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Search of human proteins with 76781492
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo
sapiens]
(422 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo s... 842 0.0
gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1... 152 4e-37
gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2 ... 138 8e-33
gi|6857800 interferon stimulated exonuclease [Homo sapiens] 114 1e-25
gi|188536114 PAN2 polyA specific ribonuclease subunit homolog is... 65 2e-10
gi|188536112 PAN2 polyA specific ribonuclease subunit homolog is... 65 2e-10
gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens] 64 3e-10
gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens] 64 3e-10
gi|145199237 transcription elongation factor B polypeptide 3 bin... 58 2e-08
gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo ... 56 5e-08
gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo ... 56 5e-08
gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo ... 56 5e-08
gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo ... 56 5e-08
gi|239743594 PREDICTED: hypothetical protein XP_002342913, parti... 56 5e-08
gi|126273519 exonuclease GOR [Homo sapiens] 56 5e-08
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 50 5e-06
gi|104526627 triadin [Homo sapiens] 49 9e-06
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 42 8e-04
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 42 0.001
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 42 0.001
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 42 0.001
gi|111607441 hypothetical protein LOC400506 [Homo sapiens] 41 0.002
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 40 0.003
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.003
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 40 0.003
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 40 0.005
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.007
gi|110349717 titin isoform novex-2 [Homo sapiens] 38 0.015
gi|110349713 titin isoform novex-1 [Homo sapiens] 38 0.015
gi|110349715 titin isoform N2-B [Homo sapiens] 38 0.015
>gi|76781492 XPMC2 prevents mitotic catastrophe 2 homolog [Homo
sapiens]
Length = 422
Score = 842 bits (2176), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 1 MGKAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPP 60
MGKAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPP
Sbjct: 1 MGKAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPP 60
Query: 61 KAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMP 120
KAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMP
Sbjct: 61 KAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMP 120
Query: 121 AGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRK 180
AGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRK
Sbjct: 121 AGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRK 180
Query: 181 AKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGL 240
AKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGL
Sbjct: 181 AKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGL 240
Query: 241 TRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPEN 300
TRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPEN
Sbjct: 241 TRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPEN 300
Query: 301 LKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSG 360
LKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSG
Sbjct: 301 LKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSG 360
Query: 361 RPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARDRRPLLTAPDHCSD 420
RPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARDRRPLLTAPDHCSD
Sbjct: 361 RPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARDRRPLLTAPDHCSD 420
Query: 421 DA 422
DA
Sbjct: 421 DA 422
>gi|194239666 interferon stimulated exonuclease gene 20kDa-like 1
[Homo sapiens]
Length = 325
Score = 152 bits (385), Expect = 4e-37
Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 10/230 (4%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSL--VKEQAFGGL-TRALALDCEMVGVGPKG 257
P AA EAA ++ L GS S +A G L ++ +A+DCEMVG GP+G
Sbjct: 65 PTPFGAATATEAASSGKQCLRAGSGSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRG 124
Query: 258 EESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEM 317
S AR SIV+ +G +YDKY++P P+ DYRT SGI +++++ +V QKE+ ++
Sbjct: 125 RVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKL 184
Query: 318 LKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQV---KSGRPSLRLLSEKIL-- 372
LKG+++VGHALHND + L HP+ + RDT F S+ R SL+ L+ ++L
Sbjct: 185 LKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHK 244
