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Search of human proteins with 7705897
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705897 kynurenine aminotransferase II [Homo sapiens]
(425 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705897 kynurenine aminotransferase II [Homo sapiens] 855 0.0
gi|33469970 kynurenine aminotransferase II [Homo sapiens] 855 0.0
gi|56713254 kynurenine aminotransferase III isoform 1 [Homo sapi... 54 3e-07
gi|56713256 kynurenine aminotransferase III isoform 2 [Homo sapi... 54 3e-07
gi|169881279 kynurenine aminotransferase I isoform a [Homo sapiens] 47 3e-05
gi|95147551 kynurenine aminotransferase I isoform a [Homo sapiens] 47 3e-05
gi|4507369 tyrosine aminotransferase [Homo sapiens] 45 2e-04
gi|169881281 kynurenine aminotransferase I isoform b [Homo sapiens] 37 0.026
gi|28373101 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans... 33 0.38
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 32 0.84
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 32 0.84
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 32 0.84
gi|38505226 E2F family member 8 [Homo sapiens] 32 0.84
gi|149944424 1-aminocyclopropane-1-carboxylate synthase homolog ... 32 1.4
gi|242332527 hypothetical protein LOC65250 [Homo sapiens] 31 1.9
gi|5454152 ubiquinol-cytochrome c reductase binding protein [Hom... 31 2.4
gi|113417284 PREDICTED: similar to ubiquinol-cytochrome c reduct... 30 4.2
gi|113416816 PREDICTED: similar to ubiquinol-cytochrome c reduct... 30 4.2
gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo ... 29 7.1
gi|23397678 signal transducer and activator of transcription 6 [... 29 9.3
>gi|7705897 kynurenine aminotransferase II [Homo sapiens]
Length = 425
Score = 855 bits (2208), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT 60
MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT
Sbjct: 1 MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT 60
Query: 61 IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG 120
IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG
Sbjct: 61 IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG 120
Query: 121 LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP 180
LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP
Sbjct: 121 LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP 180
Query: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 241 FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ 300
FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ
Sbjct: 241 FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ 300
Query: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV 360
LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV 360
Query: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL 420
KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL
Sbjct: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL 420
Query: 421 IKESL 425
IKESL
Sbjct: 421 IKESL 425
>gi|33469970 kynurenine aminotransferase II [Homo sapiens]
Length = 425
Score = 855 bits (2208), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT 60
MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT
Sbjct: 1 MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKT 60
Query: 61 IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG 120
IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG
Sbjct: 61 IQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQG 120
Query: 121 LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP 180
LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP
Sbjct: 121 LCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP 180
Query: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 241 FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ 300
FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ
Sbjct: 241 FRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ 300
Query: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV 360
LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV 360
Query: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL 420
KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL
Sbjct: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL 420
Query: 421 IKESL 425
IKESL
Sbjct: 421 IKESL 425
>gi|56713254 kynurenine aminotransferase III isoform 1 [Homo
sapiens]
Length = 454
Score = 53.9 bits (128), Expect = 3e-07
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 73 QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPG 132
QY+ G P L+ L L KL+ ++ VT G+ L + +I+ G
Sbjct: 96 QYTRGFGHPSLVKALSYLYEKLYQKQI------DSNKEILVTVGAYGSLFNTIQALIDEG 149
Query: 133 DNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILS-RWKPED-AKNPQKNT 190
D V+L P Y P+ + +A +P + + RW D +PQ+
Sbjct: 150 DEVILIVPFYD----CYEPM----VRMAGATPVFIPLRSKPVYGKRWSSSDWTLDPQELE 201
Query: 191 PKF-----LYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFN---KFR 242
KF + +NP G E + I +L KYD L I D+ Y +L ++ +
Sbjct: 202 SKFNSKTKAIILNTPHNPLGKVYNREELQVIADLCIKYDTLCISDEVYEWLVYSGNKHLK 261
Query: 243 VPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLH 294
+ TF M R I S K S +G ++G+ GP LI+ + +Q +T++
Sbjct: 262 IATFPGM--WERTITIGSAGKTFSVTGWKLGWSIGPNHLIKH-LQTVQQNTIY 311
>gi|56713256 kynurenine aminotransferase III isoform 2 [Homo
sapiens]
Length = 420
Score = 53.9 bits (128), Expect = 3e-07
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 73 QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPG 132
QY+ G P L+ L L KL+ ++ VT G+ L + +I+ G
Sbjct: 62 QYTRGFGHPSLVKALSYLYEKLYQKQI------DSNKEILVTVGAYGSLFNTIQALIDEG 115
Query: 133 DNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILS-RWKPED-AKNPQKNT 190
D V+L P Y P+ + +A +P + + RW D +PQ+
Sbjct: 116 DEVILIVPFYD----CYEPM----VRMAGATPVFIPLRSKPVYGKRWSSSDWTLDPQELE 167
Query: 191 PKF-----LYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFN---KFR 242
KF + +NP G E + I +L KYD L I D+ Y +L ++ +
Sbjct: 168 SKFNSKTKAIILNTPHNPLGKVYNREELQVIADLCIKYDTLCISDEVYEWLVYSGNKHLK 227
Query: 243 VPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLH 294
+ TF M R I S K S +G ++G+ GP LI+ + +Q +T++
Sbjct: 228 IATFPGM--WERTITIGSAGKTFSVTGWKLGWSIGPNHLIKH-LQTVQQNTIY 277
>gi|169881279 kynurenine aminotransferase I isoform a [Homo sapiens]
Length = 422
Score = 47.4 bits (111), Expect = 3e-05
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD 169
++ VT G L F+ +++ GD V++ EP + G + V S + G + +
Sbjct: 93 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQN 151
Query: 170 SLRDILSRWKPEDAKNPQKNTPKFLYTVPNG-NNPTGNSLTSERKKEIYELARKYDFLII 228
S W+ + + K T + V N NNP G + E + + L +++D + I
Sbjct: 152 GELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCI 211
Query: 229 EDDPYYFLQFNKFRVPTFLSMD-VDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVIL 286
D+ Y ++ ++ + + S+ + R + S K S+ G ++G++ GP +++ +
Sbjct: 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT 271
Query: 287 HIQVSTLHPSTFNQLMISQ 305
Q S H T +Q +++
Sbjct: 272 VHQNSVFHCPTQSQAAVAE 290
>gi|95147551 kynurenine aminotransferase I isoform a [Homo sapiens]
Length = 422
Score = 47.4 bits (111), Expect = 3e-05
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD 169
++ VT G L F+ +++ GD V++ EP + G + V S + G + +
Sbjct: 93 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQN 151
Query: 170 SLRDILSRWKPEDAKNPQKNTPKFLYTVPNG-NNPTGNSLTSERKKEIYELARKYDFLII 228
S W+ + + K T + V N NNP G + E + + L +++D + I
Sbjct: 152 GELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCI 211
Query: 229 EDDPYYFLQFNKFRVPTFLSMD-VDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVIL 286
D+ Y ++ ++ + + S+ + R + S K S+ G ++G++ GP +++ +
Sbjct: 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT 271
Query: 287 HIQVSTLHPSTFNQLMISQ 305
Q S H T +Q +++
Sbjct: 272 VHQNSVFHCPTQSQAAVAE 290
>gi|4507369 tyrosine aminotransferase [Homo sapiens]
Length = 454
Score = 44.7 bits (104), Expect = 2e-04
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 43/275 (15%)
