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Search of human proteins with 7705999
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705999 transmembrane protein 9 [Homo sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705999 transmembrane protein 9 [Homo sapiens] 373 e-104
gi|11034855 TMEM9 domain family, member B [Homo sapiens] 213 1e-55
gi|114326453 a disintegrin and metalloproteinase domain 7 [Homo ... 31 0.68
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 28 4.4
gi|115583667 sodium channel, voltage-gated, type XI, alpha [Homo... 28 4.4
gi|116534898 desmoglein 2 preproprotein [Homo sapiens] 28 5.7
gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... 28 5.7
gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... 28 5.7
gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... 28 5.7
gi|4757710 amiloride-sensitive cation channel 3 isoform a [Homo ... 27 7.5
gi|9998946 amiloride-sensitive cation channel 3 isoform b [Homo ... 27 7.5
gi|9998948 amiloride-sensitive cation channel 3 isoform c [Homo ... 27 7.5
gi|222352177 nuclear factor of kappa light polypeptide gene enha... 27 9.8
gi|125628636 keratin 80 isoform a [Homo sapiens] 27 9.8
gi|125628632 keratin 80 isoform b [Homo sapiens] 27 9.8
gi|222352179 nuclear factor of kappa light polypeptide gene enha... 27 9.8
gi|222352175 nuclear factor of kappa light polypeptide gene enha... 27 9.8
gi|222352173 nuclear factor of kappa light polypeptide gene enha... 27 9.8
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 27 9.8
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 27 9.8
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 27 9.8
>gi|7705999 transmembrane protein 9 [Homo sapiens]
Length = 183
Score = 373 bits (958), Expect = e-104
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MKLLSLVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVE 60
MKLLSLVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVE
Sbjct: 1 MKLLSLVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVE 60
Query: 61 PMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDPLIRKPD 120
PMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDPLIRKPD
Sbjct: 61 PMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDPLIRKPD 120
Query: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQRKTVFDRHK 180
AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQRKTVFDRHK
Sbjct: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQRKTVFDRHK 180
Query: 181 MLS 183
MLS
Sbjct: 181 MLS 183
>gi|11034855 TMEM9 domain family, member B [Homo sapiens]
Length = 198
Score = 213 bits (541), Expect = 1e-55
Identities = 106/182 (58%), Positives = 138/182 (75%), Gaps = 2/182 (1%)
Query: 4 LSLVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVEPMP 63
LS +A+ LL ++A K+ ED+RCKCICPPY+ SGHIYN+N+SQKDC+CLHVVEPMP
Sbjct: 17 LSCLALSVLLLAQLSDAAKNFEDVRCKCICPPYKENSGHIYNKNISQKDCDCLHVVEPMP 76
Query: 64 VPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDPLI-RKPDAY 122
V G DVEAYCL CEC+YEERS+ TIKV I+IYLS++G LLLYM +L LV+P++ R+ +
Sbjct: 77 VRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMVYLTLVEPILKRRLFGH 136
Query: 123 TEQLHNEEENEDARSMAAAAASLGGPRAN-TVLERVEGAQQRWKLQVQEQRKTVFDRHKM 181
+ + ++++ D + A A L R+ VL +VE AQQRWKLQVQEQRK+VFDRH +
Sbjct: 137 AQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQEQRKSVFDRHVV 196
Query: 182 LS 183
LS
Sbjct: 197 LS 198
>gi|114326453 a disintegrin and metalloproteinase domain 7 [Homo
sapiens]
Length = 754
Score = 30.8 bits (68), Expect = 0.68
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 40 SGHIYNQNVSQKDCNCLHVVEPMPVPGHDVEAYC------LLCECRYEERSTTTIKVIIV 93
+G N NC PV GH ++ +C + CE + T + V++V
Sbjct: 618 NGECLNMEKVYISTNCPSQCNENPVDGHGLQCHCEEGQAPVACEETLHVTNITILVVVLV 677
Query: 94 IYLSVVGALLLYMAF 108
+ + +G L+L + +
Sbjct: 678 LVIVGIGVLILLVRY 692
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 28.1 bits (61), Expect = 4.4
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 124 EQLHNEEENEDARSMAAAAASLG---GPRANTVLERVEGAQQR 163
E+ EEE E+ AAAA +LG GPR+ + E E + R
Sbjct: 757 EEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDR 799
>gi|115583667 sodium channel, voltage-gated, type XI, alpha [Homo
sapiens]
Length = 1791
Score = 28.1 bits (61), Expect = 4.4
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 77 ECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLV 112
EC E +++++ VI+ I ++V+G L++ F+ L+
Sbjct: 775 ECMQEANASSSLCVIVFILITVIGKLVVLNLFIALL 810
>gi|116534898 desmoglein 2 preproprotein [Homo sapiens]
Length = 1118
Score = 27.7 bits (60), Expect = 5.7
Identities = 19/106 (17%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 77 ECRYEERSTTTIKVIIVIY----LSVVGALLLYMAFLMLVDPLIRKPDAYTEQLHNEEEN 132
E RY + T T+K++ + ++ G +L+ + + P + +P + + ++ E
Sbjct: 456 ESRYVQNGTYTVKIVAISEDYPRKTITGTVLINVEDINDNCPTLIEP---VQTICHDAEY 512
Query: 133 EDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQRKTVFDR 178
+ + GP + +V+++ G ++WK+ QE + +
Sbjct: 513 VNVTAEDLDGHPNSGPFSFSVIDKPPGMAEKWKIARQESTSVLLQQ 558
>gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 27.7 bits (60), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 51 KDCNCLHVVEPMPVPGHDVEAYCLLCECRYEE 82
