Search of human proteins with 7661662

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
         (795 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7661662 protocadherin beta 5 precursor [Homo sapiens]             1570   0.0  
gi|9256618 protocadherin beta 6 precursor [Homo sapiens]             1218   0.0  
gi|9256616 protocadherin beta 4 precursor [Homo sapiens]             1216   0.0  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]            1194   0.0  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]             1190   0.0  
gi|14195605 protocadherin beta 16 precursor [Homo sapiens]           1182   0.0  
gi|9256608 protocadherin beta 14 precursor [Homo sapiens]            1181   0.0  
gi|9256612 protocadherin beta 2 precursor [Homo sapiens]             1168   0.0  
gi|9256606 protocadherin beta 12 precursor [Homo sapiens]            1161   0.0  
gi|9256604 protocadherin beta 11 precursor [Homo sapiens]            1160   0.0  
gi|11276081 protocadherin beta 8 precursor [Homo sapiens]            1152   0.0  
gi|11036656 protocadherin beta 7 precursor [Homo sapiens]            1146   0.0  
gi|11036654 protocadherin beta 13 precursor [Homo sapiens]           1139   0.0  
gi|14195616 protocadherin beta 9 precursor [Homo sapiens]            1130   0.0  
gi|9256602 protocadherin beta 10 precursor [Homo sapiens]            1124   0.0  
gi|14195607 protocadherin beta 1 precursor [Homo sapiens]             776   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...   647   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...   647   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...   644   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...   644   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...   641   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...   641   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...   635   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...   635   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...   634   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...   634   0.0  
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs...   631   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   631   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...   630   e-180
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...   630   e-180

>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
          Length = 795

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 795/795 (100%), Positives = 795/795 (100%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA
Sbjct: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
           TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD
Sbjct: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
           ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI 300
           EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI 300

Query: 301 RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP 360
           RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP
Sbjct: 301 RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP 360

Query: 361 ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI 420
           ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI
Sbjct: 361 ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI 420

Query: 421 TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 480
           TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG
Sbjct: 421 TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 480

Query: 481 TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL 540
           TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL
Sbjct: 481 TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL 540

Query: 541 SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 600
           SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW
Sbjct: 541 SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 600

Query: 601 LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 660
           LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL
Sbjct: 601 LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 660

Query: 661 LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS 720
           LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS
Sbjct: 661 LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS 720

Query: 721 VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGE 780
           VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGE
Sbjct: 721 VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGE 780

Query: 781 EIGKTAAFRNSFGLN 795
           EIGKTAAFRNSFGLN
Sbjct: 781 EIGKTAAFRNSFGLN 795


>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
          Length = 794

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 614/783 (78%), Positives = 684/783 (87%)

Query: 10  QKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYK 69
           +KRQV F  +L+L  E GSE+++YS+ EETESG  VANL KDLGL VGELA+RGAR+ +K
Sbjct: 9   KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68

Query: 70  GNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDH 129
           GN++ LQ D +T +LLL EKLDRE +CG+TEPC+L FQ+LLENP+QFFQ  L++ DINDH
Sbjct: 69  GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128

Query: 130 APEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGR 189
           APEFP +EMLLKI E T PG +FPLK+A D D GSN +Q YTIS N HFHV T NR +GR
Sbjct: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188

Query: 190 KYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEV 249
           K+PELVLDK LDREE+P+L LTL ALDGG+PPRSGT+ I+I VLD NDN PEF Q  YE 
Sbjct: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248

Query: 250 QVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEIRLKRALDFE 309
           QVPEN+PL SLV+ VSARDLDAG++G V+YALFQ D+V QPF I+  T EIRL++ALDFE
Sbjct: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFE 308

Query: 310 ATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVFSV 369
               Y+V++ ATDGGGLSGKC++ + V+DVNDNAPELTMS   S  PEN PE  VAVFSV
Sbjct: 309 EIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSV 368

Query: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
           SD DSG N ++ICSI+N+LPFLL+P+++NFYTLVT+  LDRES+AEYNITITVTD+GTPR
Sbjct: 369 SDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPR 428

Query: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
           LKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYSL
Sbjct: 429 LKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSL 488

Query: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
           LPPQ+PHL L+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPALSSEALVR+L
Sbjct: 489 LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLL 548

Query: 550 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
           VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 549 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 608

Query: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
           E GLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY
Sbjct: 609 ELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 668

Query: 670 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEG 729
           LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPEG
Sbjct: 669 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEG 728

Query: 730 PFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAAFR 789
           PFPGHLVDVSGTGTLSQSY Y+VCLTG S   EFKFLKPI+PN  PQG   E+ +T   R
Sbjct: 729 PFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSR 788

Query: 790 NSF 792
           NSF
Sbjct: 789 NSF 791


>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
          Length = 795

 Score = 1216 bits (3147), Expect = 0.0
 Identities = 615/788 (78%), Positives = 686/788 (87%), Gaps = 1/788 (0%)

Query: 5   LAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGA 64
           L +    RQV+   +++ L +   E +RYS+ EETESG  VA+LAKDLGLG+GELA+R A
Sbjct: 4   LGRIHPNRQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSA 63

Query: 65  RMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLT 124
           R+    +K+ LQLD +TG+LLL EKLDRE +CG  EPC+LHFQ+ LE PVQFFQ +L + 
Sbjct: 64  RVLSDDDKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQ 123

Query: 125 DINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHN 184
           DINDH+P FPE+E+LLKI E++QPGT+FPL IA+D D+GSN +Q YTISPNSHFH+ T N
Sbjct: 124 DINDHSPIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRN 183

Query: 185 RGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQ 244
             +G+KYP+LV DK LDREE+PE SLTL ALDGG+PPRSGT  +RI+++D NDNAPEF+ 
Sbjct: 184 HSEGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVH 243

Query: 245 SFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIRLK 303
           + Y VQV ENSPL+S +V V ARD+DAG +GSV+Y LFQ  DE+ Q F I+E T EI LK
Sbjct: 244 TPYGVQVLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLK 303

Query: 304 RALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETV 363
           + LDFE    Y+VEI ATDGGGLSGK TV IEVVDVNDN PEL +S+L+S  PENAPETV
Sbjct: 304 KKLDFEKIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETV 363

Query: 364 VAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVT 423
           V++F + D DSG+NG+MICSI ++LPF+LKPTLKNFYTLVT+R LDRE+ AEYNITI VT
Sbjct: 364 VSIFRIRDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVT 423

Query: 424 DMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 483
           D+GTPRLKT+ NITV VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA
Sbjct: 424 DLGTPRLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 483

Query: 484 QVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSE 543
           QVTYSLLPPQ+PHL LASLVSINADNGHLFALRSLDYEALQAFEFRVGA+DRGSPALSSE
Sbjct: 484 QVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSE 543

Query: 544 ALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 603
           ALVRVLVLD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY
Sbjct: 544 ALVRVLVLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 603

Query: 604 QLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVD 663
           QLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVD
Sbjct: 604 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVD 663

Query: 664 GFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR 723
           GFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR
Sbjct: 664 GFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR 723

Query: 724 CSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIG 783
           CSVPEGPFPGHLVDVSGTGTLSQSY YEVCLTGDSG GEFKFLKPI PNLL Q  G E+ 
Sbjct: 724 CSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVK 783