Query: 373 GLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARDRRPLLTAPDHCSDDA 422
+QV Q H S++DA AM LY +V+ +WE ++ R L T P+ D+
Sbjct: 245 KIQVGQHGHSSVEDATTAMELYRLVEVQWEQ--QEARSLWTCPEDREPDS 292
>gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2
[Homo sapiens]
Length = 353
Score = 138 bits (348), Expect = 8e-33
Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 29/314 (9%)
Query: 98 KKPKIIQQ-NKKETSPQVKGE-EMPAGKDQEASRGSVPSGSKMDRRAPVP-RTKASGTEH 154
K PK+ + +KK +P V G + P+ ++ + S SG +D++A V T A +
Sbjct: 50 KAPKLHSEPSKKGETPTVDGTWKTPSFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSKKA 109
Query: 155 NKKGTKERTNGDIVPERGDIE-HKKRKAKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAA 213
+ K G+ I H R K+++ ++++ P+
Sbjct: 110 DSVAAKVDLLGEFQSALPKINSHPTRSQKKSSQKKSSKKN---------------HPQKN 154
Query: 214 KIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGK 273
SE S + K + +A+DCEMVG GPKG S AR SIVN G
Sbjct: 155 APQNSTQAHSENKCSGASQKLPR-----KMVAIDCEMVGTGPKGHVSSLARCSIVNYNGD 209
Query: 274 CVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHNDLK 333
+YD+Y+ P + DYRT SGIR +++ ++ + ++ ++L G+I+VGHA+HND K
Sbjct: 210 VLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKILTGKIVVGHAIHNDFK 269
Query: 334 VLFLDHPKKKIRDTQKYKPFKSQV---KSGRPSLRLLSEKILG--LQVQQAEHCSIQDAQ 388
L HPK RDT P + ++ SL+ L++K+L +QV ++ H S++DAQ
Sbjct: 270 ALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQ 329
Query: 389 AAMRLYVMVKKEWE 402
A M LY +V+ EWE
Sbjct: 330 ATMELYKLVEVEWE 343
>gi|6857800 interferon stimulated exonuclease [Homo sapiens]
Length = 181
Score = 114 bits (286), Expect = 1e-25
Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 6/161 (3%)
Query: 239 GLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRP 298
G +A+DCEMVG+GP E +A R S+VN +G +YDK+++P +TDYRT VSG+ P
Sbjct: 3 GSREVVAMDCEMVGLGPHRESGLA-RCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTP 61
Query: 299 ENLKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVK 358
+++ V + E+ ++LKG+++VGH L +D + L D I DT + + K
Sbjct: 62 QHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAK 121
Query: 359 ---SGRPSLRLLSEKILGLQVQQA--EHCSIQDAQAAMRLY 394
R SLR+LSE++L +Q + H S++DA+A M LY
Sbjct: 122 LDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELY 162
>gi|188536114 PAN2 polyA specific ribonuclease subunit homolog isoform
2 [Homo sapiens]
Length = 1202
Score = 64.7 bits (156), Expect = 2e-10
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 204 IEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGP-------- 255
IEA++ A +ARKQ + L L + G L + LD E V +
Sbjct: 938 IEASVLLAEASLARKQRKTHTTFIPLMLNEMPQIGDL---VGLDAEFVTLNEEEAELRSD 994
Query: 256 ------KGEESMAARVSIVNQYGKC----VYDKYVKPTEPVTDYRTAVSGIRPENLKQGE 305
K + AR++ V G D Y+ E V DY T SGI+P +L
Sbjct: 995 GTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKI 1054
Query: 306 ELEVVQKEVAEMLKGRIL-------VGHALHNDLKVLFLDHPKKKIRDTQK--YKPFKSQ 356
+ + + LK R L VGH L D +V+ L PK ++ DT + P K
Sbjct: 1055 SSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRM 1114
Query: 357 VKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 394
+ SLR L+ L L++Q H SI+DA+ A++LY
Sbjct: 1115 I-----SLRFLAWYFLDLKIQGETHDSIEDARTALQLY 1147
>gi|188536112 PAN2 polyA specific ribonuclease subunit homolog isoform
1 [Homo sapiens]
Length = 1198
Score = 64.7 bits (156), Expect = 2e-10
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 204 IEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGP-------- 255
IEA++ A +ARKQ + L L + G L + LD E V +
Sbjct: 934 IEASVLLAEASLARKQRKTHTTFIPLMLNEMPQIGDL---VGLDAEFVTLNEEEAELRSD 990
Query: 256 ------KGEESMAARVSIVNQYGKC----VYDKYVKPTEPVTDYRTAVSGIRPENLKQGE 305
K + AR++ V G D Y+ E V DY T SGI+P +L
Sbjct: 991 GTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKI 1050
Query: 306 ELEVVQKEVAEMLKGRIL-------VGHALHNDLKVLFLDHPKKKIRDTQK--YKPFKSQ 356
+ + + LK R L VGH L D +V+ L PK ++ DT + P K
Sbjct: 1051 SSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRM 1110
Query: 357 VKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 394
+ SLR L+ L L++Q H SI+DA+ A++LY
Sbjct: 1111 I-----SLRFLAWYFLDLKIQGETHDSIEDARTALQLY 1143
>gi|222136615 exonuclease NEF-sp isoform 2 [Homo sapiens]
Length = 743
Score = 63.5 bits (153), Expect = 3e-10
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 246 LDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-G 304
LDCEM + KG E R+S+V + G CV D+ VKP + DY T+ SGI + L
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVT 287
Query: 305 EELEVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPS 363
+L+ VQ+++ +L +LVGH+L DL+ L + HP + DT + + R
Sbjct: 288 TKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSL---LYVREQGRRFK 342
