Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 75709208
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo
sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens] 739 0.0
gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens] 649 0.0
gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens] 647 0.0
gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens] 643 0.0
gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens] 90 4e-18
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo... 81 1e-15
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 81 1e-15
gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 46 6e-05
gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 46 6e-05
gi|38505292 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|38505276 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|38505274 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|38505272 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|38505268 voltage-dependent calcium channel alpha 1G subunit i... 32 1.2
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 31 1.6
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 31 1.6
gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3 c... 31 2.0
gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3 c... 31 2.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 31 2.0
gi|15147337 ubiquitin protein ligase E3 component n-recognin 5 [... 31 2.0
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|38505284 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|38505282 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|38505280 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|38505278 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|38505270 voltage-dependent calcium channel alpha 1G subunit i... 30 2.7
gi|8922438 cell division cycle associated 8 [Homo sapiens] 30 3.5
gi|188219593 TIA1 protein isoform 1 [Homo sapiens] 30 3.5
gi|188219591 TIA1 protein isoform 2 [Homo sapiens] 30 3.5
>gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]
Length = 370
Score = 739 bits (1907), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MARPGLIHSAPGLPDTCALLQPPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGN 60
MARPGLIHSAPGLPDTCALLQPPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGN
Sbjct: 1 MARPGLIHSAPGLPDTCALLQPPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGN 60
Query: 61 VHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITY 120
VHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITY
Sbjct: 61 VHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITY 120
Query: 121 TSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEG 180
TSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEG
Sbjct: 121 TSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEG 180
Query: 181 RKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVT 240
RKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVT
Sbjct: 181 RKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVT 240
Query: 241 MKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLV 300
MKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLV
Sbjct: 241 MKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLV 300
Query: 301 DADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKA 360
DADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKA
Sbjct: 301 DADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKA 360
Query: 361 KRQGHAEPQP 370
KRQGHAEPQP
Sbjct: 361 KRQGHAEPQP 370
>gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
Length = 329
Score = 649 bits (1673), Expect = 0.0
Identities = 325/328 (99%), Positives = 326/328 (99%)
Query: 43 AIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF 102
A Q+ RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF
Sbjct: 2 AFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF 61
Query: 103 LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK 162
LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK
Sbjct: 62 LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK 121
Query: 163 VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH 222
VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH
Sbjct: 122 VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH 181
Query: 223 LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI 282
LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI
Sbjct: 182 LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI 241
Query: 283 SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE 342
SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE
Sbjct: 242 SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE 301
Query: 343 DEKKRFEEGKGRYLQMKAKRQGHAEPQP 370
DEKKRFEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 302 DEKKRFEEGKGRYLQMKAKRQGHAEPQP 329
Score = 74.3 bits (181), Expect = 2e-13
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 36 PDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALA 95
P+ + S + ++ P D + G VHGG +K+++E I++ RHC + A
Sbjct: 169 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTN------IVTA 222
Query: 96 RVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPL 155
V+ +F + G V +S +T+TS S+E++V V ++ ++ ++K A+ ++ +
Sbjct: 223 SVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYV 282
Query: 156 SLKNVDKVLEVPPVVYSRQEQE---EEGRKRYEAQKLER 191
SL + L VP +V ++++ EEG+ RY K +R
Sbjct: 283 SLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKR 321
>gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]
Length = 380
Score = 647 bits (1670), Expect = 0.0