Query: 784 KTAAFRNS 791
           +   FRNS
Sbjct: 784 ENPKFRNS 791


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score = 1194 bits (3089), Expect = 0.0
 Identities = 598/777 (76%), Positives = 681/777 (87%), Gaps = 1/777 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME A  + P++RQV+ L +LL +  AG E  RYS+ EETE G  VANLA DLGLGVGELA
Sbjct: 1   MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
            RGAR+  + N++ LQLD++TG L+L EKLDRE +CG TEPCI+HFQ+LL+ P++ F+ +
Sbjct: 61  ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L +TDINDH+PEFPE+EM LKIPE++  GTVFPLK A+D D+GSN VQNY ISPNSHFHV
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
           +T  RGDGRKYPELVLD  LDREE+ EL LTLTA+DGG+PPRSGT  I I+VLD NDNAP
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALF-QGDEVTQPFVIDEKTAE 299
           EF+Q+ YEVQVPENSP+ SLVV VSARDLD G  G ++Y+L+    E+ +PF +   + E
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           IRL + LDFE    Y+++I A+DGGGLSGKC+V+++V+DVNDN PEL++S+L+SP PEN+
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           PET VA+F + D DSG+NG+MICSIQ+D+PF LKP+++NFY LVT+  LDRE++AEYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           IT+TD+GTPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQVTYSLLPP++PHL L SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQ 776
           SVGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVCLTG S + +FKFLKPI PN++ Q
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQ 777


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 1190 bits (3079), Expect = 0.0
 Identities = 604/793 (76%), Positives = 685/793 (86%), Gaps = 1/793 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME    +  ++RQV+ L + L    AGSE+ RYS+ EE E G+ +ANLAKDLGL V ELA
Sbjct: 1   MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
            RGA++  KGNK+  QL  +TG+LLL EKLDRE +CG TEPCILHFQ+LL+NP+QF   +
Sbjct: 61  ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L++ D+NDH+P F E EM LKI EST PGTV PL  A+D D+G N++QNYTI+PNSHFHV
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
            T +R DGRKYPELVLDKALDREE+PELSLTLTALDGG+PPRSGT  I I VLD NDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAE 299
           EF Q  YEV V EN+P+NS++V VSA DLD G++G+++YA F   +E+ + F ++  T +
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           ++L + L+FEA   Y V+I A DGGGLSGK TV ++VVDVNDN PELT+S+++SP PEN+
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
            ETV+AVFSVSD DSGDNGR++CSI+N+LPF LKP+++NFYTLV++  LDRE+++EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           IT+TD+GTPRLKT++NITVLVSDVNDNAPAFTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQVTYSLLPPQ+PHL L+SLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
           SVGRCSVPEGPFPG +VDVSGTGTLSQSY YEVCLTG SG  EFKFLKPIIPN + QGA 
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780

Query: 780 EEIGKTAAFRNSF 792
                  +FR SF
Sbjct: 781 RVSEANPSFRKSF 793


>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
          Length = 776

 Score = 1182 bits (3058), Expect = 0.0
 Identities = 596/776 (76%), Positives = 666/776 (85%), Gaps = 1/776 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME       ++RQV+   +LL L  AG+E   YS+ EETE G  VANL KDLGLG+ E++
Sbjct: 1   MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
           TR AR+  +GNK+ LQL  +TG+LL+ EKLDRE +CG TEPCILHFQ+L+ENP++ FQ +
Sbjct: 61  TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L++ DINDH+P F EKEM+LKIPE++  GT FPL  A D D+GSN VQNY ISP+SHF V
Sbjct: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
             H   DGRKYPELVLDK LDREE P+L LTLTALDGG+PPRSGT  +RI V+D NDNAP
Sbjct: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAE 299
           EF Q  Y+VQ+PENSPL SLV  VSARDLD GA G ++Y LFQ  +++++   ++  T E
Sbjct: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           +RL++ +DFE    Y V I ATDGGGLSGKCT+ ++VVDVNDN P++TMS L+SP PEN+
Sbjct: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           PE VVAVFSVSDPDSG+NG+ I SIQ DLPFLLKP++KNFYTLVT+R LDRE++AEYNIT
Sbjct: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           +TVTDMGTPRLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQVTYSLLPPQ+PHL LASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLP 775
           SVGRCS+PEGPFPG LVDVSGTGTLSQSY YEVCLTG S   EFKFLKPIIPN  P
Sbjct: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776


>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
          Length = 798

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 595/796 (74%), Positives = 675/796 (84%), Gaps = 1/796 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME   A   +KRQV+   +LL L  AG+E+  YS+ EETE G  VANLA+DLGLGV EL+
Sbjct: 1   MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
           +R AR+    NK+ L LD+ TGNLLL EKLDR+ +CG+TEPC+LHFQ++LENP+QFF+ +
Sbjct: 61  SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L + DINDH+P F +KE+L+KI E T  G  F ++ AQD D+GSN++QNYTISPNSHF++
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
              +  D + YPELVLD+ALD E+  EL LTLTA+DGG+PP+SGTT + I VLD NDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
           EF QS YEVQVPE+ PL S +  +SA+DLDAG YG ++Y  F   E + + F I+  + E
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           + L+  LDFE    Y + I ATDGGGLSGKCT+ ++V+D+NDN PE+T+S+++   PENA
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
            ET+VA+FS+ D DSGDNGRMICSIQ++LPF LKPT KNF+TLV+++ LDRESQAEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           ITVTD+GTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQV YSLLPPQ+ HL LASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
           SVGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVCLTG SG  EFKFLKPIIPN      G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780

Query: 780 EEIGKTAAFRNSFGLN 795
             +G+   FRNSFGLN
Sbjct: 781 RNMGEIENFRNSFGLN 796


>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
          Length = 798

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 590/787 (74%), Positives = 667/787 (84%), Gaps = 1/787 (0%)

Query: 7   KTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARM 66
           + P++RQV+   +LL + +A  +   YS+ EETESG  VANL KDLGL +GELA RGAR+
Sbjct: 9   RVPKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARV 68

Query: 67  HYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDI 126
             KG K  LQ D +TG+LLL EKLDRE +CG TEPC+L FQ+LLENP+QFFQ +L++ D+
Sbjct: 69  VSKGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDV 128

Query: 127 NDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRG 186
           NDH+P F +KE+LLKIPES  PGT F ++ AQD D+G+N++QNYTISPN HFH+   +  
Sbjct: 129 NDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSL 188

Query: 187 DGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSF 246
           DG   P+LVL++ALDREE+PE+ LTLTALDGG+PPRSGT  +RI V+D NDN PEF +  
Sbjct: 189 DGIILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLL 248

Query: 247 YEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRA 305
           YEVQ+PE+SP+ S V +VSARDLD G  G ++YA  Q  E + + F +  K+ E+ L++ 
Sbjct: 249 YEVQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQK 308

Query: 306 LDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVA 365
           LDFE+   Y V I ATDGGGLSG C V ++V+D+NDN PELTMSTL +  PEN  +T++A
Sbjct: 309 LDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIA 368

Query: 366 VFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDM 425
           VFSVSDPDSGDNGRM+CSIQ+DLPF LKP+++NFYTLV    LDRE+++EYNITITVTD 
Sbjct: 369 VFSVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDF 428

Query: 426 GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 485
           GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV
Sbjct: 429 GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 488

Query: 486 TYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEAL 545
           TYSLLPPQ+PHL LASLVSINADNGHLFAL+SLDYEALQAFEFRVGA DRGSPALSSEAL
Sbjct: 489 TYSLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEAL 548

Query: 546 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 605
           VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL
Sbjct: 549 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 608

Query: 606 LKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 665
           LKATEPGLF +WAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGF
Sbjct: 609 LKATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGF 668