Query: 364 LRLLSEKILGLQVQ---QAEHCSIQDAQAAMRL 393
L+ L++ ILG +Q + H + +DA+ + L
Sbjct: 343 LKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>gi|222136613 exonuclease NEF-sp isoform 1 [Homo sapiens]
Length = 774
Score = 63.5 bits (153), Expect = 3e-10
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 246 LDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-G 304
LDCEM + KG E R+S+V + G CV D+ VKP + DY T+ SGI + L
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVT 287
Query: 305 EELEVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPS 363
+L+ VQ+++ +L +LVGH+L DL+ L + HP + DT + + R
Sbjct: 288 TKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSL---LYVREQGRRFK 342
Query: 364 LRLLSEKILGLQVQ---QAEHCSIQDAQAAMRL 393
L+ L++ ILG +Q + H + +DA+ + L
Sbjct: 343 LKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>gi|145199237 transcription elongation factor B polypeptide 3 binding
protein 1 [Homo sapiens]
Length = 1221
Score = 57.8 bits (138), Expect = 2e-08
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 206 AAIGPEAAKIARKQL--GQSEGSVSLSLVKEQAFGGLTRA--LALDCEMVGVGPKGEESM 261
AA G ++A++ + G+ E E+ G T ALDCEM G E
Sbjct: 1019 AAAGSVGCQVAKQHVQDGRKERLEGFVKTFEKELSGDTHPGIYALDCEM-SYTTYGLE-- 1075
Query: 262 AARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-GEELEVVQKEVAEMLKG 320
RV++V+ VYD +VKP + DY T SG+ +L L VQ + M
Sbjct: 1076 LTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSA 1135
Query: 321 -RILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQA 379
IL+GH+L +DL L + H + DT P + + R L+++ + +
Sbjct: 1136 DTILIGHSLESDLLALKVIH--STVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNV 1193
Query: 380 E-HCSIQDAQAAMRLYVMVKKE 400
+ H S +DA A M L + +E
Sbjct: 1194 DGHSSSEDAGACMHLVIWKVRE 1215
>gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo
sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 633 SQDGHNSSEDANACLQL 649
>gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 633 SQDGHNSSEDANACLQL 649
>gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo
sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 633 SQDGHNSSEDANACLQL 649
>gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo
sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 633 SQDGHNSSEDANACLQL 649
>gi|239743594 PREDICTED: hypothetical protein XP_002342913, partial
[Homo sapiens]
Length = 552
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 339 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 393
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 394 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 452
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 453 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 509
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 510 SQDGHNSSEDANACLQL 526
>gi|126273519 exonuclease GOR [Homo sapiens]
Length = 675
Score = 56.2 bits (134), Expect = 5e-08
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 201 PADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEES 260
P + + + + RK+ +G V + KE + ALDCEM E
Sbjct: 462 PGSVGCQVAKQHVRDGRKE--SLDGFVE-TFKKELSRDAYPGIYALDCEMCYTTHGLE-- 516
Query: 261 MAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL-KQGEELEVVQKEVAEMLK 319
RV++V+ + VYD +VKP + DY T SG+ ++ K L VQ +
Sbjct: 517 -LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFS 575
Query: 320 GR-ILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQ 378
+ IL+GH+L +DL L L H + DT P R SLR L+ L +Q
Sbjct: 576 AQTILIGHSLESDLLALKLIH--STVVDTAVLFPHYLGFPYKR-SLRNLAADYLAQIIQD 632
Query: 379 AE--HCSIQDAQAAMRL 393
++ H S +DA A ++L
Sbjct: 633 SQDGHNSSEDASACLQL 649
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 49.7 bits (117), Expect = 5e-06
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 13/218 (5%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKA 62
KAK PA + A S P AK + ++ K + K+ E +K PA K+
Sbjct: 549 KAKSPAKEEAKSPPEAKS--------PEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKS 600
Query: 63 PEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAG 122
PE K + + KS E+ +++ S +K K + + ++ + K E
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEA 660
Query: 123 KDQEASRGSVPSGSKMDRRAPVP-RTKASGTEHNKKGTKERTNGDIVPERGDIEHKKR-K 180
K E ++ V + +K +A P + +A E K KE PE+ K+ K
Sbjct: 661 KSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKS---PEKAKSPVKEEAK 717
Query: 181 AKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARK 218
+ E A +P EE + E A PE AK K
Sbjct: 718 SPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK 755
Score = 48.9 bits (115), Expect = 9e-06
Identities = 52/197 (26%), Positives = 71/197 (36%), Gaps = 12/197 (6%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKA 62