Query: 12 AARNPSPIRTMTDILSRGP---KSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMM 68
A + +PIR + D + P K+MISL+ G +P +F N T + M
Sbjct: 49 AKKTFNPIRAIVDNMKVKPNPNKTMISLSIG--DPTVFG---------NLPTDPEVTQAM 97
Query: 69 KRALQ------YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLC 122
K AL Y+PS G LS +++ H P P + + D+ +TSG Q +
Sbjct: 98 KDALDSGKYNGYAPSIGF---LSSREEIASYYHCPEA----PLEAK-DVILTSGCSQAID 149
Query: 123 KVFEMIINPGDNVLLDEPAYS--GTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKP 180
++ NPG N+L+ P +S TL + + N+ ++S + + L K
Sbjct: 150 LCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKT 209
Query: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
V N +NP G+ + ++I +A + I+ D+ Y + F+
Sbjct: 210 A------------CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSD 257
Query: 241 FRVPTFLSMDVDGRVIRADSFSK-IISSGLRIGFL 274
+ ++ D ++ +K + G R+G++
Sbjct: 258 CKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWI 292
>gi|169881281 kynurenine aminotransferase I isoform b [Homo sapiens]
Length = 372
Score = 37.4 bits (85), Expect = 0.026
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 176 SRWKPEDAKNPQKNTPKFLYTVPNG-NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY 234
S W+ + + K T + V N NNP G + E + + L +++D + I D+ Y
Sbjct: 108 SNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ 167
Query: 235 FLQFNKFRVPTFLSMD-VDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVILHIQVST 292
++ ++ + + S+ + R + S K S+ G ++G++ GP +++ + Q S
Sbjct: 168 WMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSV 227
Query: 293 LHPSTFNQLMISQ 305
H T +Q +++
Sbjct: 228 FHCPTQSQAAVAE 240
>gi|28373101 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 5 [Homo sapiens]
Length = 376
Score = 33.5 bits (75), Expect = 0.38
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 189 NTPKFLYTVPNGNNPTGNSLTSERKKE-IYELARKYDFLIIEDDPYYFLQFNKFRVPTFL 247
N P FL+T N P G L E IY + ++ + +D PYY QF K V
Sbjct: 112 NAPAFLFTTQK-NTPLGTKLKYEVDTSGIYHINQEIFRMFPKDMPYYRSQFKKCAVVG-- 168
Query: 248 SMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLL 307
+G +++ + I+S + F P+ E+ + + V T T N +I++
Sbjct: 169 ----NGGILKNSRCGREINSADFV-FRCNLPPISEKYTMDVGVKT-DVVTVNPSIITERF 222
Query: 308 HEWGEEGFMAHVDRVIDFYSN 328
H+ E + RV+ Y N
Sbjct: 223 HKL--EKWRRPFYRVLQVYEN 241
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 32.3 bits (72), Expect = 0.84
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 65 EEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKV 124
EE ++R L PS + E + W LQ PP + PP+ L G+ G ++
Sbjct: 147 EEELQRML---PSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFREL 203
Query: 125 FEMIINPG 132
++ PG
Sbjct: 204 LSEVLEPG 211
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 32.3 bits (72), Expect = 0.84
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 65 EEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKV 124
EE ++R L PS + E + W LQ PP + PP+ L G+ G ++
Sbjct: 147 EEELQRML---PSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFREL 203
Query: 125 FEMIINPG 132
++ PG
Sbjct: 204 LSEVLEPG 211
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 32.3 bits (72), Expect = 0.84
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 65 EEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKV 124
EE ++R L PS + E + W LQ PP + PP+ L G+ G ++
Sbjct: 147 EEELQRML---PSLSLTEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFREL 203
Query: 125 FEMIINPG 132
++ PG
Sbjct: 204 LSEVLEPG 211
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 32.3 bits (72), Expect = 0.84
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 145 TLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPT 204
TLQ L + N+ AS SGIVP S R PE+A Q + VP + P
Sbjct: 737 TLQHLGLISPNVQLSASPGSGIVPVSPRIESVNVAPENAGTQQGRATNYDSPVPGQSQPN 796
Query: 205 GNSLTSERKKEIYELARKYDFLIIE 229
G S+ ++ + K L+ E
Sbjct: 797 GQSVAVTGAQQPVPVTPKGSQLVAE 821
>gi|149944424 1-aminocyclopropane-1-carboxylate synthase homolog
(Arabidopsis)(non-functional)-like [Homo sapiens]
Length = 568