Query: 666 SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 725
           SQPYL LPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS
Sbjct: 669 SQPYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 728

Query: 726 VPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKT 785
           VPEGPFPG +VDVSGTGTLSQSY YEVCLTG SG  EFKFLKPIIPN + QGA       
Sbjct: 729 VPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEAN 788

Query: 786 AAFRNSF 792
            +FR SF
Sbjct: 789 PSFRKSF 795


>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
          Length = 795

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 589/794 (74%), Positives = 667/794 (84%), Gaps = 1/794 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME   A T Q RQV+   +LL + +AGSE   + + EE +SG  V NLAK LGL V EL+
Sbjct: 1   MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
           +RGAR+    NKE LQLD  TG+LLL E LDRE +CG+ EPC+L+FQ+L++NP QF Q +
Sbjct: 61  SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           LQ+ DINDH+P F EKEMLL+IPE++  G VF L+ A+D D+G N V++YTI+PNSHFHV
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
                 D RKYPELVLDKALD EERPELS  LTALDGG+PPRSGT  +R+VV+D NDN+P
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
           EF Q+FYEV++ ENS L SLVV VSA DLD+G    ++Y      E + + F I++K+ +
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           I L   LDFEA   Y++ I ATDGGGL GK TV I+V+DVNDNAPE+T+S+++SP PEN 
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           PETVV VF + D DSGDNG+M+CSI  D+PF+LK ++ N+YTL T+R LDRES+AEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           ITVTD+GTPRLKTEHNITVLVSDVNDNAPAFTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQV YSLLP Q+PHL LASLVSINADNGHLFALRSLDYEALQ F+FRVGATD GSPA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
            VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVC+TG S + +FKFLKPIIPN LPQ  G
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTG 780

Query: 780 EEIGKTAAFRNSFG 793
            E+ +   F+N+ G
Sbjct: 781 SEVEENPPFQNNLG 794


>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
          Length = 797

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 588/796 (73%), Positives = 668/796 (83%), Gaps = 1/796 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME    +T Q RQV+ L +LL + +AGSE   +S+ EE +SG  V NLAKDLGL V EL+
Sbjct: 1   MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
           +RGAR+     K+ LQLDI TG+LLL E LDRE +CG+ EPC+LH Q+L++NP QF Q +
Sbjct: 61  SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           LQ+ DINDH+P F EK+MLL+IPE++  G VF L+ A+D D+G N V++YTISPNSHFH+
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
                 D RKYPELVLDKALD EE PELS  L+ALDGG+PPRSGT  +R+VV+D NDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
           EF Q+FYEV++ ENS L SL+++VSA DLD+G  G + Y      E + + F I++K+ E
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           I L+  LDFE    Y++ I ATDGGGL GK TV I V+DVNDNAPE+T+S+++SP PEN 
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           PETVV VFS+ D DSGDNGR++CSI  DLPF+LK +++N+YTL T+R LDRES AEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           ITVTD+G PRLKTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQV YSLLPPQ+ HL LASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
           SVG CSVP+GPFPGHLVDVSGTGTLSQSY YEVCLTG S   EFKFLKP+IPN+  +G G
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780

Query: 780 EEIGKTAAFRNSFGLN 795
           +   + + FRNSFG N
Sbjct: 781 KNSEENSTFRNSFGFN 796


>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
          Length = 801

 Score = 1152 bits (2980), Expect = 0.0
 Identities = 587/788 (74%), Positives = 663/788 (84%), Gaps = 2/788 (0%)

Query: 10  QKRQVMFLAILLLLWEAGSEAVR-YSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68
           ++RQV+F  +LL L  AG+   R YS+ EETE    V NLAKDLGL   E + RG R+  
Sbjct: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69

Query: 69  KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128
           +GNK  LQL+ +T +LLL EKLDRE +CG TEPC+L FQ+LLE+P +FFQ +LQ+ DIND
Sbjct: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129

Query: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188
           H+P F +K+ML+K+ ES+ PGT FPLK A+D DIG N ++NY ISPNS+F V T  R DG
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189

Query: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248
           RKYPELVLD ALDREE  EL LTLTALDGG+PPRSGT  + I V+D NDNAPEF Q FY 
Sbjct: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249

Query: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIRLKRALD 307
           VQ+ E+SP++ LVV VSA D+D G  G ++Y+LFQ  DE+++ F +D  T EIRLK+ LD
Sbjct: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309

Query: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367
           FE    Y V I A D GG SGKCTV I+V+DVND+APE+TMS  +SP PENAPETVVA+F
Sbjct: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369

Query: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427
           SVSD DSG+NG++ CSIQ DLPFLLK ++ NFYTL+T+  LDRES+AEYN+TITVTD+GT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429

Query: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487
           PRL T  N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489

Query: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547
           SLLPPQ+PHL LASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSPALSSEALVR
Sbjct: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549

Query: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609

Query: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667
           ATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669

Query: 668 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 727
           PYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGRCSVP
Sbjct: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729

Query: 728 EGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAA 787
           EGPFPGHLVDV GTG+LSQ+Y YEVCL G SG  EF+FLKP++PN+     G E+ + + 
Sbjct: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSN 789

Query: 788 FRNSFGLN 795
           FRN FG +
Sbjct: 790 FRNGFGFS 797


>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
          Length = 793

 Score = 1146 bits (2965), Expect = 0.0
 Identities = 581/794 (73%), Positives = 663/794 (83%), Gaps = 3/794 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           ME  + +  QKRQV+FL + L +  AG+E +RY + EETE G  + NLAKDLGLGVGEL 
Sbjct: 1   MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
            RG R+    N ++L L   TG+LLL EKLDRE +CG  EPC+L FQLLLE P Q F+ +
Sbjct: 61  ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L + DINDHAP F ++E+ LKI EST PG  F L+ AQD D+G+N++ NYTISPN++FH+
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
             H+ G+G  YPELVL++ LDREE PE SLTLTALDGG+PPRSGT  +RI+VLD NDNAP
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYAL-FQGDEVTQPFVIDEKTAE 299
           +F++S Y+VQVPENSP+ S+VV VSARDLD G+ G +AYA  +  + + + F I+  +  
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           + LK  LD+EA   Y + I A DGGGLSGKCTV ++V D+NDN PEL +S+L+SP  EN+
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           PETVVAVF + D DSG+NG+ +CSIQ+D+PF+LKP+++NFYTLVT++ LDRE   EYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           ITVTD+GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQV YSLLP Q+PHL LASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYL LPEAAP   QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
            VGRCSVPEGPFP HLVD+SGTGTLSQSY YEVCLTG SG  EFKFLKPIIPNLLPQ  G
Sbjct: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778

Query: 780 EEIGKTAAFRNSFG 793
            E+ +   F+N+ G
Sbjct: 779 REVEENRPFQNNLG 792


>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
          Length = 798

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 586/788 (74%), Positives = 658/788 (83%), Gaps = 3/788 (0%)

Query: 10  QKRQVMFLAILLLLWEAGSEAVR-YSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68
           ++RQV+F  +LL L  AG+   R YS+ EETE    V NLAKDLGL   E + RG R+  
Sbjct: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69

Query: 69  KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128
           +GNK  LQL+ +T +LLL EKLDRE +CG TEPC+L FQ+LLE+P +FFQ +LQ+ DIND
Sbjct: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129

Query: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188
           H+P F +K+ML+K+ ES+ PGT FPLK A+D D+G N ++NY ISPNS+F V T  R DG
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189

