BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7661948 malectin [Homo sapiens] (292 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7661948 malectin [Homo sapiens] 591 e-169 gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens] 33 0.23 gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens] 33 0.30 gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens] 33 0.30 gi|156564398 target of EGR1, member 1 (nuclear) [Homo sapiens] 33 0.30 gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho... 33 0.39 gi|119943096 dopamine receptor interacting protein [Homo sapiens] 32 0.86 gi|148728188 integrin, alpha E precursor [Homo sapiens] 31 1.1 gi|162287219 prune homolog 2 [Homo sapiens] 31 1.1 gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] 31 1.1 gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 31 1.5 gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 31 1.5 gi|118498366 hypothetical protein LOC283635 isoform 2 [Homo sapi... 31 1.5 gi|118498371 hypothetical protein LOC283635 isoform 1 [Homo sapi... 31 1.5 gi|38373682 pleckstrin homology domain containing family G membe... 31 1.5 gi|111154084 pleckstrin homology domain containing family G memb... 31 1.5 gi|111154088 pleckstrin homology domain containing family G memb... 31 1.5 gi|111154080 pleckstrin homology domain containing family G memb... 31 1.5 gi|111154078 pleckstrin homology domain containing family G memb... 31 1.5 gi|4585710 ADAM metallopeptidase domain 11 preproprotein [Homo s... 31 1.5 gi|22748973 protein interacting with cyclin A1 [Homo sapiens] 30 1.9 gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 30 1.9 gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 30 1.9 gi|155722990 solute carrier family 4 (anion exchanger), member 1... 30 2.5 gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 30 2.5 gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 30 3.3 gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo s... 30 3.3 gi|29029632 anaplastic lymphoma kinase [Homo sapiens] 30 3.3 gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 30 3.3 gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 30 3.3 >gi|7661948 malectin [Homo sapiens] Length = 292 Score = 591 bits (1524), Expect = e-169 Identities = 292/292 (100%), Positives = 292/292 (100%) Query: 1 MLGAWAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHV 60 MLGAWAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHV Sbjct: 1 MLGAWAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHV 60 Query: 61 DVHGIHFRKDPLEGRVGRASDYGMKLPILRSNPEDQILYQTERYNEETFGYEVPIKEEGD 120 DVHGIHFRKDPLEGRVGRASDYGMKLPILRSNPEDQILYQTERYNEETFGYEVPIKEEGD Sbjct: 61 DVHGIHFRKDPLEGRVGRASDYGMKLPILRSNPEDQILYQTERYNEETFGYEVPIKEEGD 120 Query: 121 YVLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSV 180 YVLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSV Sbjct: 121 YVLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSV 180 Query: 181 QGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYD 240 QGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYD Sbjct: 181 QGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYD 240 Query: 241 EGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL 292 EGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL Sbjct: 241 EGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL 292 >gi|94536798 high mobility group AT-hook 1-like 4 [Homo sapiens] Length = 356 Score = 33.5 bits (75), Expect = 0.23 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Query: 215 VDDVPKLQPHP------GLEKKEEEEEEE--------EYDEGSNLKKQTNKNRVQSGPRT 260 +D+ L P P GL +EEEEE+ E D+ +LKK+ N+ + + R Sbjct: 123 