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Search of human proteins with 7662294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
(607 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662294 EPM2A interacting protein 1 [Homo sapiens] 1219 0.0
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 205 9e-53
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 205 9e-53
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 113 4e-25
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 113 4e-25
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 110 4e-24
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 107 2e-23
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 101 2e-21
gi|115511046 zinc finger protein 258 [Homo sapiens] 100 5e-21
gi|46195755 SCAN domain containing 3 [Homo sapiens] 97 6e-20
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 33 0.99
gi|39930523 hypothetical protein LOC144097 [Homo sapiens] 32 1.7
gi|38045919 huntingtin interacting protein 1 [Homo sapiens] 32 2.2
gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens] 32 2.2
gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens] 32 2.2
gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens] 32 2.2
gi|71061468 centromere protein E [Homo sapiens] 31 3.8
gi|37674210 slingshot 2 [Homo sapiens] 30 4.9
gi|68448528 mesothelin-like [Homo sapiens] 30 4.9
gi|21450665 coiled-coil domain containing 138 [Homo sapiens] 30 4.9
gi|223029480 hypothetical protein LOC255352 [Homo sapiens] 30 6.4
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 30 8.4
gi|4505573 PAK-interacting exchange factor beta isoform a [Homo ... 30 8.4
gi|58197558 tudor domain containing 6 [Homo sapiens] 30 8.4
>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
Length = 607
Score = 1219 bits (3154), Expect = 0.0
Identities = 607/607 (100%), Positives = 607/607 (100%)
Query: 1 MWMTPKRSKMEVDEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEA 60
MWMTPKRSKMEVDEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEA
Sbjct: 1 MWMTPKRSKMEVDEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEA 60
Query: 61 EHEYYERYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDF 120
EHEYYERYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDF
Sbjct: 61 EHEYYERYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDF 120
Query: 121 VYQCMEVLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALD 180
VYQCMEVLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALD
Sbjct: 121 VYQCMEVLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALD 180
Query: 181 DQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQR 240
DQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQR
Sbjct: 181 DQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQR 240
Query: 241 MVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINT 300
MVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINT
Sbjct: 241 MVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINT 300
Query: 301 ISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEA 360
ISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEA
Sbjct: 301 ISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEA 360
Query: 361 FLVSVGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLN 420
FLVSVGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLN
Sbjct: 361 FLVSVGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLN 420
Query: 421 LFQRHIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRF 480
LFQRHIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRF
Sbjct: 421 LFQRHIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRF 480
Query: 481 IKKDLELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPII 540
IKKDLELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPII
Sbjct: 481 IKKDLELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPII 540
Query: 541 KGVACKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVR 600
KGVACKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVR
Sbjct: 541 KGVACKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVR 600
Query: 601 ERNESNP 607
ERNESNP
Sbjct: 601 ERNESNP 607
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 205 bits (522), Expect = 9e-53
Identities = 162/584 (27%), Positives = 280/584 (47%), Gaps = 56/584 (9%)
Query: 9 KMEVD-EALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEH-EYYE 66
K ++D E VF+ +W + Y VE + CL+C++ + ++E ++RRHY+ H ++Y+
Sbjct: 418 KRKIDQEGRVFQEKWERAYFFVEVQ--NIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYD 475
Query: 67 RYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQCME 126
+Y+ ER+R +E+ GL + L G D +C E
Sbjct: 476 QYM---------ERMR-----------DEKLHELKKGLRKYLL------GLSDT--ECPE 507
Query: 127 VLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVA 186
++ + H S Q + P + + NL +L + R F AYS+A+D+ +
Sbjct: 508 ---QKQVFAHPSPTQKSPVQP------VEDLAGNLWEKLREKIRSFVAYSIAIDEITDIN 558
Query: 187 YENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTT 246
L +FIRGV +V E+LL + +T S + S + +SL+ + ++V + +
Sbjct: 559 NTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVEKSLKKFCIDWSKLVSVAS 618
Query: 247 THTLRMIGENSGLVSYMREKAVSPNCWNVIHYS--GFLHLELLSSYDVDVNQIINTISEW 304
T T M+ N+GLV+ ++ + V+ C S +H E L + + ++ +++ + +
Sbjct: 619 TGTPAMVDANNGLVTKLKSR-VATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKS 677
Query: 305 IVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVS 364
+ I +RG+ EF TLL E +S++G + + WL RG LK F +E+++F+ S
Sbjct: 678 VNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIK-WLSRGLVLKRFFESLEEIDSFMSS 736
Query: 365 VGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQR 424
G S W+ D FLVD+ HL L+ L+ +D I F KL L++
Sbjct: 737 RGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWET 796
Query: 425 HIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKD 484
H+ NL FP L+ L +N+ D + P I L+ EF++ D + + +
Sbjct: 797 HLTRNNLAHFPTLK-----LASRNESDGLNYIPK-----IAELKTEFQKRLSDFKLYESE 846
Query: 485 LELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVA 544
L LFS+PF+ K + +++E+ LQ NT L +Y + +FY L SYP K
Sbjct: 847 LTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWG-SYPKYKHHC 905
Query: 545 CKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVAT 588
K+ S+F S ICE+ FS + ++ L D ++ +AT
Sbjct: 906 AKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 205 bits (522), Expect = 9e-53
Identities = 160/584 (27%), Positives = 274/584 (46%), Gaps = 56/584 (9%)
Query: 9 KMEVD-EALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEH-EYYE 66
K ++D E VF+ +W + Y VE + CL+C++ + ++E ++RRHY+ H ++Y+
Sbjct: 418 KRKIDQEGRVFQEKWERAYFFVEVQ--NIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYD 475
Query: 67 RYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQCME 126
+Y ER+R +E+ GL + L G +C
Sbjct: 476 QYT---------ERMR-----------DEKLHELKKGLRKYLL--------GSSDTEC-- 505
Query: 127 VLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVA 186
PE V + Q + + NL +L + R F AYS+A+D+ +
Sbjct: 506 -------PEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDIN 558
Query: 187 YENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTT 246
L +FIRGV +V E+LL + +T S + + +SL+ ++ R+V + +
Sbjct: 559 NTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVAS 618
Query: 247 THTLRMIGENSGLVSYMREKAVSPNCWNVIHYS--GFLHLELLSSYDVDVNQIINTISEW 304
T T M+ N+GLV+ ++ + V+ C S +H E L + + ++ +++ + +
Sbjct: 619 TGTPAMVDANNGLVTKLKSR-VATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKS 677
Query: 305 IVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVS 364
+ I +RG+ EF TLL E +S++G + + WL RG LK F +E+++F+ S