Identities = 329/350 (94%), Positives = 331/350 (94%), Gaps = 2/350 (0%)
Query: 23 PAASAAAAPSMSGPDVETP--SAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTR 80
P A + GP + P A RIMRPDDANVAGNVHGGTILKMIEEAGAIISTR
Sbjct: 31 PRRGCCAPVQVVGPRADLPPCGACITGRIMRPDDANVAGNVHGGTILKMIEEAGAIISTR 90
Query: 81 HCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTG 140
HCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTG
Sbjct: 91 HCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTG 150
Query: 141 AKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGD 200
AKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGD
Sbjct: 151 AKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGD 210
Query: 201 IVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNI 260
IVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNI
Sbjct: 211 IVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNI 270
Query: 261 VTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFF 320
VTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFF
Sbjct: 271 VTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFF 330
Query: 321 TYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP 370
TYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 331 TYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP 380
>gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]
Length = 350
Score = 643 bits (1659), Expect = 0.0
Identities = 322/323 (99%), Positives = 323/323 (100%)
Query: 48 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 107
+IMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC
Sbjct: 28 QIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 87
Query: 108 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 167
IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP
Sbjct: 88 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 147
Query: 168 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 227
PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS
Sbjct: 148 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 207
Query: 228 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 287
DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT
Sbjct: 208 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 267
Query: 288 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 347
FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR
Sbjct: 268 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 327
Query: 348 FEEGKGRYLQMKAKRQGHAEPQP 370
FEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 328 FEEGKGRYLQMKAKRQGHAEPQP 350
Score = 74.3 bits (181), Expect = 2e-13
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 36 PDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALA 95
P+ + S + ++ P D + G VHGG +K+++E I++ RHC + A
Sbjct: 190 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTN------IVTA 243
Query: 96 RVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPL 155
V+ +F + G V +S +T+TS S+E++V V ++ ++ ++K A+ ++ +
Sbjct: 244 SVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYV 303
Query: 156 SLKNVDKVLEVPPVVYSRQEQE---EEGRKRYEAQKLER 191
SL + L VP +V ++++ EEG+ RY K +R
Sbjct: 304 SLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKR 342
>gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
Length = 555
Score = 89.7 bits (221), Expect = 4e-18
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 41 PSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERT 100
P + + + ++P A G + G +LK I+ + + +H G CV A V+
Sbjct: 6 PGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVDDI 59
Query: 101 DFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP------ 154
F +G+V + A++T S+E+ + VM +++LTG +KL + A +V
Sbjct: 60 QFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKE 119
Query: 155 -LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTV 213
+ LK V + E V ++ + + R ++E M+ + D++ + E V
Sbjct: 120 KIHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEGAV 176
Query: 214 SYSQSSL--IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH 271
S +S+ I LV P HG GG M M+ VA I A+R C + SVD F
Sbjct: 177 STRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFR 236
Query: 272 DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQEGR 330
G + + + T +E+ V V+A + ++ R R SAF Y + +
Sbjct: 237 GPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKEN 296
Query: 331 SLPVPQLVPETEDEKKRF 348
+ P++ P ++D+ +R+
Sbjct: 297 LITFPRIQPISKDDFRRY 314
Score = 59.7 bits (143), Expect = 4e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 208 PEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDA 267
P P V SQ+ + P+ T G + G +K +D A + A +H + VTASVD
Sbjct: 4 PAPGEVVMSQA-----IQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDD 58
Query: 268 INFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQ 327
I F + R G VITI ++T + SMEI + V ++ +K A + F + +
Sbjct: 59 IQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGK 118
Query: 328 EGRSLPVPQLVPETE 342
E L L+ E +
Sbjct: 119 EKIHLKPVTLLTEQD 133
>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
sapiens]
Length = 594
Score = 81.3 bits (199), Expect = 1e-15
Identities = 74/333 (22%), Positives = 140/333 (42%), Gaps = 28/333 (8%)
Query: 35 GPDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL 94
G P+ +Q+ +++ P N G + G +LK I+ + + RH C
Sbjct: 38 GEGYRNPTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVT 91
Query: 95 ARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP 154
A ++ F + +G+V ++ A++ S+EV + V SE++ + + KA +V
Sbjct: 92 ASMDDIYFEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVA 151