KAK P A S AK PVK + K K S +E +K P V K+
Sbjct: 665 KAKSPVKAEAKSPEKAK-SPVKAEAKSPEKAK-----SPVKEEAKSPEKAKSPVKEEAKS 718
Query: 63 PEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGE-EMPA 121
PE K + K KS E+ + S +K K + E K E PA
Sbjct: 719 PEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPA 778
Query: 122 GKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHK---- 177
K E ++ V K +A P + + + KE + E E K
Sbjct: 779 DKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEP 838
Query: 178 -KRKAKEAAPAPPTEED 193
K+ +E APA P E+
Sbjct: 839 PKKAEEEKAPATPKTEE 855
Score = 42.0 bits (97), Expect = 0.001
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 11/184 (5%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKA 62
KAK P + A S AK PVK + K K S +E +K P V K+
Sbjct: 693 KAKSPVKEEAKSPEKAK-SPVKEEAKSPEKAK-----SPVKEEAKTPEKAKSPVKEEAKS 746
Query: 63 PEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAG 122
PE KA + +++ P K S + K P+ + KE + + P
Sbjct: 747 PEKAKSPEKAKTLDVKSPEAKTPAKEEARSP--ADKFPEKAKSPVKEEVKSPEKAKSPLK 804
Query: 123 KDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAK 182
+D +A +P K + ++PV + + E K ++ + P E KK K
Sbjct: 805 EDAKAPEKEIPK--KEEVKSPV-KEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKK 861
Query: 183 EAAP 186
E AP
Sbjct: 862 EEAP 865
Score = 41.2 bits (95), Expect = 0.002
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 16/204 (7%)
Query: 3 KAKVPASKRAPSSPVAK-PGPVKTLTRKKNKKKKRFW-----KSKAREVSKKPASGPGAV 56
+AK PA ++P AK P VK+ + K+ K+ KS +E +K P V
Sbjct: 611 EAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPV 670
Query: 57 VRPPKAPEDFSQNWKA------LQEWLLKQKSQAPEKPL--VISQMGSKKKPKIIQQNKK 108
K+PE KA + +K+++++PEK V + S +K K + +
Sbjct: 671 KAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 730
Query: 109 ETSPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGT-KERTNGDI 167
+T + K K E ++ S +D ++P +T A + E+ +
Sbjct: 731 KTPEKAKSPVKEEAKSPEKAK-SPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPV 789
Query: 168 VPERGDIEHKKRKAKEAAPAPPTE 191
E E K KE A AP E
Sbjct: 790 KEEVKSPEKAKSPLKEDAKAPEKE 813
Score = 37.4 bits (85), Expect = 0.026
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 60 PKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKK--PKIIQQNKKETSPQVKGE 117
PK P S + K E +K ++ ++ +++ + + + ++ ++ +KE + +G+
Sbjct: 427 PKIPS-VSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEE-EGK 484
Query: 118 EMPAGKDQEASRGSVPSGSKMDRRAPVPRTKA-SGTEHNKKGTKERTNGDIVPERGDIEH 176
E G+++EA G + S A P +A S + K E + + + E
Sbjct: 485 EEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEV 544
Query: 177 K-----KRKAKEAAPAPPTEEDIWFDDV-DPADIEAAIGPEAAKIARKQLGQSEGSV--- 227
K K AKE A +PP + ++ PA++++ PE AK K+ +S
Sbjct: 545 KSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKS---PEKAKSPAKEEAKSPAEAKSP 601
Query: 228 --SLSLVKEQA 236
+ S VKE+A
Sbjct: 602 EKAKSPVKEEA 612
Score = 35.8 bits (81), Expect = 0.075
Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 24/211 (11%)
Query: 39 KSKAREVSKKPASGPGAVVRPPKAPEDFSQNWK----ALQEWLLKQKSQAPEKPLVISQM 94
KS +E +K PA K+P + K A +E ++++PEK
Sbjct: 517 KSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE------ 570
Query: 95 GSKKKPKIIQQNKKETSPQVKGEEMPA-GKDQEASRGSVPSGSKMDRRAPVP-------R 146
K P ++ +K SP + + PA K E ++ V +K A P
Sbjct: 571 -EAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSP 629
Query: 147 TKASGTEHNKKGTKERTNGDIVPERG-DIEHKKRKAKEAAPAPPTEEDIWFDDVDPADIE 205
+ E K TKE PE+ E ++ K+ E A +P E +
Sbjct: 630 AEVKSPEKAKSPTKEEAKS---PEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKA 686
Query: 206 AAIGPEAAKIARKQLGQSEGSVSLSLVKEQA 236
A PE AK K+ +S S VKE+A
Sbjct: 687 EAKSPEKAKSPVKEEAKSPEKAK-SPVKEEA 716
Score = 35.0 bits (79), Expect = 0.13
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 29/195 (14%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKNKK----KKRFWKSKAREVSKKPASGPGAVVR 58
K K P K A P KT +K +KK KK K K E K+PA V +
Sbjct: 834 KVKEPPKKAEEEKAPATP---KTEEKKDSKKEEAPKKEAPKPKVEE-KKEPA-----VEK 884
Query: 59 PPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQN------KKETSP 112
P ++ + + ++ + + +AP K V K+K ++ ++ K+ + P
Sbjct: 885 PKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKP 944
Query: 113 QVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKE--RTNGDIVPE 170
K E P KD + + P P+T+A E +K +KE + + +
Sbjct: 945 AEKKEAAPEKKDTKEEKAKKPEEK--------PKTEAKAKEDDKTLSKEPSKPKAEKAEK 996
Query: 171 RGDIEHKKRKAKEAA 185
+ K K E A
Sbjct: 997 SSSTDQKDSKPPEKA 1011
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 48.9 bits (115), Expect = 9e-06
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 28/265 (10%)