Sbjct: 678 VNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIK-WLSRGLVLKRFFESLEEIDSFMSS 736
Query: 365 VGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQR 424
G S W+ D FLVD+ HL L+ L+ +D I F KL L++
Sbjct: 737 RGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWET 796
Query: 425 HIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKD 484
H+ NL FP L+ L +N+ D + P I L+ EF++ D + + +
Sbjct: 797 HLTRNNLAHFPTLK-----LVSRNESDGLNYIPK-----IAELKTEFQKRLSDFKLYESE 846
Query: 485 LELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVA 544
L LFS+PF+ K + +++E+ LQ NT L +Y + +FY L SYP K
Sbjct: 847 LTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWG-SYPKYKHHC 905
Query: 545 CKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVAT 588
K+ S+F S ICE+ FS + ++ L D ++ +AT
Sbjct: 906 AKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 113 bits (283), Expect = 4e-25
Identities = 124/544 (22%), Positives = 227/544 (41%), Gaps = 40/544 (7%)
Query: 37 ALCLVCRRLIV--ATRERDVRRHYEAEHEYYERYVADGERAALVERLRQGD-----LPVA 89
A C++C++++ + +RRH E +H Y+ D + + + L + P
Sbjct: 130 AQCVLCKKILSNSSLAPSKLRRHLETKHAAYK----DKDISFFKQHLDSPENNKPPTPKI 185
Query: 90 SFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQ--CMEVLLREVLPEHVSVLQGVDLSP 147
T E A A + +AL G G+ + + +V++R ++ + V LS
Sbjct: 186 VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSN 245
Query: 148 DITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQED 207
+RI + ++ +L R + +SL LD+ A V+ LLVF+R ++ED
Sbjct: 246 STVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEED 304
Query: 208 LLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRM---IGENSGLVSYMR 264
LL +L + + + + I +Q + ++ V + + + + I E L+ Y+
Sbjct: 305 LLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVA 364
Query: 265 EKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTE 324
++ S +C + Y L ++++ + + +++ + I IK R P LL
Sbjct: 365 PESTSSHC---LLYRHALAVKIMPT---SLKNVLDQAVQIINYIKAR----PHQSRLLKI 414
Query: 325 SESEHGERVNGRCLNN---WLRRGKTLKLIFSLRKEMEAFLVSVGATTVHFSDKQWLCDF 381
E G + LN WL RGK L +F LR+E+ F+ S + ++ WL
Sbjct: 415 LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRL 474
Query: 382 GFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEKNLTDFPALREVV 441
+L DI L E++ ++ V FD + + KL + +EE+N FP L + +
Sbjct: 475 AYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFL 534
Query: 442 DELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSNPFNFKPEYAPI 501
E+ D D ++ L+ K + NPF + A +
Sbjct: 535 TEI-------NSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASL 587
Query: 502 SVR--VELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEK 559
R L L +++ + + L F++ L E YP I A +V F + +CE
Sbjct: 588 VARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQE-YPSIARRAVRVLLPFATMHLCET 646
Query: 560 AFSY 563
FSY
Sbjct: 647 GFSY 650
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 113 bits (283), Expect = 4e-25
Identities = 124/544 (22%), Positives = 227/544 (41%), Gaps = 40/544 (7%)
Query: 37 ALCLVCRRLIV--ATRERDVRRHYEAEHEYYERYVADGERAALVERLRQGD-----LPVA 89
A C++C++++ + +RRH E +H Y+ D + + + L + P
Sbjct: 130 AQCVLCKKILSNSSLAPSKLRRHLETKHAAYK----DKDISFFKQHLDSPENNKPPTPKI 185
Query: 90 SFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQ--CMEVLLREVLPEHVSVLQGVDLSP 147
T E A A + +AL G G+ + + +V++R ++ + V LS
Sbjct: 186 VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSN 245
Query: 148 DITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQED 207
+RI + ++ +L R + +SL LD+ A V+ LLVF+R ++ED
Sbjct: 246 STVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEED 304
Query: 208 LLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRM---IGENSGLVSYMR 264
LL +L + + + + I +Q + ++ V + + + + I E L+ Y+
Sbjct: 305 LLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVA 364
