Guide to the Human Genome
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Name: SRPX2 Sequence: fasta or formatted (465aa) NCBI GI: 7657619
Description:

sushi-repeat-containing protein, X-linked 2

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         23           2
 C cysteine            4.7         22           1
 D aspartate           5.6         26           2
 E glutamate           6.0         28           2
 F phenylalanine       2.6         12           2
 G glycine             7.1         33           2
 H histidine           1.9          9           1
 I isoleucine          5.2         24           2
 K lysine              2.6         12           1
 L leucine             7.5         35           2
 M methionine          1.9          9           1
 N asparagine          2.8         13           1
 P proline             6.9         32           2
 Q glutamine           5.6         26           2
 R arginine            9.0         42           2
 S serine              7.5         35           2
 T threonine           6.0         28           1
 V valine              4.9         23           1
 W tryptophan          1.3          6           1
 Y tyrosine            5.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sushi-repeat-containing protein, X-linked 2 
SRPX                  0.433   sushi-repeat-containing protein, X-linked 
SELP                  0.071   selectin P precursor 
SELE                  0.067   selectin E precursor 
SVEP1                 0.065   polydom 
CSMD1                 0.054   CUB and Sushi multiple domains 1 
CR2                   0.051   complement component (3d/Epstein Barr virus) recepto...
PAPPA                 0.051   pregnancy-associated plasma protein A preproprotein ...
CSMD2                 0.050   CUB and Sushi multiple domains 2 
CR2                   0.050   complement component (3d/Epstein Barr virus) recepto...
CCDC80                0.047   steroid-sensitive protein 1 
CCDC80                0.047   steroid-sensitive protein 1 
CSMD3                 0.045   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.045   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.045   CUB and Sushi multiple domains 3 isoform 1 
SELL                  0.038   selectin L precursor 
C4BPB                 0.034   complement component 4 binding protein, beta chain i...
C4BPB                 0.034   complement component 4 binding protein, beta chain i...
C4BPB                 0.034   complement component 4 binding protein, beta chain i...
C4BPB                 0.034   complement component 4 binding protein, beta chain i...
C4BPB                 0.034   complement component 4 binding protein, beta chain is...
CR1                   0.034   complement receptor 1 isoform S precursor 
CR1                   0.034   complement receptor 1 isoform F precursor 
CFB                   0.033   complement factor B preproprotein 
C2                    0.032   complement component 2 isoform 1 preproprotein [Homo...
APOH                  0.031   apolipoprotein H precursor 
CR1L                  0.030   complement component (3b/4b) receptor 1-like 
CD55                  0.028   decay accelerating factor for complement isoform 2 ...
CD55                  0.028   decay accelerating factor for complement isoform 1 p...
CD46                  0.027   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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