LDEDSNLSPSPLRDLSGGLGGQEEEEEQRWLDALEKGELDDNGDLKKEINERLLTARQRA 182 Query: 261 PNPYASDNSSLMFPILVAFGVFIPTL 286 A S M P+ VA G P L Sbjct: 183 LLQKARSQPSPMLPLPVAEGCPPPAL 208 >gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens] Length = 835 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 219 PKLQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSG 257 P L P G E++EE++EEEE +E ++ T RV G Sbjct: 476 PNLIPENGDEEEEEDDEEEEEEEEEEEEELTESERVDYG 514 >gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens] Length = 773 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 219 PKLQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSG 257 P L P G E++EE++EEEE +E ++ T RV G Sbjct: 476 PNLIPENGDEEEEEDDEEEEEEEEEEEEELTESERVDYG 514 >gi|156564398 target of EGR1, member 1 (nuclear) [Homo sapiens] Length = 510 Score = 33.1 bits (74), Expect = 0.30 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 216 DDVPKLQPHPGLEKKEEEEEEEEYDEGSNL--KKQTNKNRVQSGPRTPNPYASDNSSLMF 273 D PK Q K EE E+E DE NL KQ NKN ++ G + P +D ++ Sbjct: 363 DGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSEV 422 Query: 274 P 274 P Sbjct: 423 P 423 >gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Homo sapiens] Length = 1034 Score = 32.7 bits (73), Expect = 0.39 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 206 CALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYA 265 C L D +QP P +E++EEEEEEE G N+ +++ + G + Y Sbjct: 856 CCLNAPVSACDPQDDVQP-PEVEEEEEEEEEEGEAAGENIGEKSESREEKLGDSLQDLYR 914 Query: 266 SDNSSLMFPI 275 + + + P+ Sbjct: 915 ALEQASLSPL 924 >gi|119943096 dopamine receptor interacting protein [Homo sapiens] Length = 702 Score = 31.6 bits (70), Expect = 0.86 Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 232 EEEEEEEYDEGSNLKKQTNKNRVQSGPRTPN 262 E+E EEEYD+ +LK ++ +RV SG + P+ Sbjct: 164 EDELEEEYDDEESLKFPSDFSRVSSGKKPPS 194 >gi|148728188 integrin, alpha E precursor [Homo sapiens] Length = 1179 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/29 (51%), Positives = 19/29 (65%) Query: 213 GTVDDVPKLQPHPGLEKKEEEEEEEEYDE 241 G DDV + LEK+EEE++EEE DE Sbjct: 166 GGEDDVNTARQRRALEKEEEEDKEEEEDE 194 >gi|162287219 prune homolog 2 [Homo sapiens] Length = 3088 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 226 GLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYAS---DNSS 270 G E K+ EE D +Q+++NR+ SGP + +AS DNSS Sbjct: 995 GFESKDGNSTAEETDIPPQSLQQSSRNRISSGPGNLDMWASPHTDNSS 1042 >gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] Length = 645 Score = 31.2 bits (69), Expect = 1.1 Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Query: 5 WAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHVDVHG 64 W V G RLLLLLLP PG A A AAGAG +V AV EA G Sbjct: 29 WRVPG------RLLLLLLPALCCLPGAARA-AAAAAGAGNRAAVAVAVARADEAEAPFAG 81 Query: 65 IHFRK 69 ++ K Sbjct: 82 QNWLK 86 >gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapiens] Length = 123 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/26 (50%), Positives = 19/26 (73%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNR 253 E++EEE+EEEE +EG KK+ + R Sbjct: 80 EEEEEEKEEEEKEEGRRRKKKKKRRR 105 >gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4 [Homo sapiens] Length = 2073 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNP 263 E++EEEEEE+E +E +++ +N S PR P Sbjct: 1081 EEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKP 1116 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/31 (38%), Positives = 21/31 (67%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGP 258 E++EEEEEEE+ +E +++ + +QS P Sbjct: 1080 EEEEEEEEEEDEEEEEEEEEEEEEENIQSSP 1110 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/40 (35%), Positives = 23/40 (57%) Query: 