Query: 265 EKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTE 324
++ S +C + Y L ++++ + + +++ + I IK R P LL
Sbjct: 365 PESTSSHC---LLYRHALAVKIMPT---SLKNVLDQAVQIINYIKAR----PHQSRLLKI 414
Query: 325 SESEHGERVNGRCLNN---WLRRGKTLKLIFSLRKEMEAFLVSVGATTVHFSDKQWLCDF 381
E G + LN WL RGK L +F LR+E+ F+ S + ++ WL
Sbjct: 415 LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRL 474
Query: 382 GFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEKNLTDFPALREVV 441
+L DI L E++ ++ V FD + + KL + +EE+N FP L + +
Sbjct: 475 AYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFL 534
Query: 442 DELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSNPFNFKPEYAPI 501
E+ D D ++ L+ K + NPF + A +
Sbjct: 535 TEI-------NSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASL 587
Query: 502 SVR--VELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEK 559
R L L +++ + + L F++ L E YP I A +V F + +CE
Sbjct: 588 VARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQE-YPSIARRAVRVLLPFATMHLCET 646
Query: 560 AFSY 563
FSY
Sbjct: 647 GFSY 650
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 110 bits (275), Expect = 4e-24
Identities = 125/598 (20%), Positives = 251/598 (41%), Gaps = 46/598 (7%)
Query: 30 EPPEGDGALCLVCRRLIV--ATRERDVRRHYEAEH--------EYYERYVADGERAALVE 79
+P E D C++C ++ + + ++RH E +H EY++R D
Sbjct: 77 KPFENDRPQCVICNNILANESLKPSKLKRHLETQHAELIDKPLEYFQRKKKD-------I 129
Query: 80 RLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQCMEVLLREVLPEHVSV 139
+L L ++ E+ + L R+ K + ++R + + +
Sbjct: 130 KLSTQFLSCSTAVSEKALLSSYLVAYRVAKEKIANTAAEKIILPACLDMVRTIFDDKSAD 189
Query: 140 LQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVG 199
+ + RI +I +L L R + +++ LD+ + LLV++R
Sbjct: 190 KLKTIPNDNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVYVRYAW 249
Query: 200 PELEVQEDLLTIINLTHHFSVGALMSAILESLQTA-GLSLQRMVGLTTTHTLRMIGENSG 258
+ + ED L +NLT H S + + + + L+ + G+T+ T M G++S
Sbjct: 250 QD-DFLEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNWKNCKGITSDGTATMTGKHSR 308
Query: 259 LVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVN--QIINTISEWIVLIKTRGVRRP 316
++ + E + WN F+H E L+S ++ N +++ + + IK +
Sbjct: 309 VIKKLLEVTNNGAVWNHC----FIHREGLASREIPQNLMEVLKNAVKVVNFIKGSSLNSR 364
Query: 317 EFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVSVGATTVH-FSDK 375
+T +E + H + + WL +GK L ++ LR E+ FL+ + F D
Sbjct: 365 LLETFCSEIGTNHTHLLYHTKIR-WLSQGKILSRVYELRNEIHFFLIEKKSHLASIFEDD 423
Query: 376 QWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEK--NLTD 433
W+ +L DI L ELS +L+ + I F L L+Q ++ +
Sbjct: 424 TWVTKLAYLTDIFSILNELSLKLQGKNSDVFQHVERIQGFRKTLLLWQVRLKSNRPSYYM 483
Query: 434 FPALREVVDELKQQNKEDEKIFDPDRYQMV--ICRLQKEFERHFKDLRF-IKKDLELFSN 490
FP + ++E N +E I + +++ + L + F F + +F ++ +
Sbjct: 484 FPRFLQHIEE----NIINENILKEIKLEILLHLTSLSQTFNHFFPEEKFETLRENSWVKD 539
Query: 491 PFNFKPEYAPISVRV------ELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVA 544
PF F+ + I + + EL +L ++ L N+Y L F+ + E +P++ +
Sbjct: 540 PFAFRHPESIIELNLVPEEENELLQLSSSYTLKNDYETLSLSAFWMKVK-EDFPLLSRKS 598
Query: 545 CKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
+ F + +CE FS LT+ + ++ + A+ RVA + P W++L+ +
Sbjct: 599 VLLLLPFTTTSLCELGFSILTQLK---TKERNGLNCAAVMRVALSSCVPDWNELMNRQ 653
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 107 bits (268), Expect = 2e-23
Identities = 131/576 (22%), Positives = 245/576 (42%), Gaps = 48/576 (8%)
Query: 45 LIVATRERDVRRHYEAEHEYYERYVADGERAALV-ERLRQGDLPVASFTPEERAARAGLG 103
+IV E D H++ E E R+ + ER VA +E+ A
Sbjct: 23 VIVKVEEEDEEDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTA-- 80
Query: 104 LCRLLALKGRGWGEGDFVYQCMEVLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRN 163
E + CM+++ + L+ + LS + +RI +I ++L
Sbjct: 81 ------------AEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEA 128