Query: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248
           RKYPELVLDKALDREE  EL LTLTALDGG+PPRSGT  + I VLD NDNAPEF Q FY 
Sbjct: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249

Query: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIRLKRALD 307
           VQ+ E+SP+  LVV VSA D+D G  G ++Y+LFQ  +E+ + F I+  T EI LK+ LD
Sbjct: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309

Query: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367
           FE    Y V I A D G  SGKCTV I+V+DVND+APE+TMS  +SP PENAPETVVA+F
Sbjct: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369

Query: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427
           SVSD DSG+NG++ CSIQ DLPFLLK + +NFYTL+T+R LDRES+AEYNITITVTD+GT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428

Query: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487
           P L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488

Query: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547
           SLLPPQ+PHL L SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALSSEALVR
Sbjct: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548

Query: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608

Query: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667
           ATE GLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668

Query: 668 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 727
           PYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC VP
Sbjct: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728

Query: 728 EGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAA 787
           EGP PGHLVD+SGT TLSQSY YEVCL G SG  EFKFLKPIIPN  PQ  G+EI   + 
Sbjct: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNST 788

Query: 788 FRNSFGLN 795
           F N+FG N
Sbjct: 789 FPNNFGFN 796


>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
          Length = 797

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 580/796 (72%), Positives = 655/796 (82%), Gaps = 1/796 (0%)

Query: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
           M+T     P++RQV+FL +   +  AGS   RYS+ EETE G  V NLAKDLGL  GELA
Sbjct: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60

Query: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
            RG R+    NK+ L LD  TGNLL  EKLDRE +CG  EPC+L+FQ+L+++P Q ++ +
Sbjct: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120

Query: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
           L++ DINDH+P F  KEM+LKI E+T  GT F L+ AQD D G N++QNYTIS NS FH+
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180

Query: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
                 +G  YPELVLDKALDREE+ ELSLTLTALDGG+P RSGT+TIRIVVLD NDNAP
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240

Query: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
           +F Q+ YE Q PENSP+ SL+V VSA D D+G    V+Y+ F   E +   F I+  + E
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300

Query: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
           I L+  LD+E    Y + I A DGGGLS +CTV I+V+D NDN PEL +S+LS+   EN+
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360

Query: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
           P  V+AVF + D DSG+NG+ IC +Q++LPF LKP++ NFY L+T+  LDRES+AEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420

Query: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
           ITVTD+GTPRLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
           GTNAQVTYSLLPPQ+PHL LASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540

Query: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720

Query: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
           SVGRCSVPEGPFPGHLVDVSGTGTL QSY YEVCLTG S  GEFKFLKPI P+L P   G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780

Query: 780 EEIGKTAAFRNSFGLN 795
           +EI + +   NSFG N
Sbjct: 781 KEIEENSTLPNSFGFN 796


>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
          Length = 800

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 575/790 (72%), Positives = 650/790 (82%), Gaps = 3/790 (0%)

Query: 9   PQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68
           P++RQV+FL +   +  AGS   RYS+ EETE G  V NLAKDLGL  GELA RG R+  
Sbjct: 9   PRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68

Query: 69  KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128
             NK+ L LD  TGNLL  EKLDRE +CG  EPC+L+FQ+L+++P Q ++ +L++ DIND
Sbjct: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128

Query: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188
           HAP F +KE +LKI E+T  GT F L+ AQD D G N +QNYTISPNS FH+      +G
Sbjct: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188

Query: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248
             YPELVLDKALDREE+ ELSLTLTALDGG+P RSGT+T+RIVVLD NDNAP+F Q+ YE
Sbjct: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248

Query: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRALD 307
            Q PENSP+  L+V V A D+D+G    V+Y+ F   E +   F I+  + EI L+  LD
Sbjct: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308

Query: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367
           +E    Y + I A DGGGLS +C V +EV+D NDN PEL +S+ S+   EN+PET +AVF
Sbjct: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368

Query: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427
            ++D DSG+NG+M+C IQ +LPFLLKP+++NFY L+T+  LDRE +AEYNITITVTD+GT
Sbjct: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428

Query: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487
           PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488

Query: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547
           SLLPPQ+PHL LASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS EALVR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548

Query: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608

Query: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667
           ATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668

Query: 668 PYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 725
           PYLPLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS
Sbjct: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728

Query: 726 VPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKT 785
           VPEGPFPGHLVDV G  TLSQSY YEVCLTG  G  EFKFLKP+I ++  QG G +  + 
Sbjct: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788

Query: 786 AAFRNSFGLN 795
           + FRNSFG N
Sbjct: 789 STFRNSFGFN 798


>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
          Length = 818

 Score =  776 bits (2003), Expect = 0.0
 Identities = 405/780 (51%), Positives = 540/780 (69%), Gaps = 6/780 (0%)

Query: 7   KTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARM 66
           K+ Q RQV  L I L +    +  +RYS+ EE ESG  VAN+AKDLGL VG+LA RGAR+
Sbjct: 7   KSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARL 66

Query: 67  HYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDI 126
             +GNK   +L  KTG+L + EKLDRE +CG  +PC+LHF+++L  P+Q F+ ++++ DI
Sbjct: 67  VSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDI 126

Query: 127 NDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRG 186
           ND+AP F  KE LLKIPEST  G+ FPL+ AQD D+G N +QNYT+S N +FH+ T    
Sbjct: 127 NDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCS 186

Query: 187 DGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSF 246
            G KY ELVL+K LDREE+PE++LT+TA+DGG+PP+SGT  I +VVLD ND+ P+F +  
Sbjct: 187 HGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLV 246

Query: 247 YEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRA 305
           Y  QV ENSP  SLV  V+A DLD G   ++ Y+L Q  E + + F ID +  E+RL+  
Sbjct: 247 YRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGP 306

Query: 306 LDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP-ETVV 364
           LDFEA   Y+++I ATDGGGLS    V +EVVDVNDN PE+ +S++SSP PE++P +TVV
Sbjct: 307 LDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVV 366

Query: 365 AVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTD 424
           A+F++ D D    G++ C ++ DLPF++KPT  N Y+LVT R+LDRE  + YNITI   D
Sbjct: 367 ALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMD 426

Query: 425 MGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 484
            G P L  E  I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ
Sbjct: 427 TGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQ 486

Query: 485 VTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEA 544
           +TYSLLPP+N  L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G  +LSS+ 
Sbjct: 487 ITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQV 546

Query: 545 LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 604
            VRV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY 
Sbjct: 547 TVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYH 606

Query: 605 LLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDG 664
           LLKAT+ GLFS+   NGE+ T R +SERD    +L++LV+D+G+P  S T +L++LLVDG
Sbjct: 607 LLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDG 666

Query: 665 FSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASV 721
           FS+PYL   +      + +  T YLV++L  +S LFL SV++   + + ++ +     ++
Sbjct: 667 FSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTI 726

Query: 722 GRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNL-LPQGAGE 780
                 +  F  +LV   G G+LS+   YE+C    +G  EF+FLK  +PN   P   GE
Sbjct: 727 QEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGE 786


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  647 bits (1668), Expect = 0.0
 Identities = 368/786 (46%), Positives = 494/786 (62%), Gaps = 15/786 (1%)

Query: 13  QVMFLAILL-LLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGN 71
           ++M L + L LL EAG+  + YS+PEET+ G  V N+AKDLGL   ELA  G R+  +G 
Sbjct: 12  RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71

Query: 72  KELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAP 131
             L  L+ ++G+L+   ++DRE +C  + PC++ F +L+E+ ++ F  ++++ DIND+ P
Sbjct: 72  MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131