Query: 155 LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------N 207
K+ ++ P EEE + A + RM + D ++ +L +
Sbjct: 152 RREITKVKLKQITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGD 203
Query: 208 PEPNTVSY------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIV 261
E S ++ + LV P G GG M M+ VA I A+R C+ +
Sbjct: 204 LESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPT 263
Query: 262 TASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFT 321
+++ +F + G + + + SME+ V V+A + +R+ SAF T
Sbjct: 264 LKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMT 322
Query: 322 YVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGR 354
+V L + + +P + P+ D ++R+ E R
Sbjct: 323 FVVLDADDQPQLLPWIRPQPGDGERRYREASAR 355
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 81.3 bits (199), Expect = 1e-15
Identities = 74/333 (22%), Positives = 140/333 (42%), Gaps = 28/333 (8%)
Query: 35 GPDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL 94
G P+ +Q+ +++ P N G + G +LK I+ + + RH C
Sbjct: 38 GEGYRNPTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVT 91
Query: 95 ARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP 154
A ++ F + +G+V ++ A++ S+EV + V SE++ + + KA +V
Sbjct: 92 ASMDDIYFEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVA 151
Query: 155 LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------N 207
K+ ++ P EEE + A + RM + D ++ +L +
Sbjct: 152 RREITKVKLKQITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGD 203
Query: 208 PEPNTVSY------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIV 261
E S ++ + LV P G GG M M+ VA I A+R C+ +
Sbjct: 204 LESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPT 263
Query: 262 TASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFT 321
+++ +F + G + + + SME+ V V+A + +R+ SAF T
Sbjct: 264 LKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMT 322
Query: 322 YVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGR 354
+V L + + +P + P+ D ++R+ E R
Sbjct: 323 FVVLDADDQPQLLPWIRPQPGDGERRYREASAR 355
>gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isoform a
[Homo sapiens]
Length = 448
Score = 45.8 bits (107), Expect = 6e-05
Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 50 MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 107
+R V V G IL+ ++ G +I H + + ++ A V++ D
Sbjct: 109 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 168
Query: 108 IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 155
E S +++ K S+EV++ V+ + A+ NK + PL
Sbjct: 169 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 228
Query: 156 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 212
++ ++ RQ + +GR+ + + L +M + + +P T
Sbjct: 229 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 282
Query: 213 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 258
+S+ S+ + + P + + + GG M+ E+A A +
Sbjct: 283 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 342
Query: 259 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 318
+VD I F + G ++ +S ++ FT N +++ V V +K++ +
Sbjct: 343 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 399
Query: 319 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 358
F FT++S + VP + P+T E + +G+ + M
Sbjct: 400 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 434
>gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isoform b
[Homo sapiens]
Length = 439
Score = 45.8 bits (107), Expect = 6e-05
Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 50 MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 107
+R V V G IL+ ++ G +I H + + ++ A V++ D
Sbjct: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
Query: 108 IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 155
E S +++ K S+EV++ V+ + A+ NK + PL
Sbjct: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 219
Query: 156 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 212
++ ++ RQ + +GR+ + + L +M + + +P T
Sbjct: 220 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 273
Query: 213 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 258
+S+ S+ + + P + + + GG M+ E+A A +
Sbjct: 274 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 333
Query: 259 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 318
+VD I F + G ++ +S ++ FT N +++ V V +K++ +
Sbjct: 334 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 390
Query: 319 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 358
F FT++S + VP + P+T E + +G+ + M
Sbjct: 391 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 425
>gi|38505292 voltage-dependent calcium channel alpha 1G subunit
isoform 3 [Homo sapiens]
Length = 2343
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 231 LH 232
H
Sbjct: 1576 SH 1577
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 231 LH 232
H
Sbjct: 1576 SH 1577
>gi|38505276 voltage-dependent calcium channel alpha 1G subunit
isoform 5 [Homo sapiens]
Length = 2321
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1598
Query: 231 LH 232
H
Sbjct: 1599 SH 1600
>gi|38505274 voltage-dependent calcium channel alpha 1G subunit
isoform 7 [Homo sapiens]
Length = 2298
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 231 LH 232
H
Sbjct: 1576 SH 1577
>gi|38505272 voltage-dependent calcium channel alpha 1G subunit
isoform 9 [Homo sapiens]
Length = 2273
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1598
Query: 231 LH 232
H
Sbjct: 1599 SH 1600
>gi|38505268 voltage-dependent calcium channel alpha 1G subunit
isoform 14 [Homo sapiens]
Length = 2171
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 230
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 231 LH 232