Query: 164 QLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGAL 223
L R + +++ LD+ +A LLV++R V + + EDLL +NL H + G
Sbjct: 129 MLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQD-DFVEDLLCCLNLNSHIT-GLD 186
Query: 224 MSAILES--LQTAGLSLQRMVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGF 281
+ LE+ L L+ + G+++ T M G++S L + E + WN F
Sbjct: 187 LFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWN----HCF 242
Query: 282 LHLELLSSYDV--DVNQIINTISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLN 339
+H E L S ++ + ++ + + IK + + +E H + +
Sbjct: 243 IHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEV- 301
Query: 340 NWLRRGKTLKLIFSLRKEMEAFLVSVGATTVH-FSDKQWLCDFGFLVDIMEHLRELSEEL 398
WL +GK L ++ LR E+ FLV + + F D W+ +L DI L ELS ++
Sbjct: 302 RWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKM 361
Query: 399 RVSKVFAAAAFDHICTFEVKLNLFQRHIEEK--NLTDFPALREVVDELKQQNKEDEKIFD 456
+ +HI F+ L L+Q ++ + FP L + ++E N +E
Sbjct: 362 QGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEE----NIINEDCLK 417
Query: 457 PDRYQMV--ICRLQKEFERHFKDLRF--IKKDLELFSNPFNFKPEYAPISVRV------E 506
+ +++ + L + F +F + +F +K+++ + +PF F+ + I + + E
Sbjct: 418 EIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM-KDPFAFQNPESIIELNLEPEEENE 476
Query: 507 LTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEKAFSYLTR 566
L +L ++ L N Y+I L F+ + + +P++ + + F + +CE FS LTR
Sbjct: 477 LLQLSSSFTLKNYYKILSLSAFWIKIK-DDFPLLSRKSILLLLPFTTTYLCELGFSILTR 535
Query: 567 NQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
+ L RVA + P W +L+ +
Sbjct: 536 LKTKKRNRLNS---APDMRVALSSCVPDWKELMNRQ 568
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 101 bits (252), Expect = 2e-21
Identities = 108/476 (22%), Positives = 210/476 (44%), Gaps = 26/476 (5%)
Query: 134 PEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYE----N 189
P+ LQ V LS D+ RI + +++ Q+ D KA L + Q + +
Sbjct: 130 PDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLE---DIKASPLKVGIQLAETTDMDDCS 186
Query: 190 YLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHT 249
L+ F+R + E E+ E+ L L + + + ++L + T
Sbjct: 187 QLMAFVRYI-KEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGA 245
Query: 250 LRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIK 309
M+GENS V+Y++++ P+ V H H ++ + + + T+ I IK
Sbjct: 246 SSMLGENSEFVAYVKKEI--PHIV-VTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIK 302
Query: 310 TRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVSVGATT 369
R FQ E E+ + + WL RG+ L IF + +E+ FL +
Sbjct: 303 GRAPNHRLFQAFFEEIGIEYSVLLFHTEMR-WLSRGQILTHIFEMYEEINQFLHHKSSNL 361
Query: 370 VH-FSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEE 428
V F +K++ +L D+ +HL ELS ++ + + +A + + F K +Q+ IE+
Sbjct: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421
Query: 429 KNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELF 488
+N T+FP L E++ ++E IF + + +L F +F + + + +
Sbjct: 422 RNFTNFPFLEEII------VSDNEGIFIAAEITLHLQQLSNFFHGYF-SIGDLNEASKWI 474
Query: 489 SNPFNFKPEYAPIS--VRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACK 546
+PF F ++ S ++ +L +L+A+ + E+ L F+ ++P + A +
Sbjct: 475 LDPFLFNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCA-QFTAFPNLAKTALE 533
Query: 547 VASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
+ F + +CE FS L H ++ + +L RVA ++ P + D++ ++
Sbjct: 534 ILMPFATTYLCELGFSSLL---HFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQK 586
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 100 bits (248), Expect = 5e-21
Identities = 111/475 (23%), Positives = 211/475 (44%), Gaps = 35/475 (7%)
Query: 140 LQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVG 199
++ + LS + RI + ++ +QL + R+ K ++L +D+ + ++ LL +IR +
Sbjct: 873 MKTIPLSNVTIQHRIDELSADIEDQLIQKVRESKWFALQIDESSEISNITLLLCYIRFID 932
Query: 200 PEL-EVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRMIGENSG 258