Query: 4 AKVPASKRAPSSPVAKPGPVKTLTRKKNKKKK----RFWKSKAREVSKKPASGPGAVVRP 59
AKV ++ PS P K K K +K + R+ KP P + P
Sbjct: 235 AKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPA--IPP 292
Query: 60 PKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEM 119
P E S+ A K+ + + V S+ K+K I ++++KET+ V+ +E
Sbjct: 293 PLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKE- 351
Query: 120 PAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKR 179
GK E +G+V + + A E + K + ++ +G + KK
Sbjct: 352 -PGKASETKQGTVKIAA---------QAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKE 401
Query: 180 KAKEAAPAPPTEEDIWFDDVDPADIEAA---IGPEAAK--IARKQLGQSEGSVSLSLVKE 234
K E A +P E + D A E A IG + K + K+ ++ +V + KE
Sbjct: 402 KHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKE 461
Query: 235 QAFGGLTRALALDCEMVGVGPKGEE 259
++ G T ++ D E + KG+E
Sbjct: 462 KS--GKTSSILKDKEPI----KGKE 480
Score = 31.2 bits (69), Expect = 1.9
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 24 KTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNWKALQEWLLKQKSQ 83
K + + K +K+++ + +V+ K VR + PE + + K+K +
Sbjct: 141 KEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATH---------KEKIE 191
Query: 84 APEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAP 143
EKP + +KK K ++++++T +VKG + K Q A++ + +
Sbjct: 192 KKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVK-QTAAKVKEVQKTPSKPKEK 250
Query: 144 VPRTKASGTEHNKK 157
+ KA+ ++H +K
Sbjct: 251 EDKEKAAVSKHEQK 264
Score = 30.8 bits (68), Expect = 2.4
Identities = 43/238 (18%), Positives = 86/238 (36%), Gaps = 45/238 (18%)
Query: 3 KAKVPASKR----APSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVR 58
K K P +K+ + + KP P + +K+ K + + K +S+K +V+
Sbjct: 488 KEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVK 547
Query: 59 PPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEE 118
P K K L++ K + I + K K + ++E
Sbjct: 548 PEKTVSHGKPEEKVLKQ----------VKAVTIEKTAKPKPTKKAEHRERE--------- 588
Query: 119 MPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKK 178
P K D+ P P+ + TE KK T+ E+ D++H +
Sbjct: 589 --------------PPSIKTDKPKPTPKGTSEVTESGKKKTEISEKES--KEKADMKHLR 632
Query: 179 RKAKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQLGQSEGSVSLSLVKEQA 236
+ +E + +V A+ A + + + + + EG+ +S K+++
Sbjct: 633 EE-----KVSTRKESLQLHNVTKAEKPARVSKDVEDVPASKKAK-EGTEDVSPTKQKS 684
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 6 VPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPED 65
+PAS+ +P A + +KK+KKKK K + E K+ GP KA ++
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKK---KGEKEEKEKEKKKGPSKAT--VKAMQE 346
Query: 66 FSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKK-PKIIQQNKKETSPQVKGEEMPAGKD 124
K +E +QK + E+ + ++ +K+K + ++Q K+E Q + E K+
Sbjct: 347 ALAKLKEEEE---RQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKER----KE 399
Query: 125 QEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRK 180
+ G + + S+ + RA R +A+ +G + + + +R E KKRK
Sbjct: 400 RLKKEGKLLTKSQREARA---RAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRK 452
Score = 29.3 bits (64), Expect = 7.0
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 59 PPKAPEDFSQNWKA-LQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGE 117
PP PE+ A L +W + EK G+K ++ + ++E + + E
Sbjct: 488 PPVEPEEEEDTEDAGLDDWEAMASDEETEKV-----EGNKVHIEVKENPEEEEEEEEEEE 542
Query: 118 EMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHK 177
E +++E G + V K SG +KK +KE ++ D + D K
Sbjct: 543 EDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSS-DSEYDSDDDRTK 601
Query: 178 KRKAKEAA 185
+ +A + A
Sbjct: 602 EERAYDKA 609
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 9 SKRAPSSPVAKP-----------GPVKTLTRKKNKKKKRFWKSKAREV---SKKPASGPG 54
S A +P+ KP P++ T KKKK + K K+R+ K+P PG
Sbjct: 1113 SDDADDTPILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPG 1172
Query: 55 ----AVVRPPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKET 110
+ P + ++ + K K Q E+ + K+ + ++ K+E
Sbjct: 1173 FKLSREIMPVSTQACVIEPIVSIPKAGRKPKIQESEETVE-----PKEDMPLPEERKEEE 1227
Query: 111 SPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPE 170
Q + EE G++++A+ VP+ S D + P T+ E ++ K R + E
Sbjct: 1228 EMQAEAEEAEEGEEEDAASSEVPAASPAD-SSNSPETETKEPEVEEEEEKPR----VSEE 1282
Query: 171 RGDIEHKKRKAKEAAPAPPTEED 193
+ E ++++ +E P P EED
Sbjct: 1283 QRQSEEEQQELEE--PEPEEEED 1303
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 9 SKRAPSSPVAKP-----------GPVKTLTRKKNKKKKRFWKSKAREV---SKKPASGPG 54
S A +P+ KP P++ T KKKK + K K+R+ K+P PG
Sbjct: 1113 SDDADDTPILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPG 1172
Query: 55 ----AVVRPPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKET 110
