Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 14043022
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14043022 methionyl-tRNA synthetase [Homo sapiens]
(900 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14043022 methionyl-tRNA synthetase [Homo sapiens] 1834 0.0
gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens] 126 8e-29
gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens] 47 8e-05
gi|5454158 valyl-tRNA synthetase [Homo sapiens] 43 0.002
gi|6996014 histidyl-tRNA synthetase [Homo sapiens] 40 0.007
gi|7661872 leucyl-tRNA synthetase 2, mitochondrial precursor [Ho... 38 0.037
gi|47419916 tryptophanyl-tRNA synthetase isoform a [Homo sapiens] 38 0.037
gi|47419914 tryptophanyl-tRNA synthetase isoform a [Homo sapiens] 38 0.037
gi|4503481 eukaryotic translation elongation factor 1 gamma [Hom... 38 0.048
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 37 0.11
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 37 0.11
gi|38488767 microtubule associated serine/threonine kinase famil... 34 0.54
gi|12025678 actinin, alpha 4 [Homo sapiens] 34 0.70
gi|30089948 protein phosphatase 1E [Homo sapiens] 33 0.91
gi|116256333 membrane metallo-endopeptidase [Homo sapiens] 33 1.2
gi|116256331 membrane metallo-endopeptidase [Homo sapiens] 33 1.2
gi|116256327 membrane metallo-endopeptidase [Homo sapiens] 33 1.2
gi|116256329 membrane metallo-endopeptidase [Homo sapiens] 33 1.2
gi|198041678 solute carrier family 12 (potassium-chloride transp... 32 2.0
gi|11968148 solute carrier family 12 (potassium-chloride transpo... 32 2.0
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 32 2.0
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 32 2.7
gi|167466164 glutathione S-transferase theta 1 [Homo sapiens] 31 4.5
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 31 4.5
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 31 4.5
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 31 4.5
gi|239755252 PREDICTED: hypothetical protein [Homo sapiens] 31 5.9
gi|169201936 PREDICTED: hypothetical protein [Homo sapiens] 31 5.9
gi|169191966 PREDICTED: hypothetical protein [Homo sapiens] 31 5.9
gi|94721239 isoleucine tRNA synthetase [Homo sapiens] 31 5.9
>gi|14043022 methionyl-tRNA synthetase [Homo sapiens]
Length = 900
Score = 1834 bits (4751), Expect = 0.0
Identities = 900/900 (100%), Positives = 900/900 (100%)
Query: 1 MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLF 60
MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLF
Sbjct: 1 MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGNYLF 60
Query: 61 STSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRA 120
STSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRA
Sbjct: 61 STSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRA 120
Query: 121 LTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQE 180
LTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQE
Sbjct: 121 LTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQE 180
Query: 181 PCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAW 240
PCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAW
Sbjct: 181 PCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAW 240
Query: 241 EKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRL 300
EKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRL
Sbjct: 241 EKGLESLPPLRPQQNPVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRL 300
Query: 301 RQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTP 360
RQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTP
Sbjct: 301 RQWNTLYLCGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTP 360
Query: 361 QQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDK 420
QQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDK
Sbjct: 361 QQTKITQDIFQQLLKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDK 420
Query: 421 CGKLINAVELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQF 480
CGKLINAVELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQF
Sbjct: 421 CGKLINAVELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQF 480
Query: 481 ITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWW 540
ITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWW
Sbjct: 481 ITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWW 540
Query: 541 KNPEQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGV 600
KNPEQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGV
Sbjct: 541 KNPEQVDLYQFMAKDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGV 600
Query: 601 GVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMF 660
GVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMF
Sbjct: 601 GVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMF 660
Query: 661 VSKFFGGYVPEMVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQ 720
VSKFFGGYVPEMVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQ
Sbjct: 661 VSKFFGGYVPEMVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQ 720
Query: 721 VNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSI 780
VNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSI
Sbjct: 721 VNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSI 780
Query: 781 LLTNFLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQAKTSPKPAVVETVTTAKPQ 840
LLTNFLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQAKTSPKPAVVETVTTAKPQ
Sbjct: 781 LLTNFLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQAKTSPKPAVVETVTTAKPQ 840
Query: 841 QIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEAPKGKKKK 900
QIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEAPKGKKKK
Sbjct: 841 QIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEAPKGKKKK 900
>gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens]
Length = 593
Score = 126 bits (317), Expect = 8e-29
Identities = 129/524 (24%), Positives = 209/524 (39%), Gaps = 53/524 (10%)
Query: 269 TSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTL---YLCGTDEYGTATETKALEE 325
T+ + YVN PH+G++ +L AD R+ RLR +T + GTDE+G + A
Sbjct: 48 TTPIFYVNAAPHIGHLYSALL-ADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAAATA 106
Query: 326 GLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQDTVE 385
GL P E+CD+ +++ IS F RTT + Q + L RG + + E
Sbjct: 107 GLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKGVYE 166
Query: 386 QLRCEHCARFLADRFVEGVCPFCGYEEARGDQCDKCGKLINAVELKKPQCKVCRSCPVVQ 445
C FL + V GD + + V K + + R
Sbjct: 167 GWYCASDECFLPEAKVTQ------QPGPSGDSFPVSLESGHPVSWTKEENYIFR------ 214
Query: 446 SSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITR---DLKWG 502
L + K L+ WL R P + + WL + L ++R L WG
Sbjct: 215 --------LSQFRKPLQRWL-RGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWG 265
Query: 503 TPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPEQVDLYQFMAKDNVPFHSL 562
PVP G + + YVW DA + YL++ +++ WW + + KD + FH++
Sbjct: 266 IPVP--GDDSQTIYVWLDALVNYLTVIGYPNAEFKSWWPATSHI-----IGKDILKFHAI 318
Query: 563 VFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYLL 622
+P LGA + + + K SKS G V D +R++LL
Sbjct: 319 YWPAFLLGA--GMSPPQRICVHSHWTVCGQKMSKSLG-NVVDPRTCLNRYTVDGFRYFLL 375
Query: 623 YIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGM-----------FVSKFF----GG 667
D + ++ NSEL + LG +NR F + F G
Sbjct: 376 RQGVPNWDCDYYDEKVVKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTCFPSEPGL 435
Query: 668 YVPEMVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKR 727
P + +D L++ V + + RI AL ++ + R N ++Q + PWK
Sbjct: 436 VGPSVRAQAEDYALVSAVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKL 495
Query: 728 IKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQL 771
S D GTV +A+ + +LQP P+++ + ++L
Sbjct: 496 NWESPVDAPWLGTVLHVALECLRVFGTLLQPVTPSLADKLLSRL 539
>gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]
Length = 1512
Score = 47.0 bits (110), Expect = 8e-05
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 786 LCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQAKTSPKPAVVETVTTAKPQQIQAL 845