+ +V+E+LL I + + + I + + + L+ + VGL T M G SG
Sbjct: 933 YDCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKSLNWKHCVGLCTDGAASMTGRYSG 992
Query: 259 LVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVD--VNQIINTISEWIVLIKTRGVRRP 316
L + ++E A++ + F+H E L + + +++I+ ++ + IK+ +
Sbjct: 993 LKAKIQEVAMNTAAFTHC----FIHRERLVAEKLSPCLHKILLQSAQILSFIKSNALNSR 1048
Query: 317 EFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVSVGATTV-HFSDK 375
L E SEH + W+ RG+ LK +F LR E+E FL + +F D+
Sbjct: 1049 MLTILCEEMGSEHVS-LPLHAEVRWISRGRMLKRLFELRHEIEIFLSQKHSDLAKYFHDE 1107
Query: 376 QWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEKNLTDFP 435
+W+ +L DI + EL+ L+ + + I F+ KL ++ + +E + FP
Sbjct: 1108 EWVGKLAYLSDIFSLINELNLSLQGTLTTFFNLCNKIDVFKRKLKMWLKRTQENDYDMFP 1167
Query: 436 ALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLE----LFSNP 491
+ E N + D R +I + + F D ++DL +P
Sbjct: 1168 SFSEF------SNSSGLNMTDITR---IIFEHLEGLSQVFSDCFPPEQDLRSGNLWIIHP 1218
Query: 492 F-NFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASL 550
F N + +LT+L ++ L ++ + QF+ + SYP + A K
Sbjct: 1219 FMNHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQFWIN-AKTSYPELHERAMKFLLP 1277
Query: 551 FDSNQICEKAFSYLTRNQHTL---SQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
F + +C+ AFS LT ++ S P R+A T + P + LV+E+
Sbjct: 1278 FSTVYLCDAAFSALTESKQKNLLGSGP--------ALRLAVTSLIPRIEKLVKEK 1324
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 96.7 bits (239), Expect = 6e-20
Identities = 116/500 (23%), Positives = 213/500 (42%), Gaps = 42/500 (8%)
Query: 121 VYQCMEVLLREVLPEHVSV-LQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLAL 179
V C++ + E+L E + + V LS D +RI + ++ +QL + + K +SL L
Sbjct: 844 VKDCIKEVCLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQL 903
Query: 180 DDQAFVAYENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESL-QTAGLSL 238
D+ +A LLV++R + +++E+ +L + + L A+ + GL
Sbjct: 904 DECRDIANMIILLVYVRFEHDD-DIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEF 962
Query: 239 QRMVGLTTTHTLRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLS--SYDVDVNQ 296
+ VG+ + M G++S +V+ ++E ++P C H F+H E L+ ++N
Sbjct: 963 KFCVGVCSDGAASMTGKHSEVVTQIKE--LAPEC-KTTHC--FIHRESLAMKKISAELNS 1017
Query: 297 IINTISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRK 356
++N I + + IK+ + F L E++H + + + WL RGK L +F +R
Sbjct: 1018 VLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEI-RWLSRGKVLSRMFEIRN 1076
Query: 357 EMEAFLVSVGAT-TVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTF 415
E+ FL + F D W +L DI +L+ ++ + D +
Sbjct: 1077 ELLVFLQGKKPMWSQLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQ 1136
Query: 416 EVKLNLFQRHIEEKNLTDFPALREVVDELKQQNKED----EKIFDPDRYQMVICRLQKEF 471
+ KL ++ I F L +++E+ N D K+ ++ C F
Sbjct: 1137 KQKLEAWKNRISTDCYDMFHNLTTIINEV--GNDLDIAHLRKVISEHLTNLLEC-----F 1189
Query: 472 ERHFKDLRFIKKDLELFSNPFNFKPEYAPISVRVE--LTKLQANTNLWNEY-RIKDLGQF 528
E +F + NPF + ++V ++ L KL + L + L F
Sbjct: 1190 EFYFPSKEDPRIGNLWIQNPFLSSKDNLNLTVTLQDKLLKLATDEGLKISFENTASLPSF 1249
Query: 529 YAGLSAESYPIIKGVACKVASLFDSNQICEKAFSYLT------RNQHTLSQPLTDEHLQA 582
+ + YP + +A K+ LF S +CE FS L+ RN + PL
Sbjct: 1250 WI-KAKNDYPELAEIALKLLLLFPSTYLCETGFSTLSVIKTKHRNSLNIHYPL------- 1301
Query: 583 LFRVATTEMEPGWDDLVRER 602
RVA + ++P D L ++
Sbjct: 1302 --RVALSSIQPRLDKLTSKK 1319
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 32.7 bits (73), Expect = 0.99
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 13 DEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEHEY 64
D + W YL+ P G +C+VC + + ++RH +H Y
Sbjct: 100 DHRRYYHDHWRLEYLMDFNPARHGMVCMVCGSSLATLKLSTIKRHIRQKHPY 151
Score = 32.0 bits (71), Expect = 1.7
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 5 PKRSKMEVDEALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEHEY 64