Query: 132 EFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKY 191
           +F  +E+  K+ E T PGT   L   QD D+G N++Q+Y +S N HF +      DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191

Query: 192 PELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQV 251
           PE+VL   LDREE     L LTA DGG P RSGT  I I V+D NDN P F Q+ Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251

Query: 252 PENSPLNSLVVVVSARDLDAGAYGSVAYALFQGD-EVTQPFVIDEKTAEIRLKRALDFEA 310
           PEN PL + +++V+A D D GA G V Y+    D  V Q F +D  T EI  K  LDFE 
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311

Query: 311 TPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPEN-APETVVAVFSV 369
              Y++E+ A DG GL  K  V I+V+DVNDNAPE+T++++++  PEN  P T++A+ SV
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371

Query: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
            D DSGDNG   C I  +LPF L+  + N+Y LVT+RTLDRE  + YNITIT  D GTP 
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431

Query: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
           L TE +I++LV+D+NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491

Query: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
           +        L++ +SIN+D G L+ALRS DYE  +  + +V A D G P LSS   + + 
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551

Query: 550 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 608
           +LD NDN+P +LYP L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 609 TEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 668
           +EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S  
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671

Query: 669 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVG 722
              L    P+    DS LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731

Query: 723 RCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP-IIPNLLPQGAGEE 781
             S+P      H V V G     Q+Y +EV LT DS      F +P     L+ Q + E+
Sbjct: 732 LASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787

Query: 782 IGKTAA 787
            G  +A
Sbjct: 788 KGFLSA 793


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  647 bits (1668), Expect = 0.0
 Identities = 368/786 (46%), Positives = 494/786 (62%), Gaps = 15/786 (1%)

Query: 13  QVMFLAILL-LLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGN 71
           ++M L + L LL EAG+  + YS+PEET+ G  V N+AKDLGL   ELA  G R+  +G 
Sbjct: 12  RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71

Query: 72  KELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAP 131
             L  L+ ++G+L+   ++DRE +C  + PC++ F +L+E+ ++ F  ++++ DIND+ P
Sbjct: 72  MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131

Query: 132 EFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKY 191
           +F  +E+  K+ E T PGT   L   QD D+G N++Q+Y +S N HF +      DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191

Query: 192 PELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQV 251
           PE+VL   LDREE     L LTA DGG P RSGT  I I V+D NDN P F Q+ Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251

Query: 252 PENSPLNSLVVVVSARDLDAGAYGSVAYALFQGD-EVTQPFVIDEKTAEIRLKRALDFEA 310
           PEN PL + +++V+A D D GA G V Y+    D  V Q F +D  T EI  K  LDFE 
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311

Query: 311 TPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPEN-APETVVAVFSV 369
              Y++E+ A DG GL  K  V I+V+DVNDNAPE+T++++++  PEN  P T++A+ SV
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371

Query: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
            D DSGDNG   C I  +LPF L+  + N+Y LVT+RTLDRE  + YNITIT  D GTP 
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431

Query: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
           L TE +I++LV+D+NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491

Query: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
           +        L++ +SIN+D G L+ALRS DYE  +  + +V A D G P LSS   + + 
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551

Query: 550 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 608
           +LD NDN+P +LYP L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 609 TEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 668
           +EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S  
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671

Query: 669 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVG 722
              L    P+    DS LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731

Query: 723 RCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP-IIPNLLPQGAGEE 781
             S+P      H V V G     Q+Y +EV LT DS      F +P     L+ Q + E+
Sbjct: 732 LASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787

Query: 782 IGKTAA 787
            G  +A
Sbjct: 788 KGFLSA 793


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  644 bits (1662), Expect = 0.0
 Identities = 357/766 (46%), Positives = 487/766 (63%), Gaps = 13/766 (1%)

Query: 12  RQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGN 71
           R V+  ++L +LWEA +  +RYS+PEETE GY V N++KDL L   ELA R  R+  +G 
Sbjct: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71

Query: 72  KELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAP 131
            +L  L+ ++G L+   ++DRE +C  +  C+++F++L+E+ V+ +  ++++TDIND AP
Sbjct: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131

Query: 132 EFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKY 191
           +F  + + +KI E   PG  +PL  A D D+G N++Q+Y +SPN HF +      +G   
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191

Query: 192 PELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQV 251
           PELVL++ALDREE     L LTA DGG P RS T  I + VLD NDNAP F Q  Y V+V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251

Query: 252 PENSPLNSLVVVVSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAEIRLKRALDFEA 310
            EN P  + ++  +A DLD G  G VAY  ++  ++ +  F ++E T EI   ++LD+E 
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311

Query: 311 TPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPE-TVVAVFSV 369
             +Y +EI A DGGGL G   V I V DVNDN PE+T+++L SP  E+AP+ TV+ +F+ 
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371

Query: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
            D DSG NG+++CSIQ +L F L+ + +++Y L+T + LDRE  +EYNIT+T TD GTP 
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431

Query: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
           L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+    I SV A D DS  N++V YSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491

Query: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
                    L++ VSIN+D G L+AL S DYE  +  + +V A+D GSP LSS   +R+ 
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551

Query: 550 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 608
           VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611

Query: 609 TEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 668
           +EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D     
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671

Query: 669 YLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAASVG 722
              L     PA  +A  LT+YLVVA+A VS +FL  V+  +A+RL         RA S G
Sbjct: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731

Query: 723 RCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
              VP      H V V G     Q+Y  E  LT DS      F +P
Sbjct: 732 LAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score =  644 bits (1662), Expect = 0.0
 Identities = 357/766 (46%), Positives = 487/766 (63%), Gaps = 13/766 (1%)

Query: 12  RQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGN 71
           R V+  ++L +LWEA +  +RYS+PEETE GY V N++KDL L   ELA R  R+  +G 
Sbjct: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71

Query: 72  KELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAP 131
            +L  L+ ++G L+   ++DRE +C  +  C+++F++L+E+ V+ +  ++++TDIND AP
Sbjct: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131

Query: 132 EFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKY 191
           +F  + + +KI E   PG  +PL  A D D+G N++Q+Y +SPN HF +      +G   
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191

Query: 192 PELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQV 251
           PELVL++ALDREE     L LTA DGG P RS T  I + VLD NDNAP F Q  Y V+V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251

Query: 252 PENSPLNSLVVVVSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAEIRLKRALDFEA 310
            EN P  + ++  +A DLD G  G VAY  ++  ++ +  F ++E T EI   ++LD+E 
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311

Query: 311 TPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPE-TVVAVFSV 369
             +Y +EI A DGGGL G   V I V DVNDN PE+T+++L SP  E+AP+ TV+ +F+ 
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371

Query: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
            D DSG NG+++CSIQ +L F L+ + +++Y L+T + LDRE  +EYNIT+T TD GTP 
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431

Query: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
           L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+    I SV A D DS  N++V YSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491

Query: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
                    L++ VSIN+D G L+AL S DYE  +  + +V A+D GSP LSS   +R+ 
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551

Query: 550 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 608
           VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611

Query: 609 TEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 668
           +EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D     
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671

Query: 669 YLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAASVG 722
              L     PA  +A  LT+YLVVA+A VS +FL  V+  +A+RL         RA S G
Sbjct: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731

Query: 723 RCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
              VP      H V V G     Q+Y  E  LT DS      F +P
Sbjct: 732 LAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  641 bits (1654), Expect = 0.0
 Identities = 357/768 (46%), Positives = 484/768 (63%), Gaps = 8/768 (1%)