L +P GH P E ++E+ + K P P++ TT++ + L
Sbjct: 699 LIYIPDGHT--KEMPTSGSKEKTKVEATKNETSA-PFKERPTPSLNNNCTTSEDSLV--L 753
Query: 846 MDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLK---KQLAVAEGKPPEAP 894
+ V QG++VRELKA+KA K +V A V +LL LK K+ E KP P
Sbjct: 754 YNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQEYKPGNPP 805
Score = 45.4 bits (106), Expect = 2e-04
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 13/81 (16%)
Query: 827 KPAVVETVTTAKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLK---KQL 883
+PA +ET + + L D+V QG +VR+LK +KA K++V V +LL LK K L
Sbjct: 892 EPAGLET------PEAKVLFDKVASQGEVVRKLKTEKAPKDQVDIAVQELLQLKAQYKSL 945
Query: 884 AVAEGKPPEA----PKGKKKK 900
E KP A K KKKK
Sbjct: 946 IGVEYKPVSATGAEDKDKKKK 966
Score = 40.8 bits (94), Expect = 0.006
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 831 VETVTTAKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGK 889
+ + ++A + ++L DEV QG +VR+LKA+K+ K ++ V LL LK Q GK
Sbjct: 812 ISSNSSASILESKSLYDEVAAQGEVVRKLKAEKSPKAKINEAVECLLSLKAQYKEKTGK 870
>gi|5454158 valyl-tRNA synthetase [Homo sapiens]
Length = 1264
Score = 42.7 bits (99), Expect = 0.002
Identities = 88/400 (22%), Positives = 150/400 (37%), Gaps = 77/400 (19%)
Query: 17 AAAGRARGRAEVLISTVGPEDCVVPFLTRPKVPVLQLDSGN-YLFSTSAICRYFFLLS-- 73
A G G A I P PF P++P L+ G +++ +A+ + +
Sbjct: 27 AGEGPGWGGAHPRICLQPPPTSRTPF-PPPRLPALEQGPGGLWVWGATAVAQLLWPAGLG 85
Query: 74 ---GWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGED---VLGSVRRALTHIDHS 127
G L QW+ + TEL PA A + +D VLG++ RAL+ ++
Sbjct: 86 GPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRSSAQDPQAVLGALGRALSPLEEW 145
Query: 128 LSRQNCPFLAGETESLADIVLWGAL---YPLLQDPAYLPEELSALHSWFQTLSTQEPCQR 184
L +LAGE +LAD+ AL + + DP + + WF T Q +
Sbjct: 146 LRLHT--YLAGEAPTLADLAAVTALLLPFRYVLDPP-ARRIWNNVTRWFVTCVRQPEFRA 202
Query: 185 AAETVLKQQGVLAL------------------------RPYLQK--------QPQPSPAE 212
V+ G L R L+K Q QP P E
Sbjct: 203 VLGEVVLYSGARPLSHQPGPEAPALPKTAAQLKKEAKKREKLEKFQQKQKIQQQQPPPGE 262
Query: 213 GRAVTNEPEEEELATLS---------EEEIA----------MAVTAWEKGLESLPPLRPQ 253
+ + E+ + ++ +++++ AW E +P+
Sbjct: 263 KKPKPEKREKRDPGVITYDLPTPPGEKKDVSGPMPDSYSPRYVEAAWYPWWEQQGFFKPE 322
Query: 254 Q-NPVLPVAGERNV-LITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGT 311
P + A R V ++ P V HLG+ + + D R+ R+R TL+ G
Sbjct: 323 YGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQ-DSLTRWHRMRGETTLWNPGC 381
Query: 312 DEYGTATET---KAL--EEGLTPQEICDKYHIIHADIYRW 346
D G AT+ K L E+GL+ ++ + + ++++W
Sbjct: 382 DHAGIATQVVVEKKLWREQGLSRHQLGREAFL--QEVWKW 419
>gi|6996014 histidyl-tRNA synthetase [Homo sapiens]
Length = 509
Score = 40.4 bits (93), Expect = 0.007
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 843 QALMDEVTK-QGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPP---EAPKGKK 898
+A ++E+ K QG VR LK QKA + EVAKLL LK QL E K + PKG +
Sbjct: 4 RAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTR 63
>gi|7661872 leucyl-tRNA synthetase 2, mitochondrial precursor [Homo
sapiens]
Length = 903
Score = 38.1 bits (87), Expect = 0.037
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 268 ITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEEGL 327
+ S PY + H+G++ +S D AR+ ++R + G D +G E A+E L
Sbjct: 86 VLSMFPYPSGKLHMGHVRVYTIS-DTIARFQKMRGMQVINPMGWDAFGLPAENAAVERNL 144
Query: 328 TPQEICDK--YHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRGFVLQ 381
PQ H+ S+D T P K TQ +F +L + G Q
Sbjct: 145 HPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 200
>gi|47419916 tryptophanyl-tRNA synthetase isoform a [Homo sapiens]
Length = 471
Score = 38.1 bits (87), Expect = 0.037
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 837 AKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEA 893
++P + L + + QG +VR LKA A K+E+ + V L+ LK A G+ +A
Sbjct: 4 SEPASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGEDYKA 60
>gi|47419914 tryptophanyl-tRNA synthetase isoform a [Homo sapiens]
Length = 471