+ P + ++ + K K Q E+ + K+ + ++ K+E
Sbjct: 1173 FKLSREIMPVSTQACVIEPIVSIPKAGRKPKIQESEETVE-----PKEDMPLPEERKEEE 1227
Query: 111 SPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPE 170
Q + EE G++++A+ VP+ S D + P T+ E ++ K R + E
Sbjct: 1228 EMQAEAEEAEEGEEEDAASSEVPAASPAD-SSNSPETETKEPEVEEEEEKPR----VSEE 1282
Query: 171 RGDIEHKKRKAKEAAPAPPTEED 193
+ E ++++ +E P P EED
Sbjct: 1283 QRQSEEEQQELEE--PEPEEEED 1303
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 9 SKRAPSSPVAKP-----------GPVKTLTRKKNKKKKRFWKSKAREV---SKKPASGPG 54
S A +P+ KP P++ T KKKK + K K+R+ K+P PG
Sbjct: 1113 SDDADDTPILKPVSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPG 1172
Query: 55 ----AVVRPPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKET 110
+ P + ++ + K K Q E+ + K+ + ++ K+E
Sbjct: 1173 FKLSREIMPVSTQACVIEPIVSIPKAGRKPKIQESEETVE-----PKEDMPLPEERKEEE 1227
Query: 111 SPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPE 170
Q + EE G++++A+ VP+ S D + P T+ E ++ K R + E
Sbjct: 1228 EMQAEAEEAEEGEEEDAASSEVPAASPAD-SSNSPETETKEPEVEEEEEKPR----VSEE 1282
Query: 171 RGDIEHKKRKAKEAAPAPPTEED 193
+ E ++++ +E P P EED
Sbjct: 1283 QRQSEEEQQELEE--PEPEEEED 1303
>gi|111607441 hypothetical protein LOC400506 [Homo sapiens]
Length = 458
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 83 QAPEKPLVISQMGSKKKPKIIQQNKKE---TSPQVKGEEMPAGKDQEASRGSVPSGSKMD 139
QAPE PLV + KK + + E T P + E+ P+ + Q SG K +
Sbjct: 57 QAPEMPLVKKKKKKKKGVSTLCEEHVEPETTLPARRTEKSPSLRKQVFGHLEFLSGEKKN 116
Query: 140 RRAPVPRTKASGTEHN---KKGTKERTNGDIVPERGDIEHKKRKAKEAAPAPPTEEDIWF 196
+++P+ + ASG + + ++G +E G + +HKK K P + +D WF
Sbjct: 117 KKSPLAMSHASGVKTSPDPRQGEEETRVGKKLK-----KHKKEKKGAQDPTAFSVQDPWF 171
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 40.4 bits (93), Expect = 0.003
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 22 PVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPK---APEDFSQNWKALQEWLL 78
PV + K R K+K+ + + + AV + ED+++N K + +
Sbjct: 29 PVTPEVKPKRTSSSRKMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKIT 88
Query: 79 KQKSQAPEKPLV---------ISQMGSKKKPKIIQQNKKETSPQVKGEEMP------AGK 123
+ + A EK +V ++ G +KK + + K E Q + EE AGK
Sbjct: 89 E--APASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGK 146
Query: 124 DQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKE 183
+ + +G K D+ A E KKG + NG+ E+G+ E ++ KE
Sbjct: 147 EDKDEKGE--EDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKE 204
Query: 184 AAPAPPTEE 192
E+
Sbjct: 205 TGDGKENED 213
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.003
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 24 KTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNWKALQEWLLKQKSQ 83
KT+ R ++ R ++E+ KP++ P ++ D S + KA L+Q+S+
Sbjct: 1526 KTVARTPLGQRSR--SGSSQELDVKPSASP-----QERSESDSSPDSKAKTRTPLRQRSR 1578
Query: 84 APEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAP 143
+ P V S+ S+ P+ +++ +SP+VK + A + Q S S + R
Sbjct: 1579 SGSSPEVDSK--SRLSPR---RSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPR--A 1631
Query: 144 VPRTKASGTEHNKKGTKER--TNGDIVPERGDIEHKKRKAKEAAPAPPTE 191
+PR SG+ +G ++ + PE R+ ++P P T+
Sbjct: 1632 LPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTK 1681
Score = 30.0 bits (66), Expect = 4.1
Identities = 45/186 (24%), Positives = 68/186 (36%), Gaps = 39/186 (20%)
Query: 8 ASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFS 67
A R P ++ G + K +R + EV KP + P A +PE
Sbjct: 1567 AKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPE--- 1623
Query: 68 QNWKALQEWLLKQKSQAPEKPLVISQMGSKKK---PKIIQQNKKETSPQVKGEEMPAGKD 124
K+ AP S+ GS K P + E+SP E P K
Sbjct: 1624 ------------PKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSP----EHPP--KS 1665
Query: 125 QEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKEA 184
+ A RGS R +P P+TK S T ++ ++ PE R+++ A
Sbjct: 1666 RTARRGS--------RSSPEPKTK-SRTPPRRRSSRSS------PELTRKARLSRRSRSA 1710
Query: 185 APAPPT 190
+ +P T
Sbjct: 1711 SSSPET 1716
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 40.4 bits (93), Expect = 0.003
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 7 PASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWK--------SKAREVSKKPASGPGAVVR 58
P+ +++ SP K P + KK++K SK + KK GP
Sbjct: 210 PSLRKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKK---GPRTPSP 266
Query: 59 PPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEE 118
PP PED + K +++ K K + EK ++ G + +Q +K P+
Sbjct: 267 PPPIPEDIALGKKYKEKY--KVKDRIEEK----TRDGKDRGRDFERQREKRDKPR---ST 317
Query: 119 MPAGKDQE--ASR---GSVPSGSKMDRRAPVPRTK 148
PAG+ +SR S SGS + R +P PR K
Sbjct: 318 SPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRK 352
Score = 35.8 bits (81), Expect = 0.075