Query: 14  VMFLAILL-LLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNK 72
           ++ L ILL  LWE G   +RYS+PEE E G  V ++++DLGL   ELA RG R+  +G  
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  ELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPE 132
           +L  L+ ++G+L+   ++DRE +C     C L+  +L+E+ V+ +  ++++ DIND+AP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYP 192
           F E E+ +KI E+      FPL  A D DIG N++Q+Y +SPN+HF +   N  DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVP 252
           ELVL +ALDREE+    L LTA DGG P R+GT  IR++VLD NDNAP F Q  Y   VP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENSPLNSLVVVVSARDLDAGAYGSVAYAL-FQGDEVTQPFVIDEKTAEIRLKRALDFEAT 311
           EN  L + ++VV+A D D G    V Y+  +  D+  Q F +D  +  I     LD E +
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 312 PYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPE-TVVAVFSVS 370
            +Y +E+ A D  G S +  V I V+DVNDNAPE+ +++L+S  PEN+P  T++A+ +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 371 DPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRL 430
           D DS +NG++IC IQ +LPF L+ +  N+Y+LVT   LDRE    YNIT+T TD GTP L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 431 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
            TE +I++ V+D NDN P F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL 
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 491 PPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 550
                   L+S VSIN+D G L+AL S DYE  +  + +V A D G P LSS   + + V
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 551 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
           EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q  
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 670 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSV 726
             L    +PA ++   LT+YLVVA+A+VS +FL  V+L +A+RL R  +SR        +
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 727 PEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLL 774
              P   H V V G     Q+Y +EV LT DS      F +P   ++L
Sbjct: 733 TGAP-ASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADML 779


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  641 bits (1654), Expect = 0.0
 Identities = 357/768 (46%), Positives = 484/768 (63%), Gaps = 8/768 (1%)

Query: 14  VMFLAILL-LLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNK 72
           ++ L ILL  LWE G   +RYS+PEE E G  V ++++DLGL   ELA RG R+  +G  
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  ELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPE 132
           +L  L+ ++G+L+   ++DRE +C     C L+  +L+E+ V+ +  ++++ DIND+AP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYP 192
           F E E+ +KI E+      FPL  A D DIG N++Q+Y +SPN+HF +   N  DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVP 252
           ELVL +ALDREE+    L LTA DGG P R+GT  IR++VLD NDNAP F Q  Y   VP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENSPLNSLVVVVSARDLDAGAYGSVAYAL-FQGDEVTQPFVIDEKTAEIRLKRALDFEAT 311
           EN  L + ++VV+A D D G    V Y+  +  D+  Q F +D  +  I     LD E +
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 312 PYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPE-TVVAVFSVS 370
            +Y +E+ A D  G S +  V I V+DVNDNAPE+ +++L+S  PEN+P  T++A+ +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 371 DPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRL 430
           D DS +NG++IC IQ +LPF L+ +  N+Y+LVT   LDRE    YNIT+T TD GTP L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 431 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
            TE +I++ V+D NDN P F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL 
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 491 PPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 550
                   L+S VSIN+D G L+AL S DYE  +  + +V A D G P LSS   + + V
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 551 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
           EPGLFS+  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q  
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 670 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSV 726
             L    +PA ++   LT+YLVVA+A+VS +FL  V+L +A+RL R  +SR        +
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 727 PEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLL 774
              P   H V V G     Q+Y +EV LT DS      F +P   ++L
Sbjct: 733 TGAP-ASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADML 779


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score =  635 bits (1638), Expect = 0.0
 Identities = 352/753 (46%), Positives = 476/753 (63%), Gaps = 11/753 (1%)

Query: 24  WEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNKELLQLDIKTGN 83
           WEAG+  + YSIPEE E G  V N++KDLGL   ELA RG R+  +G  +L  L+ ++G+
Sbjct: 28  WEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGS 87

Query: 84  LLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPEFPEKEMLLKIP 143
           L+   ++DRE +C  +  C++ F +L+E+ V+ F  ++++TDIND+AP+F  + + +KI 
Sbjct: 88  LITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKIN 147

Query: 144 ESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYPELVLDKALDRE 203
           E+   G  FPL  A D D+G N++Q+Y +SPN HF +   +R +G KYPELVL+ +LDRE
Sbjct: 148 ENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDRE 207

Query: 204 ERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPENSPLNSLVVV 263
           E     L LTA DGG P RSGT  + + V D NDNAP F    Y V VPEN P+ + ++ 
Sbjct: 208 EEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLT 267

Query: 264 VSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAEIRLKRALDFEATPYYNVEIVATD 322
           V+A D D GA G V Y+  +  D     F +++ T EI++   LD+E T +Y +EI A D
Sbjct: 268 VTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAED 327

Query: 323 GGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP-ETVVAVFSVSDPDSGDNGRMI 381
           GG       V I V DVNDN+PELT+++L SP  E++P  TVVA+ +V D DS  NG++ 
Sbjct: 328 GGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVT 387

Query: 382 CSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVS 441
           CSI   LPF L+ ++ ++Y LV  R LDRE  + YNIT+T TD G+P L TE +  + V+
Sbjct: 388 CSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVA 447

Query: 442 DVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQNPHLRLAS 501
           D+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL       + L+S
Sbjct: 448 DINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSS 507

Query: 502 LVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVL 561
            +SIN+D G L+ALRS DYE     + +V A+D G P LSS   + + VLD NDN+P +L
Sbjct: 508 YISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEIL 567

Query: 562 YP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSMWAHN 620
           YP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF++  H 
Sbjct: 568 YPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHT 627

Query: 621 GEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQ 679
           GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L    +PA 
Sbjct: 628 GEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPAN 687

Query: 680 AQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCSVPEGPFPGHL 735
           ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G  +   G    H 
Sbjct: 688 SETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHF 744

Query: 736 VDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
           V V G     Q+Y +EV LT DS      F +P
Sbjct: 745 VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score =  635 bits (1638), Expect = 0.0
 Identities = 352/753 (46%), Positives = 476/753 (63%), Gaps = 11/753 (1%)

Query: 24  WEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNKELLQLDIKTGN 83
           WEAG+  + YSIPEE E G  V N++KDLGL   ELA RG R+  +G  +L  L+ ++G+
Sbjct: 28  WEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGS 87

Query: 84  LLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPEFPEKEMLLKIP 143
           L+   ++DRE +C  +  C++ F +L+E+ V+ F  ++++TDIND+AP+F  + + +KI 
Sbjct: 88  LITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKIN 147

Query: 144 ESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYPELVLDKALDRE 203
           E+   G  FPL  A D D+G N++Q+Y +SPN HF +   +R +G KYPELVL+ +LDRE
Sbjct: 148 ENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDRE 207

Query: 204 ERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPENSPLNSLVVV 263
           E     L LTA DGG P RSGT  + + V D NDNAP F    Y V VPEN P+ + ++ 
Sbjct: 208 EEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLT 267

Query: 264 VSARDLDAGAYGSVAYALFQ-GDEVTQPFVIDEKTAEIRLKRALDFEATPYYNVEIVATD 322
           V+A D D GA G V Y+  +  D     F +++ T EI++   LD+E T +Y +EI A D
Sbjct: 268 VTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAED 327

Query: 323 GGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP-ETVVAVFSVSDPDSGDNGRMI 381
           GG       V I V DVNDN+PELT+++L SP  E++P  TVVA+ +V D DS  NG++ 
Sbjct: 328 GGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVT 387