Score = 38.1 bits (87), Expect = 0.037
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 837 AKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPEA 893
++P + L + + QG +VR LKA A K+E+ + V L+ LK A G+ +A
Sbjct: 4 SEPASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLVSLKMSYKAAAGEDYKA 60
>gi|4503481 eukaryotic translation elongation factor 1 gamma [Homo
sapiens]
Length = 437
Score = 37.7 bits (86), Expect = 0.048
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 47 KVPVLQLDSGNYLFSTSAICRYF----FLLSGWEQDDLTNQWLEWEATELQPALSAALY- 101
KVP + D G +F ++AI Y S E QW+ + +++ P S ++
Sbjct: 57 KVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFP 116
Query: 102 --YLVVQGKKG-EDVLGSVRRALTHIDHSLSRQNCPFLAGETESLADI-----VLWGALY 153
++ K+ E+ VRR L +D L + FL GE +LADI +LW LY
Sbjct: 117 TLGIMHHNKQATENAKEEVRRILGLLDAYLKTRT--FLVGERVTLADITVVCTLLW--LY 172
Query: 154 PLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETV--LKQQGVLALRPYLQKQPQPSPA 211
+ +P++ + + WF T Q + V ++ + + + QP+
Sbjct: 173 KQVLEPSF-RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTP 231
Query: 212 EGRAVTNEPEEEELATLSEEEIAMA 236
+ E +++ A EE+ A A
Sbjct: 232 RKEKGSREEKQKPQAERKEEKKAAA 256
>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
Length = 1184
Score = 36.6 bits (83), Expect = 0.11
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 206 PQPSPAEGRAVTNEPEEEELATLSEEEIAMA---VTAWEKGLESLPPLRPQQNPVLPVAG 262
P P A+ R VT + EEEE EE+A+ +GL+ LP P P LP+
Sbjct: 263 PAPVQAKARRVTEDSEEEEEEEEEREEMAVTEQLAAGGHRGLDGLPTTAP-AGPSLPIQE 321
Query: 263 ER 264
ER
Sbjct: 322 ER 323
>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
Length = 1231
Score = 36.6 bits (83), Expect = 0.11
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 206 PQPSPAEGRAVTNEPEEEELATLSEEEIAMA---VTAWEKGLESLPPLRPQQNPVLPVAG 262
P P A+ R VT + EEEE EE+A+ +GL+ LP P P LP+
Sbjct: 263 PAPVQAKARRVTEDSEEEEEEEEEREEMAVTEQLAAGGHRGLDGLPTTAP-AGPSLPIQE 321
Query: 263 ER 264
ER
Sbjct: 322 ER 323
>gi|38488767 microtubule associated serine/threonine kinase family
member 4 isoform b [Homo sapiens]
Length = 250
Score = 34.3 bits (77), Expect = 0.54
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 175 TLSTQEPCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTNEPEEEEL 225
TL + P A +VL ++GVLAL P L P G + + E ++EEL
Sbjct: 72 TLGARAPAAWAPASVLLERGVLALPPPLPGGAVPPAPRGSSASQEEQDEEL 122
>gi|12025678 actinin, alpha 4 [Homo sapiens]
Length = 911
Score = 33.9 bits (76), Expect = 0.70
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 436 KVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLP 470
++C+ V Q ++HL D KL L EW+ RT+P
Sbjct: 280 RICKVLAVNQENEHLMEDYEKLASDLLEWIRRTIP 314
>gi|30089948 protein phosphatase 1E [Homo sapiens]
Length = 755
Score = 33.5 bits (75), Expect = 0.91
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 177 STQEPCQRAAETVLKQQGVLALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMA 236
S +EP + AA ++G ++ P P E AV E EEE AT
Sbjct: 62 SVEEPGEEAATVAATEEG--------DQEQDPEPEEEAAVEGEEEEEGAAT--------- 104
Query: 237 VTAWEKGLESLPPLRPQQNPVLPV 260
A G ++PP PQ P+ P+
Sbjct: 105 -AAAAPGHSAVPPPPPQLPPLPPL 127
>gi|116256333 membrane metallo-endopeptidase [Homo sapiens]
Length = 750
Score = 33.1 bits (74), Expect = 1.2
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 844 ALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPE 892
A +D + ++R+ + D+N++A E+ K+++L+K++A A KP +
Sbjct: 244 AYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPED 292
>gi|116256331 membrane metallo-endopeptidase [Homo sapiens]
Length = 750
Score = 33.1 bits (74), Expect = 1.2
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 844 ALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPE 892
A +D + ++R+ + D+N++A E+ K+++L+K++A A KP +
Sbjct: 244 AYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPED 292
>gi|116256327 membrane metallo-endopeptidase [Homo sapiens]
Length = 750
Score = 33.1 bits (74), Expect = 1.2
