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Search of human proteins with 75677327
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens]
(457 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens] 902 0.0
gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens] 878 0.0
gi|4885637 target of myb1 isoform 1 [Homo sapiens] 490 e-138
gi|209180457 target of myb1 isoform 2 [Homo sapiens] 484 e-137
gi|209180448 target of myb1 isoform 3 [Homo sapiens] 425 e-119
gi|209180450 target of myb1 isoform 4 [Homo sapiens] 424 e-119
gi|191252812 target of myb1-like 1 [Homo sapiens] 187 2e-47
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 78 1e-14
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 67 4e-11
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 54 2e-07
gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens] 54 3e-07
gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] 53 5e-07
gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens] 50 3e-06
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 40 0.003
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 37 0.029
gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.037
gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.037
gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.037
gi|48527952 golgi associated, gamma adaptin ear containing, ARF ... 37 0.049
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 36 0.064
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 36 0.064
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 36 0.064
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 36 0.064
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 36 0.064
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 36 0.064
gi|109255236 centrosomal protein 63 isoform d [Homo sapiens] 36 0.083
gi|109255226 centrosomal protein 63 isoform c [Homo sapiens] 36 0.083
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 36 0.083
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 35 0.14
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 35 0.14
>gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens]
Length = 457
Score = 902 bits (2330), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG
Sbjct: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
Query: 61 NRNYREVMLALTAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 120
NRNYREVMLALTAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP
Sbjct: 61 NRNYREVMLALTAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 120
Query: 121 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDV 180
EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDV
Sbjct: 121 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDV 180
Query: 181 VRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLH 240
VRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLH
Sbjct: 181 VRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLH 240
Query: 241 VNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAP 300
VNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAP
Sbjct: 241 VNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAP 300
Query: 301 PSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAV 360
PSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAV
Sbjct: 301 PSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAV 360
Query: 361 GGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKA 420
GGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKA
Sbjct: 361 GGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKA 420
Query: 421 AEMVPDLPSPPMEAPAPASNPSGRKKPERSEDALFAL 457
AEMVPDLPSPPMEAPAPASNPSGRKKPERSEDALFAL
Sbjct: 421 AEMVPDLPSPPMEAPAPASNPSGRKKPERSEDALFAL 457
>gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens]
Length = 507
Score = 878 bits (2269), Expect = 0.0
Identities = 457/507 (90%), Positives = 457/507 (90%), Gaps = 50/507 (9%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG
Sbjct: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
Query: 61 NRNYREVMLALT------------------------------------------------ 72
NRNYREVMLALT
Sbjct: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
Query: 73 --AWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 130
AWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR
Sbjct: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 180
Query: 131 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 190
SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE
Sbjct: 181 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 240
Query: 191 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 250
MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL
Sbjct: 241 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 300
Query: 251 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 310
RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG
Sbjct: 301 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 360
Query: 311 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 370
LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR
Sbjct: 361 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 420
Query: 371 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 430
KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP
Sbjct: 421 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 480
Query: 431 PMEAPAPASNPSGRKKPERSEDALFAL 457
PMEAPAPASNPSGRKKPERSEDALFAL
Sbjct: 481 PMEAPAPASNPSGRKKPERSEDALFAL 507
>gi|4885637 target of myb1 isoform 1 [Homo sapiens]
Length = 492
Score = 490 bits (1261), Expect = e-138
Identities = 284/514 (55%), Positives = 345/514 (67%), Gaps = 79/514 (15%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALT------------------------------------------------ 72
N+N+ EVMLALT
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNL 120
Query: 73 --AWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSV--PEVDPAATM 128
+WADAFRSSPDLTGVV IYE+L+RKG+EFPM DLD LSPIHTPQR+V E
Sbjct: 121 IQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDS 180
Query: 129 PRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVM 188
+ S Q+ +G +++P PAP P LS PI EQI +LRSEL++V GN +VM
Sbjct: 181 VGTDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQIGKLRSELEMVSGNVRVM 234
Query: 189 SEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNV 248
SEMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++NE++TEELL VND+LNNV
Sbjct: 235 SEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNV 294
Query: 249 FLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQL 308
FLR+ERFER+R+G++ + S E D LID+GP + A +LSSQL
Sbjct: 295 FLRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP-----------DPAATGNLSSQL 339
Query: 309 AGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASAL 367
AG++LG+ SV L SL+ D FDMFA TRG+SLA+QRK V YE PQA GLA AL
Sbjct: 340 AGMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGAL 399
Query: 368 DNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTSEEFDKFLEERAKAAEMVP 425
D R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTSEEFDKFLEERAKAA+ +P
Sbjct: 400 DARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTSEEFDKFLEERAKAADRLP 458
Query: 426 DLPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 457
+L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 459 NLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 492
>gi|209180457 target of myb1 isoform 2 [Homo sapiens]
Length = 493
Score = 484 bits (1245), Expect = e-137
Identities = 283/515 (54%), Positives = 345/515 (66%), Gaps = 80/515 (15%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALT------------------------------------------------ 72
N+N+ EVMLALT
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNL 120
Query: 73 --AWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSV--PEVDPAATM 128
+WADAFRSSPDLTGVV IYE+L+RKG+EFPM DLD LSPIHTPQR+V E
Sbjct: 121 IQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDS 180
Query: 129 PRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVM 188
+ S Q+ +G +++P PAP P LS PI EQI +LRSEL++V GN +VM
Sbjct: 181 VGTDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQIGKLRSELEMVSGNVRVM 234
Query: 189 SEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNV 248
SEMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++NE++TEELL VND+LNNV
Sbjct: 235 SEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNV 294
Query: 249 FLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQL 308
FLR+ERFER+R+G++ + S E D LID+GP + A +LSSQL
Sbjct: 295 FLRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP-----------DPAATGNLSSQL 339
Query: 309 AGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASAL 367
AG++LG+ SV L SL+ D FDMFA TRG+SLA+QRK V YE PQA GLA AL
Sbjct: 340 AGMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGAL 399
Query: 368 DNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTSE-EFDKFLEERAKAAEMV 424
D R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTSE +FDKFLEERAKAA+ +
Sbjct: 400 DARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTSEGKFDKFLEERAKAADRL 458
Query: 425 PDLPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 457
P+L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 459 PNLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 493
>gi|209180448 target of myb1 isoform 3 [Homo sapiens]
Length = 460
Score = 425 bits (1093), Expect = e-119
Identities = 255/482 (52%), Positives = 314/482 (65%), Gaps = 80/482 (16%)
Query: 34 MEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALT--------------------- 72
MEICDIINETEEGPKDA+RA+KKR+ GN+N+ EVMLALT
Sbjct: 1 MEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQD 60
Query: 73 -----------------------------AWADAFRSSPDLTGVVHIYEELKRKGVEFPM 103
+WADAFRSSPDLTGVV IYE+L+RKG+EFPM
Sbjct: 61 FVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPM 120
Query: 104 ADLDALSPIHTPQRSV--PEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVT 161
DLD LSPIHTPQR+V E + S Q+ +G +++P PAP P LS
Sbjct: 121 TDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQHAAPLPAP------PILSGD 174
Query: 162 GPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQR 221
PI EQI +LRSEL++V GN +VMSEMLTE+VP Q + +DLELLQELNRTCRAMQQR
Sbjct: 175 TPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQR 234
Query: 222 IVELISRVSNEEVTEELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLI 281
++ELI +++NE++TEELL VND+LNNVFLR+ERFER+R+G++ + S E D LI
Sbjct: 235 VLELIPQIANEQLTEELLIVNDNLNNVFLRHERFERFRTGQTTKAPSEA---EPAAD-LI 290
Query: 282 DLGPGSPAVVSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQT 340