Query: 382 CSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVS 441
           CSI   LPF L+ ++ ++Y LV  R LDRE  + YNIT+T TD G+P L TE +  + V+
Sbjct: 388 CSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVA 447

Query: 442 DVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQNPHLRLAS 501
           D+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL       + L+S
Sbjct: 448 DINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSS 507

Query: 502 LVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVL 561
            +SIN+D G L+ALRS DYE     + +V A+D G P LSS   + + VLD NDN+P +L
Sbjct: 508 YISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEIL 567

Query: 562 YP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSMWAHN 620
           YP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF++  H 
Sbjct: 568 YPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHT 627

Query: 621 GEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQ 679
           GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L    +PA 
Sbjct: 628 GEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPAN 687

Query: 680 AQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCSVPEGPFPGHL 735
           ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G  +   G    H 
Sbjct: 688 SETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHF 744

Query: 736 VDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
           V V G     Q+Y +EV LT DS      F +P
Sbjct: 745 VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  634 bits (1635), Expect = 0.0
 Identities = 352/772 (45%), Positives = 481/772 (62%), Gaps = 8/772 (1%)

Query: 4   ALAKTPQKRQVMFLAILLL-LWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATR 62
           AL K P  R+++ L  LL  LWEA +  +RYS+ EE + G  V N+AKDLGL    LA +
Sbjct: 3   ALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQ 62

Query: 63  GARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQ 122
           G R+  +G  +L  L+ ++G+L+   ++DRE +C  + PC+L+F +LLE+ +  +  +++
Sbjct: 63  GVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVE 122

Query: 123 LTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVAT 182
           +TDIND+AP F  +E+ LKI E+T PG   PLK A D D+G N +Q Y ++PN HF +  
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDV 182

Query: 183 HNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEF 242
               DG KYPELVL+++LDREE     L L A DGG P  SGT+ I + VLD NDNAP F
Sbjct: 183 RRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVF 242

Query: 243 LQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIR 301
            Q  Y + +PEN+ + + ++ V+A D D G Y  V Y L +   E ++ F +   + E+ 
Sbjct: 243 TQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELT 302

Query: 302 LKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTM-STLSSPTPENAP 360
           + + LD+E   ++ ++I A DG GL  +  V + V+DVNDNAPE  M S  SS + ++ P
Sbjct: 303 IIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLP 362

Query: 361 ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI 420
            T++ +F+V D DSG N    CS+  DLPF L+ ++ N+Y LVT R LDRE  + YNIT+
Sbjct: 363 GTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITL 422

Query: 421 TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 480
           T  D G P L T+ +I + V+D+NDNAPAF++TSY+ ++ ENN     + SV+A D DS 
Sbjct: 423 TAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSN 482

Query: 481 TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL 540
            NA VTYS          L+S +SIN+D G L+ALRS DYE L+  +  V A D G+P L
Sbjct: 483 DNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPL 542

Query: 541 SSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           SS   + + VLD NDN+P +LYP      +   EL PR+AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSY LLKA+EPGLFS+  H GEVRTAR L +RDA K  LVV ++D+G+PP SAT TL V
Sbjct: 603 WLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTV 662

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RS 716
            + D        L    P+    DS LT+YLVVA+A+VS +FL  V++ +A RL R  +S
Sbjct: 663 AVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 722

Query: 717 RAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
           R       S+  G    H V V G     Q+Y +EV LT DS      F +P
Sbjct: 723 RLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  634 bits (1635), Expect = 0.0
 Identities = 352/772 (45%), Positives = 481/772 (62%), Gaps = 8/772 (1%)

Query: 4   ALAKTPQKRQVMFLAILLL-LWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATR 62
           AL K P  R+++ L  LL  LWEA +  +RYS+ EE + G  V N+AKDLGL    LA +
Sbjct: 3   ALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQ 62

Query: 63  GARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQ 122
           G R+  +G  +L  L+ ++G+L+   ++DRE +C  + PC+L+F +LLE+ +  +  +++
Sbjct: 63  GVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVE 122

Query: 123 LTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVAT 182
           +TDIND+AP F  +E+ LKI E+T PG   PLK A D D+G N +Q Y ++PN HF +  
Sbjct: 123 ITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDV 182

Query: 183 HNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEF 242
               DG KYPELVL+++LDREE     L L A DGG P  SGT+ I + VLD NDNAP F
Sbjct: 183 RRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVF 242

Query: 243 LQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIR 301
            Q  Y + +PEN+ + + ++ V+A D D G Y  V Y L +   E ++ F +   + E+ 
Sbjct: 243 TQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELT 302

Query: 302 LKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTM-STLSSPTPENAP 360
           + + LD+E   ++ ++I A DG GL  +  V + V+DVNDNAPE  M S  SS + ++ P
Sbjct: 303 IIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLP 362

Query: 361 ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI 420
            T++ +F+V D DSG N    CS+  DLPF L+ ++ N+Y LVT R LDRE  + YNIT+
Sbjct: 363 GTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITL 422

Query: 421 TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 480
           T  D G P L T+ +I + V+D+NDNAPAF++TSY+ ++ ENN     + SV+A D DS 
Sbjct: 423 TAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSN 482

Query: 481 TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL 540
            NA VTYS          L+S +SIN+D G L+ALRS DYE L+  +  V A D G+P L
Sbjct: 483 DNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPL 542

Query: 541 SSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
           SS   + + VLD NDN+P +LYP      +   EL PR+AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602

Query: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
           WLSY LLKA+EPGLFS+  H GEVRTAR L +RDA K  LVV ++D+G+PP SAT TL V
Sbjct: 603 WLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTV 662

Query: 660 LLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RS 716
            + D        L    P+    DS LT+YLVVA+A+VS +FL  V++ +A RL R  +S
Sbjct: 663 AVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 722

Query: 717 RAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
           R       S+  G    H V V G     Q+Y +EV LT DS      F +P
Sbjct: 723 RLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  631 bits (1628), Expect = 0.0
 Identities = 362/770 (47%), Positives = 478/770 (62%), Gaps = 29/770 (3%)

Query: 10  QKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYK 69
           ++  V+FL +L L   A  E +RY IPEE   G  V NLA DLG  V EL TR  R+   
Sbjct: 12  ERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--S 69

Query: 70  GNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDH 129
             K    +  ++G LL+  +LDRE +CG    C L F+ + ENP+ F+  ++++ DINDH
Sbjct: 70  SEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDH 129

Query: 130 APEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGR 189
            P+F +    L+I ES QPGT F L++A+D DIG N++Q Y +S N  F +    + DG 
Sbjct: 130 TPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGS 189

Query: 190 KYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEV 249
           KYPEL L+K LDRE++    L LTALDGG PP SGTT +RI V D NDN P F +  Y V
Sbjct: 190 KYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRV 249

Query: 250 QVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEIRLKRALDFE 309
            + EN P  + V+ VSA D D G    + Y+ ++  ++   F ++ K+ EI  ++ LDFE
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQI---FSLNSKSGEITTQKKLDFE 306

Query: 310 ATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA-PETVVAVFS 368
            T  Y++ +   DGGGL  +CTV I + D NDN+PE+T  +L     ENA P T++A+  
Sbjct: 307 ETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIK 366

Query: 369 VSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTP 428
           + D DSG+NG + C +Q ++PF +  + KN Y LVT  TLDRE   EYN+TIT TD G P
Sbjct: 367 IHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKP 426

Query: 429 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 488
            L +  ++ + + DVNDNAP F Q SY + V ENN P   I  V A+D D G N QV+YS
Sbjct: 427 PLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYS 486