H
Sbjct: 1576 SH 1577
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 31.2 bits (69), Expect = 1.6
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 20 LQPPAAS---AAAAPSMSGPDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAI 76
++ PAA A AP+ + +V P + + A A + G++L + E A +
Sbjct: 1 MEVPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVRI--GSVLAVFEAAASA 58
Query: 77 ISTRHCNSQNGER-CVAALA-----RVERTDFLSPMCI--GEVAHVSAEITYTSKHSVEV 128
S+ S+ CV R ER + +C G+V A + S V
Sbjct: 59 QSSGASQSRVASGGCVRPARPERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPV 118
Query: 129 QVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQK 188
+ + +L +K VPLS V V VP ++ S ++ E+ GR+ + Q+
Sbjct: 119 VMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGRE--DQQR 176
Query: 189 LERMETKWRNGDIVQPVLN-PEPNTVSYSQSSLIHL-VGPSDCTLH 232
L R D+ Q +++ E + S + H +G + LH
Sbjct: 177 LHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLH 222
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 31.2 bits (69), Expect = 1.6
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 20 LQPPAAS---AAAAPSMSGPDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAI 76
++ PAA A AP+ + +V P + + A A + G++L + E A +
Sbjct: 1 MEVPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVRI--GSVLAVFEAAASA 58
Query: 77 ISTRHCNSQNGER-CVAALA-----RVERTDFLSPMCI--GEVAHVSAEITYTSKHSVEV 128
S+ S+ CV R ER + +C G+V A + S V
Sbjct: 59 QSSGASQSRVASGGCVRPARPERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPV 118
Query: 129 QVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQK 188
+ + +L +K VPLS V V VP ++ S ++ E+ GR+ + Q+
Sbjct: 119 VMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGRE--DQQR 176
Query: 189 LERMETKWRNGDIVQPVLN-PEPNTVSYSQSSLIHL-VGPSDCTLH 232
L R D+ Q +++ E + S + H +G + LH
Sbjct: 177 LHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLH 222
>gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 2 [Homo sapiens]
Length = 2277
Score = 30.8 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 22 PPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGNVHGGT 65
P +S + SGPD + S +Q CR++R D+ V GGT
Sbjct: 179 PGTSSNTNCQNSSGPDADPSSLLQDCRLLRIDELQVVKT--GGT 220
>gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 1 [Homo sapiens]
Length = 2796
Score = 30.8 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 22 PPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGNVHGGT 65
P +S + SGPD + S +Q CR++R D+ V GGT
Sbjct: 682 PGTSSNTNCQNSSGPDADPSSLLQDCRLLRIDELQVVKT--GGT 723
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.8 bits (68), Expect = 2.0
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 110 EVAHVSAEITYTSKHSVEVQVNVMS--ENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 167
+V + AE+ K V ++V S E + +L +++ L K K+ +
Sbjct: 1593 QVYSMKAELETKKKELEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIK 1652
Query: 168 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI 221
+ S+ E++EE K+ L + TK + + +L + +V SQS +
Sbjct: 1653 KQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETL 1706
>gi|15147337 ubiquitin protein ligase E3 component n-recognin 5
[Homo sapiens]
Length = 2799
Score = 30.8 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 22 PPAASAAAAPSMSGPDVETPSAIQICRIMRPDDANVAGNVHGGT 65
P +S + SGPD + S +Q CR++R D+ V GGT
Sbjct: 683 PGTSSNTNCQNSSGPDADPSSLLQDCRLLRIDELQVVKT--GGT 724
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505284 voltage-dependent calcium channel alpha 1G subunit
isoform 4 [Homo sapiens]
Length = 2332
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505282 voltage-dependent calcium channel alpha 1G subunit
isoform 8 [Homo sapiens]
Length = 2284
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505280 voltage-dependent calcium channel alpha 1G subunit
isoform 6 [Homo sapiens]
Length = 2306
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|38505278 voltage-dependent calcium channel alpha 1G subunit
isoform 11 [Homo sapiens]
Length = 2261
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|38505270 voltage-dependent calcium channel alpha 1G subunit
isoform 2 [Homo sapiens]
Length = 2354
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 173 RQEQEEEGRKRYEAQKLERMETKWRN 198
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|8922438 cell division cycle associated 8 [Homo sapiens]
Length = 280
Score = 30.0 bits (66), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 138 LTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLER 191
+T KLT +A PL KV++V ++ +E+EE RK + +++R
Sbjct: 93 ITEINKLTAEAI--QTPLKSAKTRKVIQVDEMIVEEEEEEENERKNLQTARVKR 144
>gi|188219593 TIA1 protein isoform 1 [Homo sapiens]
Length = 375
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 191 RMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLH-GFVHGGVTMKLM 244
++ T W P E NT S +++ PS+CT++ G V G+T +LM
Sbjct: 165 QIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLM 219
>gi|188219591 TIA1 protein isoform 2 [Homo sapiens]
Length = 386
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 191 RMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLH-GFVHGGVTMKLM 244
++ T W P E NT S +++ PS+CT++ G V G+T +LM
Sbjct: 176 QIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLM 230
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,698,995
Number of Sequences: 37866
Number of extensions: 668252
Number of successful extensions: 2849
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2791
Number of HSP's gapped (non-prelim): 51
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.