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 17/182 (9%)
Query: 14 SSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNWKAL 73
SSPV K +R ++++K+ +K R + + R D N+ +
Sbjct: 109 SSPVRKES-----SRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDI--NYDYV 161
Query: 74 QEWLLKQKSQAPEKPLV-ISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRGSV 132
E L+ K Q ++ L+ + Q +K+ +II KKE SP+V ++ S+
Sbjct: 162 HELSLEMKRQKIQRELMKLEQENMEKREEIII--KKEVSPEVVRSKLSPSP-------SL 212
Query: 133 PSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKEAAPAPPTEE 192
SK +R P++ ++ + K D + KK+ + +P PP E
Sbjct: 213 RKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPE 272
Query: 193 DI 194
DI
Sbjct: 273 DI 274
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 39.7 bits (91), Expect = 0.005
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 10 KRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQN 69
K P VAK + +++ KK+ K +E+ K+ P V+ P++ +
Sbjct: 653 KEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKE 712
Query: 70 WKALQEWLLKQKSQAPEKPL---------VISQMGSKKKPKIIQQNKKETSPQVKGEEMP 120
K ++ +K++ + P+K + + + KKP ++ + VK + +
Sbjct: 713 VKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVA 772
Query: 121 AGKDQEASR 129
AGK +E +
Sbjct: 773 AGKPKEKGK 781
Score = 38.9 bits (89), Expect = 0.009
Identities = 74/355 (20%), Positives = 126/355 (35%), Gaps = 38/355 (10%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKA 62
K K A R P AKP P K++ ++ ++ K E K S +V+ K
Sbjct: 534 KLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKP 593
Query: 63 PEDFSQNWKALQEWLLKQ-----------KSQAPEKPLVISQMGSKKKPKIIQQNKKETS 111
+ ++ +E K+ K KP + KK+ K+ ++KKE
Sbjct: 594 IKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEK 653
Query: 112 PQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPER 171
+ K E + P ++ + K E K+ KE ++ E
Sbjct: 654 EKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEV 713
Query: 172 GDIEHKKRKAKEAAPAP-----PTEEDIWFDDVDPADIEAAIGPEAAKIAR--------- 217
E K+ K +E P P + + A AA+ P+ K
Sbjct: 714 KKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAA 773
Query: 218 ---KQLG-----QSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGE-ESMAARVSIV 268
K+ G + EG + ++ G T A+ + +GP E E+ + +S
Sbjct: 774 GKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGPAKELEAERSLMSSP 833
Query: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIR-PENLKQGEELE--VVQKEVAEMLKG 320
K + + + D + + I E LK+ E +E V+QKE E+ KG
Sbjct: 834 EDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKE-REVTKG 887
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 39.3 bits (90), Expect = 0.007
Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 27/225 (12%)
Query: 5 KVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPE 64
KVP K+ + P +P P K + + K K +P P A PPK E
Sbjct: 10851 KVPVIKKPEAPPPKEPEPEKVIEKPKLK--------------PRPPPPPPA---PPK--E 10891
Query: 65 DFSQ---NWKALQEWLLKQKSQAPEK----PLVISQMGSKKKPKIIQQNKKETSPQVKGE 117
D + KA+ + + +K Q PEK PL + G KK K++ + K E +V +
Sbjct: 10892 DVKEKIFQLKAIPKKKVPEKPQVPEKVELTPLKVPG-GEKKVRKLLPERKPEPKEEVVLK 10950
Query: 118 EMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHK 177
+ + +E P + ++ VP + +PE +
Sbjct: 10951 SVLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEI 11010
Query: 178 KRKAKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQLGQ 222
K AP P + + + P +E P AA + +G+
Sbjct: 11011 KPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGK 11055
Score = 38.1 bits (87), Expect = 0.015
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 41 KAREVSKK--PASGPGAVVRPPKAPEDFSQNWKALQEWLLKQKSQAPEKPLVI-SQMGSK 97
K E+S+K P P V P K P ++ + ++ ++++K + PE+P V +++
Sbjct: 10441 KGPEISEKIIPPKKPPTKVVPRKEPP--AKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEV 10498
Query: 98 KKPKIIQQNKKETSPQVKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRTKASGTEHNKK 157
PK + KK P K E P K EA + VP +++ PVP K K
Sbjct: 10499 LPPKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVP-----EKKVPVPPPKKPEVPPTK- 10552
Query: 158 GTKERTNGDIVPERGDIEHKKRKAKEAAPAPP 189
VPE ++K EA P P
Sbjct: 10553 ----------VPEVPKAAVPEKKVPEAIPPKP 10574
Score = 37.4 bits (85), Expect = 0.026
Identities = 56/237 (23%), Positives = 85/237 (35%), Gaps = 42/237 (17%)
Query: 5 KVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVV----RPP 60
KVP R P KP PV KKK +K EV KKP ++ +PP
Sbjct: 9949 KVPEVPRKPVPEEKKPVPVP--------KKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPP 10000
Query: 61 KAPEDFSQNWKALQEWL---LKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGE 117
A +E + + +K +AP P + ++ K P+ KK P K
Sbjct: 10001 PAKVPEVPKKPVPEEKVPVPVPKKVEAP--PAKVPEVPKKPVPE-----KKVPVPAPKKV 10053