Query: 489 LLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 548
           ++      L LAS VS++A +G +FA R+ DYE L+ FE  + A D+GSPALS+   +RV
Sbjct: 487 IMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRV 546

Query: 549 LVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 606
           LV D NDN+P VLYP    +GSA   ++VPRAAEPGYLVTKVVAVD DSG NAWLSY +L
Sbjct: 547 LVGDRNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 605

Query: 607 KATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 666
           +A+EPGLFS+    GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++  D   
Sbjct: 606 QASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSL- 664

Query: 667 QPYLP--LPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 724
           Q  LP       P+  QA+ L  YLVVALA +S LFL +V+L VA+RL RRS + +   C
Sbjct: 665 QEVLPDITDRPVPSDPQAE-LQFYLVVALALISVLFLLAVILAVALRL-RRSSSPAAWSC 722

Query: 725 SVP-----EGPF--PGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLK 767
             P      GP   P +       GTL  SY+  V  TG +   EF FLK
Sbjct: 723 FQPGLCVKSGPVVPPNY-----SQGTLPYSYNLCVAHTGKT---EFNFLK 764


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  631 bits (1628), Expect = 0.0
 Identities = 362/770 (47%), Positives = 478/770 (62%), Gaps = 29/770 (3%)

Query: 10  QKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYK 69
           ++  V+FL +L L   A  E +RY IPEE   G  V NLA DLG  V EL TR  R+   
Sbjct: 12  ERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--S 69

Query: 70  GNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDH 129
             K    +  ++G LL+  +LDRE +CG    C L F+ + ENP+ F+  ++++ DINDH
Sbjct: 70  SEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDH 129

Query: 130 APEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGR 189
            P+F +    L+I ES QPGT F L++A+D DIG N++Q Y +S N  F +    + DG 
Sbjct: 130 TPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGS 189

Query: 190 KYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEV 249
           KYPEL L+K LDRE++    L LTALDGG PP SGTT +RI V D NDN P F +  Y V
Sbjct: 190 KYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRV 249

Query: 250 QVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEIRLKRALDFE 309
            + EN P  + V+ VSA D D G    + Y+ ++  ++   F ++ K+ EI  ++ LDFE
Sbjct: 250 SLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQI---FSLNSKSGEITTQKKLDFE 306

Query: 310 ATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA-PETVVAVFS 368
            T  Y++ +   DGGGL  +CTV I + D NDN+PE+T  +L     ENA P T++A+  
Sbjct: 307 ETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIK 366

Query: 369 VSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTP 428
           + D DSG+NG + C +Q ++PF +  + KN Y LVT  TLDRE   EYN+TIT TD G P
Sbjct: 367 IHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKP 426

Query: 429 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 488
            L +  ++ + + DVNDNAP F Q SY + V ENN P   I  V A+D D G N QV+YS
Sbjct: 427 PLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYS 486

Query: 489 LLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 548
           ++      L LAS VS++A +G +FA R+ DYE L+ FE  + A D+GSPALS+   +RV
Sbjct: 487 IMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRV 546

Query: 549 LVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 606
           LV D NDN+P VLYP    +GSA   ++VPRAAEPGYLVTKVVAVD DSG NAWLSY +L
Sbjct: 547 LVGDRNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 605

Query: 607 KATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 666
           +A+EPGLFS+    GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++  D   
Sbjct: 606 QASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSL- 664

Query: 667 QPYLP--LPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 724
           Q  LP       P+  QA+ L  YLVVALA +S LFL +V+L VA+RL RRS + +   C
Sbjct: 665 QEVLPDITDRPVPSDPQAE-LQFYLVVALALISVLFLLAVILAVALRL-RRSSSPAAWSC 722

Query: 725 SVP-----EGPF--PGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLK 767
             P      GP   P +       GTL  SY+  V  TG +   EF FLK
Sbjct: 723 FQPGLCVKSGPVVPPNY-----SQGTLPYSYNLCVAHTGKT---EFNFLK 764


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score =  630 bits (1626), Expect = e-180
 Identities = 352/762 (46%), Positives = 488/762 (64%), Gaps = 9/762 (1%)

Query: 15  MFLAILLL--LWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNK 72
           + L  +LL  L E GS  +RYS+PEE + G  V N+AKDLGL   ELA RG R+  +G  
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  ELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPE 132
           +L  L+ ++G+L+   ++DRE +C  +  C+++F +L+EN ++ +  ++++ DIND+ P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYP 192
           F ++E+ +K+ E+   GT   L  A+D D+G N++++Y +S N HF +   +  DG+KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVP 252
           ELVL++ LDRE+     L LTALDGG P  SGTT IR+ VLD NDNAP F  S Y V VP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRALDFEAT 311
           EN P+ + +++++A D D G  G + Y+    +E +++ F +D    EI   ++LD+E +
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 312 PYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA-PETVVAVFSVS 370
            +Y +E+VA DGG L     V + V DVNDNAPE+ +++L+S   E+  P TV+A+FSV 
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 371 DPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRL 430
           D DSG+NG + CSI  +LPF L+ ++ N+Y L+T R LDRE  ++YNIT+TV D GTP L
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 431 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
            TE +I + V+DVNDN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL 
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 491 PPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 550
                   L+S VSIN+D G L+ALRS DYE L+  +  V A+D G+P LSS   + + V
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 551 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
           EPGLF++  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT T+ V + D      
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 670 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSV 726
             L     P   +   LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 727 PEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
              P   H V V G     Q+Y +EV LT DS      F +P
Sbjct: 733 AGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  630 bits (1626), Expect = e-180
 Identities = 352/762 (46%), Positives = 488/762 (64%), Gaps = 9/762 (1%)

Query: 15  MFLAILLL--LWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNK 72
           + L  +LL  L E GS  +RYS+PEE + G  V N+AKDLGL   ELA RG R+  +G  
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  ELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDHAPE 132
           +L  L+ ++G+L+   ++DRE +C  +  C+++F +L+EN ++ +  ++++ DIND+ P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYP 192
           F ++E+ +K+ E+   GT   L  A+D D+G N++++Y +S N HF +   +  DG+KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVP 252
           ELVL++ LDRE+     L LTALDGG P  SGTT IR+ VLD NDNAP F  S Y V VP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRALDFEAT 311
           EN P+ + +++++A D D G  G + Y+    +E +++ F +D    EI   ++LD+E +
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 312 PYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA-PETVVAVFSVS 370
            +Y +E+VA DGG L     V + V DVNDNAPE+ +++L+S   E+  P TV+A+FSV 
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 371 DPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPRL 430
           D DSG+NG + CSI  +LPF L+ ++ N+Y L+T R LDRE  ++YNIT+TV D GTP L
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 431 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
            TE +I + V+DVNDN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL 
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 491 PPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLV 550
                   L+S VSIN+D G L+ALRS DYE L+  +  V A+D G+P LSS   + + V
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 551 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
           EPGLF++  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT T+ V + D      
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 670 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSV 726
             L     P   +   LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 727 PEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKP 768
              P   H V V G     Q+Y +EV LT DS      F +P
Sbjct: 733 AGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,878,026
Number of Sequences: 37866
Number of extensions: 1444340
Number of successful extensions: 10604
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3262
Number of HSP's gapped (non-prelim): 659
length of query: 795
length of database: 18,247,518
effective HSP length: 110
effective length of query: 685
effective length of database: 14,082,258
effective search space: 9646346730
effective search space used: 9646346730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.