Score = 31.6 bits (70), Expect = 1.4
Identities = 63/280 (22%), Positives = 114/280 (40%), Gaps = 29/280 (10%)
Query: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSG-TLQSLHPLGCNIINVASDESGIVP 168
++ V +G C + ++ +PG+ L+ P Y G S +I V + V
Sbjct: 235 NVVVLNGCCSVFCALAMVLCDPGEAFLVPAPFYGGFAFSSRLYAKVELIPVHLESEVTVT 294
Query: 169 DSLRDILSRWKPEDAKNPQKNTPKFL--YTVPNGNNPTGNSLTSERKKEIYELARKYDFL 226
++ L+ K E+A + K + + N NP G+ + + + E A++Y+
Sbjct: 295 NTHPFQLTVDKLEEALLEARLEGKKVRGLVLINPQNPLGDIYSPDSLMKYLEFAKRYNLH 354
Query: 227 IIEDDPYYFLQFNK-FRVPTFLSM----DVDGRVIRADSFSKIISSGLRIGFL-TGPKPL 280
+I D+ Y F++ + LSM D + + + SG R G L T K +
Sbjct: 355 VIIDEIYMLSVFDESITFHSILSMKSLPDSNRTHVIWGTSKDFGISGFRFGALYTHNKEV 414
Query: 281 IERVILHIQVSTLHPSTFNQLMISQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAAAD 338
V + ++ S Q + QLL EW +D+V Y L A
Sbjct: 415 ASAVSAFGYLHSI--SGITQHKLCQLLQNTEW--------IDKV---YLPTNCYRLREAH 461
Query: 339 KWLTGLAE-----WHVPAAGMFLWIKVKGINDVKELIEEK 373
K++T + +H ++G+++WI +K D EE+
Sbjct: 462 KYITAELKALEIPFHNRSSGLYVWINLKKYLDPCTFEEER 501
>gi|242332527 hypothetical protein LOC65250 [Homo sapiens]
Length = 3197
Score = 31.2 bits (69), Expect = 1.9
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Query: 165 GIVPDSLRDILSRW--KP----EDAKNPQKNTPKFLY-TVPNGNNPTGN 206
G V DS +++ R+ KP E+A+ P+KN+P T+P+G N TGN
Sbjct: 2104 GDVEDSNKNLKERFFIKPQSMGENAREPRKNSPHCHEGTIPSGQNSTGN 2152
>gi|5454152 ubiquinol-cytochrome c reductase binding protein [Homo
sapiens]
Length = 111
Score = 30.8 bits (68), Expect = 2.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 334 LAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAF 387
++A+ KWL G+ +W+ AAG G+ + E++ VK + LP N +
Sbjct: 7 VSASGKWLDGIRKWYYNAAG----FNKLGLMRDDTIYEDEDVKEAIRRLPENLY 56
>gi|113417284 PREDICTED: similar to ubiquinol-cytochrome c reductase
binding protein [Homo sapiens]
Length = 111
Score = 30.0 bits (66), Expect = 4.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 334 LAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAF 387
+AA+ KWL G+ +W+ A G G+ + E + VK + LP N +
Sbjct: 7 VAASGKWLDGIRKWYYNATG----FNKLGLMKDDTIYENEDVKEAIRRLPENLY 56
>gi|113416816 PREDICTED: similar to ubiquinol-cytochrome c reductase
binding protein [Homo sapiens]
Length = 111
Score = 30.0 bits (66), Expect = 4.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 334 LAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAF 387
+AA+ KWL G+ +W+ A G G+ + E + VK + LP N +
Sbjct: 7 VAASGKWLDGIRKWYYNATG----FNKLGLMKDDTIYENEDVKEAIRRLPENLY 56
>gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo
sapiens]
Length = 2243
Score = 29.3 bits (64), Expect = 7.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 171 LRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY 223
L+D L WK E K P + Y V N G S+ +K + LA+KY
Sbjct: 1279 LKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKIRKAYFRLAQKY 1331
>gi|23397678 signal transducer and activator of transcription 6
[Homo sapiens]
Length = 847
Score = 28.9 bits (63), Expect = 9.3
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 40 LPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSP-SAGIPELLSWLKQLQIKL---H 95
L P M P + ++ ++Q G +M+ + Y P S IP + + +
Sbjct: 661 LQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQV--YPPHSHSIPPYQGLSPEESVNVLSAF 718
Query: 96 NPPTIHYPPSQGQMDLCVTSGSQQGL--CKVFEMIINPGDNVLLDE 139
P + PPS GQM L QGL C+ E ++ D +L +
Sbjct: 719 QEPHLQMPPSLGQMSLPFDQPHPQGLLPCQPQEHAVSSPDPLLCSD 764
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,950,971
Number of Sequences: 37866
Number of extensions: 789790
Number of successful extensions: 1779
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1765
Number of HSP's gapped (non-prelim): 20
length of query: 425
length of database: 18,247,518
effective HSP length: 105
effective length of query: 320
effective length of database: 14,271,588
effective search space: 4566908160
effective search space used: 4566908160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.