P RS+ ++ ++P W YL+ G +C+VC + + ++RH H +
Sbjct: 571 PPRSR---EQRRNYQPRWRGEYLMDYDGSRRGLVCMVCGGALATLKVSTIKRHILQVHPF 627
Query: 65 YERYVADGERAALVERLRQGDLPV---ASFTPEERAARAG 101
+ + ER ++E + L F P A R G
Sbjct: 628 SMDFTPE-ERQTILEAYEEAALRCYGHEGFGPPAPAPRDG 666
>gi|39930523 hypothetical protein LOC144097 [Homo sapiens]
Length = 381
Score = 32.0 bits (71), Expect = 1.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 22 WTQRYLVVEPPEGDG-ALCLVCRRLIVATRERDVRRHYEAEHEYYERYVADGERAALVER 80
W Q +LV P G G ALC+VC I A R H +H + ++ E++ ++E
Sbjct: 73 WEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHP-HTLDLSPSEKSNILEA 131
Query: 81 LRQG 84
+G
Sbjct: 132 WSEG 135
>gi|38045919 huntingtin interacting protein 1 [Homo sapiens]
Length = 1037
Score = 31.6 bits (70), Expect = 2.2
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 411 HICTFEVKLNLFQRHIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKE 470
H+ E L Q+H+ ++ D LR +DEL++Q ++ EK R I R +
Sbjct: 408 HVSELEADL-AEQQHLRQQAADDCEFLRAELDELRRQREDTEK---AQRSLSEIERKAQA 463
Query: 471 FERHFKDLRFIKKDLELFSNPFNFKPEYAPISVRVELTKLQANTNLWNE--------YRI 522
E+ + L+ +K EL N + + A ++ +V + + QA +L E RI
Sbjct: 464 NEQRYSKLK--EKYSELVQNHADLLRKNAEVTKQVSMAR-QAQVDLEREKKELEDSLERI 520
Query: 523 KDLGQ 527
D GQ
Sbjct: 521 SDQGQ 525
>gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens]
Length = 791
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 370 VHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICT--------------- 414
V++S ++LC F L ++ H E+ ++ VF F HI T
Sbjct: 27 VNYSLLKFLCRF--LANVASHHEEIWSANSLAAVFGPDVF-HIYTDVEDMKEQEIVSRIM 83
Query: 415 ---FEVKLNLFQRHIEEKNLTDFPALREVVDELKQQNKEDEKI 454
E F+ E+ + D ++ E V+EL ++ +EDEK+
Sbjct: 84 AGLLENYYEFFENEEEDFSSNDLSSITEQVNELSEEEEEDEKL 126
>gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]
Length = 887
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 370 VHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICT--------------- 414
V++S ++LC F L ++ H E+ ++ VF F HI T
Sbjct: 145 VNYSLLKFLCRF--LANVASHHEEIWSANSLAAVFGPDVF-HIYTDVEDMKEQEIVSRIM 201
Query: 415 ---FEVKLNLFQRHIEEKNLTDFPALREVVDELKQQNKEDEKI 454
E F+ E+ + D ++ E V+EL ++ +EDEK+
Sbjct: 202 AGLLENYYEFFENEEEDFSSNDLSSITEQVNELSEEEEEDEKL 244
>gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens]
Length = 915
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 370 VHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICT--------------- 414
V++S ++LC F L ++ H E+ ++ VF F HI T
Sbjct: 145 VNYSLLKFLCRF--LANVASHHEEIWSANSLAAVFGPDVF-HIYTDVEDMKEQEIVSRIM 201
Query: 415 ---FEVKLNLFQRHIEEKNLTDFPALREVVDELKQQNKEDEKI 454
E F+ E+ + D ++ E V+EL ++ +EDEK+
Sbjct: 202 AGLLENYYEFFENEEEDFSSNDLSSITEQVNELSEEEEEDEKL 244
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 30.8 bits (68), Expect = 3.8
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
Query: 291 DVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKL 350
DV N+II + LI+ + + ++++ E E + + + + L+L
Sbjct: 1032 DVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKEN--IEMTIENQEELRL 1089
Query: 351 IFS-LRKEMEAFLVSVGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAF 409
+ L+K+ E + CD L ++ E L+E S++L+ +
Sbjct: 1090 LGDELKKQQEIVAQEKNHAIKKEGELSRTCDR--LAEVEEKLKEKSQQLQEKQQQLLNVQ 1147
Query: 410 DHICTFEVKLNLFQR---HIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICR 466
+ + + K+N + ++ K LT E ++ ++ N+ E++ + + V+
Sbjct: 1148 EEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKE 1207
Query: 467 LQKEFERHFKDLRFIKKDLE 486
LQK FE LR +++E
Sbjct: 1208 LQKSFETERDHLRGYIREIE 1227
>gi|37674210 slingshot 2 [Homo sapiens]
Length = 1423
Score = 30.4 bits (67), Expect = 4.9
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 277 HYSGFLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTE--SESEHGERVN 334