++CN L +VE P G D A C L C YE+
Sbjct: 95 QNCN-LALVELQPDRGEDAIAACFLINCLYEQ 125
>gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 27.7 bits (60), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 51 KDCNCLHVVEPMPVPGHDVEAYCLLCECRYEE 82
++CN L +VE P G D A C L C YE+
Sbjct: 95 QNCN-LALVELQPDRGEDAIAACFLINCLYEQ 125
>gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1
precursor [Homo sapiens]
Length = 529
Score = 27.7 bits (60), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 51 KDCNCLHVVEPMPVPGHDVEAYCLLCECRYEE 82
++CN L +VE P G D A C L C YE+
Sbjct: 95 QNCN-LALVELQPDRGEDAIAACFLINCLYEQ 125
>gi|4757710 amiloride-sensitive cation channel 3 isoform a [Homo
sapiens]
Length = 531
Score = 27.3 bits (59), Expect = 7.5
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 6 LVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVEPMPVP 65
++ +G + P + S + + + PP+ + S N N + + L P P P
Sbjct: 249 IIDQLGLGVSPGYQTFVSCQQQQLSFLPPPWGDCSSASLNPNYEPEPSDPLGSPSPSPSP 308
Query: 66 GHDVEAYCLLCECRYEER 83
+ + L CE RY R
Sbjct: 309 PYTLMGCRLACETRYVAR 326
>gi|9998946 amiloride-sensitive cation channel 3 isoform b [Homo
sapiens]
Length = 549
Score = 27.3 bits (59), Expect = 7.5
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 6 LVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVEPMPVP 65
++ +G + P + S + + + PP+ + S N N + + L P P P
Sbjct: 249 IIDQLGLGVSPGYQTFVSCQQQQLSFLPPPWGDCSSASLNPNYEPEPSDPLGSPSPSPSP 308
Query: 66 GHDVEAYCLLCECRYEER 83
+ + L CE RY R
Sbjct: 309 PYTLMGCRLACETRYVAR 326
>gi|9998948 amiloride-sensitive cation channel 3 isoform c [Homo
sapiens]
Length = 543
Score = 27.3 bits (59), Expect = 7.5
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 6 LVAVVGCLLVPPAEANKSSEDIRCKCICPPYRNISGHIYNQNVSQKDCNCLHVVEPMPVP 65
++ +G + P + S + + + PP+ + S N N + + L P P P
Sbjct: 249 IIDQLGLGVSPGYQTFVSCQQQQLSFLPPPWGDCSSASLNPNYEPEPSDPLGSPSPSPSP 308
Query: 66 GHDVEAYCLLCECRYEER 83
+ + L CE RY R
Sbjct: 309 PYTLMGCRLACETRYVAR 326
>gi|222352177 nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor-like 1 isoform 3 [Homo
sapiens]
Length = 358
Score = 26.9 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
A++++L E + + A S PRA EG+ Q W+ Q +EQR
Sbjct: 177 AWSDRLAREHAQKCQQQQREAEGSRRPPRA-------EGSSQSWRQQEEEQR 221
>gi|125628636 keratin 80 isoform a [Homo sapiens]
Length = 452
Score = 26.9 bits (58), Expect = 9.8
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 111 LVDPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQE 170
L+ PL K D +QL N+E+ E+ +++ ASL G + + +R + + RW +Q
Sbjct: 64 LLVPLDVKLDPAVQQLKNQEK-EEMKALNDKFASLIG-KVQALEQRNQLLETRWSF-LQG 120
Query: 171 QRKTVFD 177
Q +FD
Sbjct: 121 QDSAIFD 127
>gi|125628632 keratin 80 isoform b [Homo sapiens]
Length = 422
Score = 26.9 bits (58), Expect = 9.8
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 111 LVDPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQE 170
L+ PL K D +QL N+E+ E+ +++ ASL G + + +R + + RW +Q
Sbjct: 64 LLVPLDVKLDPAVQQLKNQEK-EEMKALNDKFASLIG-KVQALEQRNQLLETRWSF-LQG 120
Query: 171 QRKTVFD 177
Q +FD
Sbjct: 121 QDSAIFD 127
>gi|222352179 nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor-like 1 isoform 4 [Homo
sapiens]
Length = 343
Score = 26.9 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
A++++L E + + A S PRA EG+ Q W+ Q +EQR
Sbjct: 162 AWSDRLAREHAQKCQQQQREAEGSRRPPRA-------EGSSQSWRQQEEEQR 206
>gi|222352175 nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor-like 1 isoform 2 [Homo
sapiens]
Length = 366
Score = 26.9 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
A++++L E + + A S PRA EG+ Q W+ Q +EQR
Sbjct: 185 AWSDRLAREHAQKCQQQQREAEGSRRPPRA-------EGSSQSWRQQEEEQR 229
>gi|222352173 nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor-like 1 isoform 1 [Homo
sapiens]
Length = 381
Score = 26.9 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 121 AYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
A++++L E + + A S PRA EG+ Q W+ Q +EQR
Sbjct: 200 AWSDRLAREHAQKCQQQQREAEGSRRPPRA-------EGSSQSWRQQEEEQR 244
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 26.9 bits (58), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 117 RKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERV 157
R+ A TE+ ++ NE R A A++ GP T +E +
Sbjct: 613 RRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEI 653
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 26.9 bits (58), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 117 RKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERV 157
R+ A TE+ ++ NE R A A++ GP T +E +
Sbjct: 613 RRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEI 653
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 26.9 bits (58), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 117 RKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERV 157
R+ A TE+ ++ NE R A A++ GP T +E +
Sbjct: 613 RRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEI 653
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,274,914
Number of Sequences: 37866
Number of extensions: 297238
Number of successful extensions: 974
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 962
Number of HSP's gapped (non-prelim): 24
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.