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 844 ALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPE 892
A +D + ++R+ + D+N++A E+ K+++L+K++A A KP +
Sbjct: 244 AYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPED 292
>gi|116256329 membrane metallo-endopeptidase [Homo sapiens]
Length = 750
Score = 33.1 bits (74), Expect = 1.2
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 844 ALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVAEGKPPE 892
A +D + ++R+ + D+N++A E+ K+++L+K++A A KP +
Sbjct: 244 AYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPED 292
>gi|198041678 solute carrier family 12 (potassium-chloride
transporter), member 5 isoform 1 [Homo sapiens]
Length = 1139
Score = 32.3 bits (72), Expect = 2.0
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 730 GSEADRQRA---GTVTGLAVNIAALLS------------VMLQPYMPTVSATIQAQLQLP 774
G D Q++ GT+ +A A +S V+ + V+ +
Sbjct: 445 GDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACIEGVVLRDKFGEAVNGNLVVGTLAW 504
Query: 775 PPACSILLTNFLCTLPAGHQIGTVSP-LFQKLENDQIESLRQRFGGGQAKTSPKPAVVET 833
P I++ +F T AG Q T +P L Q + D I Q FG G+A P A++ T
Sbjct: 505 PSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGKANGEPTWALLLT 564
Query: 834 VTTAKPQQIQALMDEV 849
+ + A +DEV
Sbjct: 565 ACICEIGILIASLDEV 580
>gi|11968148 solute carrier family 12 (potassium-chloride
transporter), member 5 isoform 2 [Homo sapiens]
Length = 1116
Score = 32.3 bits (72), Expect = 2.0
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 730 GSEADRQRA---GTVTGLAVNIAALLS------------VMLQPYMPTVSATIQAQLQLP 774
G D Q++ GT+ +A A +S V+ + V+ +
Sbjct: 422 GDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACIEGVVLRDKFGEAVNGNLVVGTLAW 481
Query: 775 PPACSILLTNFLCTLPAGHQIGTVSP-LFQKLENDQIESLRQRFGGGQAKTSPKPAVVET 833
P I++ +F T AG Q T +P L Q + D I Q FG G+A P A++ T
Sbjct: 482 PSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGKANGEPTWALLLT 541
Query: 834 VTTAKPQQIQALMDEV 849
+ + A +DEV
Sbjct: 542 ACICEIGILIASLDEV 557
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
sapiens]
Length = 1478
Score = 32.3 bits (72), Expect = 2.0
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 83 QWLEWEATELQPA---LSAALYYLVVQGKKGEDVLGSVRRALTHIDHSLSRQNCPF---L 136
Q LE E T+++ SA L LV + + ED S+ R L ++ P L
Sbjct: 408 QALERERTKVEEVNRQQSAQLEQLVKELQLKEDARASLER--------LVKEMAPLQEEL 459
Query: 137 AGETESLADIVLWGALYPLLQDPAYLPEELSALHSWFQTLSTQEPCQRAAETVLKQQGVL 196
+G+ + LW L LL + EEL+ L +E Q+ E L +Q V
Sbjct: 460 SGKGQEADQ--LWRRLQELLAHTSSWEEELAELR--------REKKQQQEEKELLEQEVR 509
Query: 197 ALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAWEKGLESLPPLRPQQNP 256
+L LQ + V++ E+++ ++ ++ V E+ L P
Sbjct: 510 SLTRQLQFLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQQVGMLER-------LAGPPGP 562
Query: 257 VLPVAGERN 265
LPVAGE+N
Sbjct: 563 ELPVAGEKN 571
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 32.0 bits (71), Expect = 2.7
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 443 VVQSSQHLFLDLPKLEKRLEEWLGRT--LPGSDWTPNAQFITRS--WLRDGLKPRCITRD 498
V+++S+ F+++ ++ +E L + +PGS + + R W CI+R
Sbjct: 474 VIRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYW--------CISRQ 525
Query: 499 LKWGTPVPLEGFEDKVFYVWFDATIGYL--SITANYTDQWERWWKNPEQV 546
WG P+P+ + K Y+ T ++ + + +D W W PEQ+
Sbjct: 526 RVWGVPIPVFHHKTKDEYLINSQTTEHIVKLVEQHGSDIW--WTLPPEQL 573
Score = 30.4 bits (67), Expect = 7.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 273 PYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTATETKALEE 325
PY N PH+G+ + +L D+ R+ + ++ G D +G E K L E
Sbjct: 116 PYANGDPHVGHALNKILK-DIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSE 167
>gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]
Length = 240
Score = 31.2 bits (69), Expect = 4.5
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 47 KVPVLQLDSGNYLFSTSA-----ICRYFFLLSGWEQDDL-----TNQWLEWEATELQPAL 96
KVP L+ G++ + S + R + + W DL +++L W+ T L+ +
Sbjct: 53 KVPALK--DGDFTLTESVAILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHTTLRRSC 110
