ++ E+K++ KE+ EK +++ E ++ + EEK+E
Sbjct: 2259 EEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEE 2311
Score = 28.1 bits (61), Expect = 7.4
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 195 EREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKDED 243
E+EE + KK +EKKK ++ E+ E++ E +L EE++E+
Sbjct: 2281 EKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEE 2329
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 144 LLVELASLQTSFVTLDEA-------IKITNRRVNAIEHVIIPRIERTLAYIITELDERER 196
+L EL + S + +EA + NRR+ +E + R + LA + +L+E E+
Sbjct: 60 VLEELHKAEDSLLAAEEAAAKAEADVASLNRRIQLVEEEL-DRAQERLATALQKLEEAEK 118
Query: 197 EEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKD 241
+ + K+++ +++KD E+ L+ A +AE+ D
Sbjct: 119 AA----DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD 159
>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 144 LLVELASLQTSFVTLDEA-------IKITNRRVNAIEHVIIPRIERTLAYIITELDERER 196
+L EL + S + +EA + NRR+ +E + R + LA + +L+E E+
Sbjct: 60 VLEELHKAEDSLLAAEEAAAKAEADVASLNRRIQLVEEEL-DRAQERLATALQKLEEAEK 118
Query: 197 EEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKD 241
+ + K+++ +++KD E+ L+ A +AE+ D
Sbjct: 119 AA----DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD 159
>gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 1 [Homo sapiens]
Length = 953
Score = 32.0 bits (71), Expect = 0.51
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 LARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR-IER 182
+A E+LAK + A+ E + L S +A + N + ++H+ + +R
Sbjct: 263 IASISEELAKKTEDAARQQEEITHLLSQIVDLQKKAKACAVENEEL--VQHLGAAKDAQR 320
Query: 183 TLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEE 239
L + EL+++ E L + QE+ K L+ K+ + RR L P + LA E
Sbjct: 321 QLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNTTSRRYHSLGLFPMDSLAAE 377
>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 2 [Homo sapiens]
Length = 686
Score = 32.0 bits (71), Expect = 0.51
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 LARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPR-IER 182
+A E+LAK + A+ E + L S +A + N + ++H+ + +R
Sbjct: 205 IASISEELAKKTEDAARQQEEITHLLSQIVDLQKKAKACAVENEEL--VQHLGAAKDAQR 262
Query: 183 TLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEE 239
L + EL+++ E L + QE+ K L+ K+ + RR L P + LA E
Sbjct: 263 QLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNTTSRRYHSLGLFPMDSLAAE 319
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 32.0 bits (71), Expect = 0.51
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 192 DEREREEFYRLKKIQEKK----KILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLF 246
DE ERE R K+ QEK+ K+LKE+ EK L ++ ++LE E+ L+F
Sbjct: 835 DEEERE--LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMF 891
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 31.6 bits (70), Expect = 0.67
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 124 LARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERT 183
+A E++ +LKRNY + VE + ++L + +EAI++ ++E
Sbjct: 1577 IAEKDEEIEQLKRNYQRTVETM--QSALDAEVRSRNEAIRLKK------------KMEGD 1622
Query: 184 LAYIITELDEREREEFYRLKKIQEKKKILKE---------KSEKDLEQRRAAGEVLEPAN 234
L I +L R+ LK ++ + LK+ + ++DL+++ A E AN
Sbjct: 1623 LNEIEIQLSHANRQAAETLKHLRSVQGQLKDTQLHLDDALRGQEDLKEQLAIVE--RRAN 1680
Query: 235 LLAEEKDE 242
LL E +E
Sbjct: 1681 LLQAEVEE 1688
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 31.6 bits (70), Expect = 0.67
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 190 ELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGE 228
E DE E E + K + KK L+EKS DL++RRA +
Sbjct: 125 EEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQ 163
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 31.6 bits (70), Expect = 0.67
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 124 LARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERT 183
+A E+L +LKRN+ + VE S+Q+ TLD I+ N + I ++E
Sbjct: 1580 IAEKDEELDQLKRNHLRVVE------SMQS---TLDAEIRSRNDALR-----IKKKMEGD 1625
Query: 184 LAYIITELDEREREEFYRLKKIQEKKKILKE---------KSEKDLEQRRAAGEVLEPAN 234
L + +L+ R+ L+ ++ + ILK+ + + DL+++ A E AN
Sbjct: 1626 LNEMEIQLNHANRQAAEALRNLRNTQGILKDTQLHLDDAIRGQDDLKEQLAMVE--RRAN 1683
Query: 235 LLAEEKDE 242
L+ E +E
Sbjct: 1684 LMQAEVEE 1691
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 31.2 bits (69), Expect = 0.87
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 138 YAKAVELLVELASLQTSFVTLDEA-IKITNRRVNAIEHVIIPRIERTLAYIITELDERER 196
Y++A++ E L T EA + NRR+ +E + R + LA + +L+E E+
Sbjct: 60 YSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEEL-DRAQERLATALQKLEEAEK 118
Query: 197 EEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEKD 241
+ + K+++ +++KD E+ L+ A +AE+ D
Sbjct: 119 AA----DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,180,784
Number of Sequences: 37866
Number of extensions: 281079
Number of successful extensions: 2857
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 2460
Number of HSP's gapped (non-prelim): 540
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.