221 LQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRT 260 ++P E++EEEEEEEE +EG + N + G ++ Sbjct: 1348 IKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKS 1387 Score = 28.1 bits (61), Expect = 9.5 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Query: 216 DDVPKLQPHPGLEKKEEEEEEEEYDE----GSNLKKQTNKNRVQ 255 DD+ K + E++EEEEEEEE E G N++K + + Q Sbjct: 1345 DDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQ 1388 >gi|118498366 hypothetical protein LOC283635 isoform 2 [Homo sapiens] Length = 213 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/28 (50%), Positives = 19/28 (67%) Query: 229 KKEEEEEEEEYDEGSNLKKQTNKNRVQS 256 KKEEEEEEEE +KQ +N++Q+ Sbjct: 143 KKEEEEEEEENRMSEEAEKQYQQNKLQT 170 >gi|118498371 hypothetical protein LOC283635 isoform 1 [Homo sapiens] Length = 236 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/28 (50%), Positives = 19/28 (67%) Query: 229 KKEEEEEEEEYDEGSNLKKQTNKNRVQS 256 KKEEEEEEEE +KQ +N++Q+ Sbjct: 166 KKEEEEEEEENRMSEEAEKQYQQNKLQT 193 >gi|38373682 pleckstrin homology domain containing family G member 5 isoform a [Homo sapiens] Length = 1006 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILV 277 E++EEEEEEE D G++ R SG ASD S+ ++V Sbjct: 714 EEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVV 763 >gi|111154084 pleckstrin homology domain containing family G member 5 isoform b [Homo sapiens] Length = 1083 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILV 277 E++EEEEEEE D G++ R SG ASD S+ ++V Sbjct: 791 EEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVV 840 >gi|111154088 pleckstrin homology domain containing family G member 5 isoform a [Homo sapiens] Length = 1006 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILV 277 E++EEEEEEE D G++ R SG ASD S+ ++V Sbjct: 714 EEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVV 763 >gi|111154080 pleckstrin homology domain containing family G member 5 isoform a [Homo sapiens] Length = 1006 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILV 277 E++EEEEEEE D G++ R SG ASD S+ ++V Sbjct: 714 EEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVV 763 >gi|111154078 pleckstrin homology domain containing family G member 5 isoform c [Homo sapiens] Length = 1062 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILV 277 E++EEEEEEE D G++ R SG ASD S+ ++V Sbjct: 770 EEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVV 819 >gi|4585710 ADAM metallopeptidase domain 11 preproprotein [Homo sapiens] Length = 769 Score = 30.8 bits (68), Expect = 1.5 Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 13 ALLRLLLLLLPPAIRGPGLGVAGVAGA---------AGAGLPE----SVIWAVNAGGEAH 59 A LLL LLP PGLG G AGA G G PE S + ++GGE Sbjct: 8 AFAALLLSLLPT----PGLGTQGPAGALRWGGLPQLGGPGAPEVTEPSRLVRESSGGEVR 63 Query: 60 VDVHGIHFRKDPLEGRVGRASDYGMKLPILRSN 92 R++P G + +P SN Sbjct: 64 KQQLDTRVRQEPPGGPPVHLAQVSFVIPAFNSN 96 >gi|22748973 protein interacting with cyclin A1 [Homo sapiens] Length = 336 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/27 (44%), Positives = 21/27 (77%) Query: 228 EKKEEEEEEEEYDEGSNLKKQTNKNRV 254 +KKE+E+++EE DE + LKK+ K ++ Sbjct: 210 KKKEKEKDKEEMDEKAKLKKKAKKGQL 236 >gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] Length = 1812 Score = 30.4 bits (67), Expect = 1.9 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 34/131 (25%) Query: 155 IFDRVGHSTAHDEIIPMSIR-KGKLSVQGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAG 213 +FDR+G S +DE + R K++ G V ++G+Y+ C + G Sbjct: 83 VFDRLG-SLEYDENTSIIFRPNSKVNTDGLV-----------LRGWYN----CLTLAIYG 126 Query: 214 TVDDV---------------PKLQPHPGLEK--KEEEEEEEEYDEGSNLKKQTNKNRVQS 256 +VD V P QP P L++ K + E+E+ GS + Q R Sbjct: 127 SVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPP 186 Query: 257 GPRTPNPYASD 267 GP P+ D Sbjct: 187 GPPPPDDDEDD 197 >gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] Length = 1147 Score = 30.4 bits (67), Expect = 1.9 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 34/131 (25%) Query: 155 IFDRVGHSTAHDEIIPMSIR-KGKLSVQGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAG 213 +FDR+G S +DE + R K++ G V ++G+Y+ C + G Sbjct: 83 VFDRLG-SLEYDENTSIIFRPNSKVNTDGLV-----------LRGWYN----CLTLAIYG 126 Query: 214 TVDDV---------------PKLQPHPGLEK--KEEEEEEEEYDEGSNLKKQTNKNRVQS 256 +VD V P QP P L++ K + E+E+ GS + Q R Sbjct: 127 SVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPP 186 Query: 257 GPRTPNPYASD 267 GP P+ D Sbjct: 187 GPPPPDDDEDD 197 >gi|155722990 solute carrier family 4 (anion exchanger), member 1, adaptor protein [Homo sapiens] Length = 796 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 11/50 (22%) Query: 210 IMAGTVDDVPKLQPH-----------PGLEKKEEEEEEEEYDEGSNLKKQ 248 + GTV +P +P P +E++EEEEEEEE ++ + KK+ Sbjct: 619 LKTGTVGKLPPKRPELPPTLMRMKDEPEVEEEEEEEEEEEKEKEEHEKKK 668 >gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] Length = 587 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 210 IMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDE 241 ++A DD + + G E++EE EEEEE DE Sbjct: 353 VLASLSDDEDEEEEEEGEEEEEEAEEEEEEDE 384 >gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo sapiens] Length = 2506 Score = 29.6 bits (65), Expect = 3.3 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 12/66 (18%) Query: 201 DNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRT 260 D P C + V P P +K+EE++EEEE D G + GP+ Sbjct: 1169 DIPPACPPPLNHTVVQVNKNANPDPLPKKEEEKKEEEEDDRG------------EDGPKP 1216 Query: 261 PNPYAS 266 PY+S Sbjct: 1217 MPPYSS 1222 >gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo sapiens] Length = 2261 Score = 29.6 bits (65), Expect = 3.3 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 12/66 (18%) Query: 201 DNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDEGSNLKKQTNKNRVQSGPRT 260 D P C + V P P +K+EE++EEEE D G + GP+ Sbjct: 1170 DIPPACPPPLNHTVVQVNKNANPDPLPKKEEEKKEEEEDDRG------------EDGPKP 1217 Query: 261 PNPYAS 266 PY+S Sbjct: 1218 MPPYSS 1223 >gi|29029632 anaplastic lymphoma kinase [Homo sapiens] Length = 1620 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/35 (48%), Positives = 20/35 (57%) Query: 11 AVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLP 45 A+ LL LL LLL A G G+G AG+ AG P Sbjct: 3 AIGLLWLLPLLLSTAAVGSGMGTGQRAGSPAAGPP 37 >gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Homo sapiens] Length = 249 Score = 29.6 bits (65), Expect = 3.3 Identities = 11/20 (55%), Positives = 17/20 (85%) Query: 226 GLEKKEEEEEEEEYDEGSNL 245 GL+ +EE+E+EEEYDE + + Sbjct: 166 GLDDEEEDEDEEEYDEDAQV 185 >gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Homo sapiens] Length = 272 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%) Query: 216 DDVPKLQPHPGLEKKE------EEEEEEEYDEGSNLKKQTN 250 D+V + + GL+K E E+EEEEE +G N K++T+ Sbjct: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.139 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,073,951 Number of Sequences: 37866 Number of extensions: 597035 Number of successful extensions: 7647 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 6412 Number of HSP's gapped (non-prelim): 917 length of query: 292 length of database: 18,247,518 effective HSP length: 101 effective length of query: 191 effective length of database: 14,423,052 effective search space: 2754802932 effective search space used: 2754802932 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.