Query: 118 EMPAGKDQEASRGSVPSGSKMD---------------RRAPVPRTKASGTEHNKKGTKER 162
E P K E + +P K +R PVP A E +E
Sbjct: 10054 EAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEE- 10112
Query: 163 TNGDIVPERGDIEHKKRKAKEAAPAPPTEEDIWFDDVDPADIEAAIGPEAAKIARKQ 219
IVPE + ++ E P EE++ ++ + E + PE + ++
Sbjct: 10113 ----IVPEEEVLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEE 10165
Score = 33.9 bits (76), Expect = 0.29
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 3 KAKVPASKRAPSSPVAKPGPVKTLTRKKN-----KKKKRFWKSKAREVSKKPASG---PG 54
K VP +K+ + P P K + +K KK +K EV K P
Sbjct: 10509 KVPVPPAKKPEAPPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPE 10568
Query: 55 AVVRPPKAPEDFSQNWKALQEWLLKQK-SQAPEKPLVISQMGSKKKPKIIQQNKKETSPQ 113
A+ PPK + +A +E + ++K AP K ++ + + PK + KK P
Sbjct: 10569 AI--PPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPVPP 10626
Query: 114 VKGEEMPAGKDQEASRGSVPSGSKMDRRAPVPRT 147
K E+P K E + +VP + P P +
Sbjct: 10627 PKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPES 10660
Score = 28.9 bits (63), Expect = 9.2
Identities = 38/149 (25%), Positives = 54/149 (36%), Gaps = 10/149 (6%)
Query: 5 KVPASKRAPSSPVAKPGPVKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAV-VRPPKAP 63
KVP P+ P P+ K K E KKP P PPK P
Sbjct: 9287 KVPELPEKPAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPE-EKKPVPVPKKEPAAPPKVP 9345
Query: 64 EDFSQNWKALQEWL---LKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMP 120
E + +E + + +K +AP + Q G + KI ++E SP E+P
Sbjct: 9346 EVPKK--PVPEEKIPVPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIP 9403
Query: 121 AGKDQEASRGSVPSGSKMDRRAPVPRTKA 149
K E + P K + P P+ A
Sbjct: 9404 KKKVPEERK---PVPRKEEEVPPPPKVPA 9429
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 38.1 bits (87), Expect = 0.015
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 16 PVAKPGP-----VKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNW 70
P KP P +K++ RK+ ++++ + K E KKPA PPK E+
Sbjct: 4632 PERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPP---PPKPVEEVEVPT 4688
Query: 71 KALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRG 130
+E + + ++ PE I + KPK + K P V+ E P A+
Sbjct: 4689 VTKRERKIPEPTKVPEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPI-----AAPV 4743
Query: 131 SVP-SGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKEAAPAPP 189
+VP G K + +A P+ +A+ + KG ++T I ER +K + PP
Sbjct: 4744 TVPVVGKKAEAKA--PKEEAAKPKGPIKGVPKKTPSPIEAER-----RKLRPGSGGEKPP 4796
Query: 190 TE 191
E
Sbjct: 4797 DE 4798
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 38.1 bits (87), Expect = 0.015
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 16 PVAKPGP-----VKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNW 70
P KP P +K++ RK+ ++++ + K E KKPA PPK E+
Sbjct: 4565 PERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPP---PPKPVEEVEVPT 4621
Query: 71 KALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRG 130
+E + + ++ PE I + KPK + K P V+ E P A+
Sbjct: 4622 VTKRERKIPEPTKVPEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPI-----AAPV 4676
Query: 131 SVP-SGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKEAAPAPP 189
+VP G K + +A P+ +A+ + KG ++T I ER +K + PP
Sbjct: 4677 TVPVVGKKAEAKA--PKEEAAKPKGPIKGVPKKTPSPIEAER-----RKLRPGSGGEKPP 4729
Query: 190 TE 191
E
Sbjct: 4730 DE 4731
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 38.1 bits (87), Expect = 0.015
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 16 PVAKPGP-----VKTLTRKKNKKKKRFWKSKAREVSKKPASGPGAVVRPPKAPEDFSQNW 70
P KP P +K++ RK+ ++++ + K E KKPA PPK E+
Sbjct: 4440 PERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPP---PPKPVEEVEVPT 4496
Query: 71 KALQEWLLKQKSQAPEKPLVISQMGSKKKPKIIQQNKKETSPQVKGEEMPAGKDQEASRG 130
+E + + ++ PE I + KPK + K P V+ E P A+
Sbjct: 4497 VTKRERKIPEPTKVPEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPI-----AAPV 4551
Query: 131 SVP-SGSKMDRRAPVPRTKASGTEHNKKGTKERTNGDIVPERGDIEHKKRKAKEAAPAPP 189
+VP G K + +A P+ +A+ + KG ++T I ER +K + PP
Sbjct: 4552 TVPVVGKKAEAKA--PKEEAAKPKGPIKGVPKKTPSPIEAER-----RKLRPGSGGEKPP 4604
Query: 190 TE 191
E
Sbjct: 4605 DE 4606
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,919,558
Number of Sequences: 37866
Number of extensions: 890042
Number of successful extensions: 3696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 3365
Number of HSP's gapped (non-prelim): 488
length of query: 422
length of database: 18,247,518
effective HSP length: 105
effective length of query: 317
effective length of database: 14,271,588
effective search space: 4524093396
effective search space used: 4524093396
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.