+Y G L L +S Y+ +N ++++EW + + RP+ L T+ +E E ER+
Sbjct: 196 YYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQS-HRPDSPALFTDIPTERERTERLI 254
Query: 335 GRCLNNWLRRGKTLKLIFS--LRKEMEAFLVSVGATTVHFSDKQWLCDFGFL---VDIME 389
L + + K L+ I S +R E+E +V F D + + G + I E
Sbjct: 255 KTKLREIMMQ-KDLENITSKEIRTELEMQMVCNLREFKEFIDNEMIVILGQMDSPTQIFE 313
Query: 390 HL 391
H+
Sbjct: 314 HV 315
>gi|68448528 mesothelin-like [Homo sapiens]
Length = 1053
Score = 30.4 bits (67), Expect = 4.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 69 VADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWG 116
V + + A + R QGD+ + S P++R A L + L G GWG
Sbjct: 452 VREADCRAFIRRAAQGDVELLSHLPDQRVA---LWRAAVACLVGAGWG 496
>gi|21450665 coiled-coil domain containing 138 [Homo sapiens]
Length = 665
Score = 30.4 bits (67), Expect = 4.9
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 421 LFQRHIEEKNL-TDFPALREVVDELKQQ----NKEDEKI-FDPDRYQMVICRLQKEFERH 474
L +++ E K L + F AL+E+ D LK+Q ++E+ KI R Q + LQ+++E
Sbjct: 258 LKEKNKETKRLRSSFDALKELNDTLKKQLNEASEENRKIDIQAKRVQARLDNLQRKYE-- 315
Query: 475 FKDLRFIKKDLELFSNPFNFKPEYAPIS 502
F ++ +K + K E AP+S
Sbjct: 316 FMTIQRLKGSSHAVHEMKSLKQEKAPVS 343
>gi|223029480 hypothetical protein LOC255352 [Homo sapiens]
Length = 405
Score = 30.0 bits (66), Expect = 6.4
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 435 PALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSNPFNF 494
P+L ++++ L Q +ED++ +++ C LQ R + RF S F
Sbjct: 154 PSLSQIINVLSQTEEEDKEWRAELMLELLECYLQA--GRKEEAARFC-------STAAPF 204
Query: 495 KPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESY-PIIKGVACKVASLFDS 553
+ P R ++ + L +E ++K+ + LS Y ++K A + D
Sbjct: 205 IKSHVPQKYR-QIFSVMVRHELMDELQLKEEKKNSISLSVTFYINMLKAKAEQNDLPGDI 263
Query: 554 NQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVA 587
N I KA+ +L H +++E + LF +A
Sbjct: 264 NVILRKAYRHLGHYNHQRFPSISEEKMLLLFELA 297
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 29.6 bits (65), Expect = 8.4
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 13/70 (18%)
Query: 423 QRHIEEKNLTDFP-ALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFI 481
Q IEEK+L D AL++ V EL+Q NK+ +K + ++ R +K+ E + +
Sbjct: 582 QTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQ------RARKDLE------KLV 629
Query: 482 KKDLELFSNP 491
+K L+ ++P
Sbjct: 630 RKVLKNMNDP 639
>gi|4505573 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 29.6 bits (65), Expect = 8.4
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 13/70 (18%)
Query: 423 QRHIEEKNLTDFP-ALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFI 481
Q IEEK+L D AL++ V EL+Q NK+ +K + ++ R +K+ E + +
Sbjct: 582 QTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQ------RARKDLE------KLV 629
Query: 482 KKDLELFSNP 491
+K L+ ++P
Sbjct: 630 RKVLKNMNDP 639
>gi|58197558 tudor domain containing 6 [Homo sapiens]
Length = 2096
Score = 29.6 bits (65), Expect = 8.4
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 370 VHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQR----- 424
+H DKQ D ++++I++ R + E +SKV A A + FE K N+
Sbjct: 631 IHILDKQ---DHQYVIEILDESR--TGEENISKVIAQAGYAKYQEFETKENILVNAHSPG 685
Query: 425 HIE-----EKNLTDFPALREVVDELKQQNK 449
H+ E N F E + K++NK
Sbjct: 686 HVSNHFTTESNKIPFAKTGEGEQKAKRENK 715
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,909,632
Number of Sequences: 37866
Number of extensions: 953400
Number of successful extensions: 2232
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2185
Number of HSP's gapped (non-prelim): 33
length of query: 607
length of database: 18,247,518
effective HSP length: 108
effective length of query: 499
effective length of database: 14,157,990
effective search space: 7064837010
effective search space used: 7064837010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.