Query: 97 SAALYYLVVQGK-KGEDVLGSVRRA-LTHIDHSLSR------QNCPFLAGETESLADIVL 148
AL++ V+ GE V A L +D +L QN FL G SLAD+V
Sbjct: 111 LRALWHKVMFPVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVA 170
Query: 149 WGALYPLLQDPAYLPEELSALHSWFQTLST---QEPCQRAAETVLKQQGVLALRPYLQKQ 205
L + + E L +W Q + ++ Q A E +LK + P ++++
Sbjct: 171 ITELMHPVGAGCQVFEGRPKLATWRQRVEAAVGEDLFQEAHEVILKAKDFPPADPTIKQK 230
Query: 206 PQP 208
P
Sbjct: 231 LMP 233
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 31.2 bits (69), Expect = 4.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 436 KVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPN 477
++C+ V Q ++ L D KL L EW+ RT+P W N
Sbjct: 261 RICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIP---WLEN 299
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 31.2 bits (69), Expect = 4.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 436 KVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPN 477
++C+ V Q ++ L D KL L EW+ RT+P W N
Sbjct: 261 RICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIP---WLEN 299
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 31.2 bits (69), Expect = 4.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 436 KVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPN 477
++C+ V Q ++ L D KL L EW+ RT+P W N
Sbjct: 261 RICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIP---WLEN 299
>gi|239755252 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 30.8 bits (68), Expect = 5.9
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 421 CGKLINAV-ELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQ 479
C + +NA EL P +CR D E RL + G +WT A
Sbjct: 233 CQEALNAERELCHPDTDLCR------------FDATDEELRLCQACGFEFDMCEWTSEAS 280
Query: 480 FITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTD 534
SW+R K R I TP +G +D+ +YVW A G+ T N+ D
Sbjct: 281 AGQISWMRT--KAREIPAFES--TPQQDQGGDDEGYYVWVGAKHGF---TLNHLD 328
>gi|169201936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 30.8 bits (68), Expect = 5.9
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 421 CGKLINAV-ELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQ 479
C + +NA EL P +CR D E RL + G +WT A
Sbjct: 233 CQEALNAERELCHPDTDLCR------------FDATDEELRLCQACGFEFDMCEWTSEAS 280
Query: 480 FITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTD 534
SW+R K R I TP +G +D+ +YVW A G+ T N+ D
Sbjct: 281 AGQISWMRT--KAREIPAFES--TPQQDQGGDDEGYYVWVGAKHGF---TLNHLD 328
>gi|169191966 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 30.8 bits (68), Expect = 5.9
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 421 CGKLINAV-ELKKPQCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQ 479
C + +NA EL P +CR D E RL + G +WT A
Sbjct: 233 CQEALNAERELCHPDTDLCR------------FDATDEELRLCQACGFEFDMCEWTSEAS 280
Query: 480 FITRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTD 534
SW+R K R I TP +G +D+ +YVW A G+ T N+ D
Sbjct: 281 AGQISWMRT--KAREIPAFES--TPQQDQGGDDEGYYVWVGAKHGF---TLNHLD 328
>gi|94721239 isoleucine tRNA synthetase [Homo sapiens]
Length = 1262
Score = 30.8 bits (68), Expect = 5.9
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 450 LFLDLPKLEKRLEEWLGRTLPGSD---WTPNAQFITR--SWLRDGLKPRCITRDLKWGTP 504
++ +P R+E + + L +D W P R +WL+D + I+R+ WGTP
Sbjct: 408 IYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDA-RDWTISRNRYWGTP 466
Query: 505 VPL---EGFEDKV 514
+PL + FE+ V
Sbjct: 467 IPLWVSDDFEEVV 479
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,905,256
Number of Sequences: 37866
Number of extensions: 1663292
Number of successful extensions: 4987
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4949
Number of HSP's gapped (non-prelim): 51
length of query: 900
length of database: 18,247,518
effective HSP length: 111
effective length of query: 789
effective length of database: 14,044,392
effective search space: 11081025288
effective search space used: 11081025288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.