D+GP + A +LSSQLAG++LG+ SV L SL+ D FDMFA T
Sbjct: 291 DMGP-----------DPAATGNLSSQLAGMNLGSSSVRAGLQSLEASGRLEDEFDMFALT 339
Query: 341 RGNSLAEQRKTVTYEDPQAVGGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDD 400
RG+SLA+QRK V YE PQA GLA ALD R+QS+ IPV Q +M+DIE WL TD+ G+D
Sbjct: 340 RGSSLADQRKEVKYEAPQATDGLAGALDARQQSTGAIPVTQACLMEDIEQWLSTDV-GND 398
Query: 401 LEE--GVTSE-EFDKFLEERAKAAEMVPDLPSPPMEA-PAPASNPSGRKK-PERSEDALF 455
EE GVTSE +FDKFLEERAKAA+ +P+L SP E P P S P+ RKK E+ +D LF
Sbjct: 399 AEEPKGVTSEGKFDKFLEERAKAADRLPNLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLF 458
Query: 456 AL 457
AL
Sbjct: 459 AL 460
>gi|209180450 target of myb1 isoform 4 [Homo sapiens]
Length = 447
Score = 424 bits (1090), Expect = e-119
Identities = 254/472 (53%), Positives = 316/472 (66%), Gaps = 40/472 (8%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALTAWADAFRS----------SPDLTGVVHIYEELKRKGVEFPMADLDALS 110
N+N+ EVMLALT ++ S D V + L + + D L+
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHD-KVLN 119
Query: 111 PIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQ 170
I T S E + S Q+ +G +++P PAP P LS PI EQ
Sbjct: 120 LIQTVFNS--ETQSGQDSVGTDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQ 171
Query: 171 IARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVS 230
I +LRSEL++V GN +VMSEMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++
Sbjct: 172 IGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIA 231
Query: 231 NEEVTEELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAV 290
NE++TEELL VND+LNNVFLR+ERFER+R+G++ + S E D LID+GP
Sbjct: 232 NEQLTEELLIVNDNLNNVFLRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP----- 282
Query: 291 VSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQR 349
+ A +LSSQLAG++LG+ SV L SL+ D FDMFA TRG+SLA+QR
Sbjct: 283 ------DPAATGNLSSQLAGMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQR 336
Query: 350 KTVTYEDPQAVGGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTS 407
K V YE PQA GLA ALD R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTS
Sbjct: 337 KEVKYEAPQATDGLAGALDARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTS 395
Query: 408 EEFDKFLEERAKAAEMVPDLPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 457
EEFDKFLEERAKAA+ +P+L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 396 EEFDKFLEERAKAADRLPNLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 447
>gi|191252812 target of myb1-like 1 [Homo sapiens]
Length = 476
Score = 187 bits (475), Expect = 2e-47
Identities = 129/386 (33%), Positives = 189/386 (48%), Gaps = 91/386 (23%)
Query: 7 NPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYRE 66
+P++T VG +EKAT +Q+EDW M ICDIIN T++GPKDA++ALKKR++ N N++E
Sbjct: 9 DPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKE 68
Query: 67 VMLALT--------------------------------------------------AWAD 76
+ L L+ W+
Sbjct: 69 IQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQ 128
Query: 77 AFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQR 136
F D++ V +Y +L +KGV+FP ++ +A R
Sbjct: 129 GFPGGVDVSEVKEVYLDLVKKGVQFPPSEAEA------------------------ETAR 164
Query: 137 TSAGSYSSPPPAPYSAPQAPALS-VTGP----ITANSEQIARLRSELDVVRGNTKVMSEM 191
SS PP S P APALS V P +T EQI +L SELD+V+ N +VMS +
Sbjct: 165 QETAQISSNPPT--SVPTAPALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAI 222
Query: 192 LTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFLR 251
L E PG E+ D+ELLQ+L +T R MQ+RI++L+ V NE+VT EL+ VN+DLNN L
Sbjct: 223 LMENTPGSENHEDIELLQKLYKTGREMQERIMDLLVVVENEDVTVELIQVNEDLNNAILG 282
Query: 252 YERFERYRSGRSVQNASNGVLNEVTED------NLIDLGPGSPAVVSPMVGNTAPPSSLS 305
YERF R + QN + T + +L+DL P SP + +G ++++
Sbjct: 283 YERFTRNQQRILEQNKNQKEATNTTSEPSAPSQDLLDLSP-SPRMPRATLGEL---NTMN 338
Query: 306 SQLAGLDLGTESVSGTLSSLQQCNPR 331
+QL+GL+ S T + +P+
Sbjct: 339 NQLSGLNFSLPSSDVTNNLKPSLHPQ 364
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 78.2 bits (191), Expect = 1e-14
Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 54/356 (15%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAWAD 76
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALT D
Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTYLGD 71
Query: 77 AFRSS----------------PDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 120
P+ + Y LKR+G+ + + PI + +P
Sbjct: 72 RVSEKVKTKVIELLYSWTMALPEEAKIKDAYHMLKRQGI------VQSDPPIPVDRTLIP 125
Query: 121 EVDPAATMPRSQSQQRTS--AGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSEL 178
P P ++++ A S P S+ A +++ + L
Sbjct: 126 SPPPRPKNPVFDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTL 185
Query: 179 DVVRGNTKVMSEMLTEMVPGQEDSS--DLELLQELNRTCRAMQQRIVELISRV-SNEEVT 235
+ V N +++SEML QEDSS D EL++EL C ++ + +L S N+
Sbjct: 186 EEVNNNVRLLSEMLLHY--SQEDSSDGDRELMKELFDQCENKRRTLFKLASETEDNDNSL 243
Query: 236 EELLHVNDDLNNVFLRYERFERYR-------------SGRSVQNASNGVLNEVTE----- 277
++L +D+L+ V Y+ + S + Q ++ G L ++ E
Sbjct: 244 GDILQASDNLSRVINSYKTIIEGQVINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTN 303
Query: 278 --DNLIDLGPGSPA----VVSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQ 327
+++ P P+ ++ P + PP S SS A LG S S LS L +
Sbjct: 304 SLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDE 359
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 66.6 bits (161), Expect = 4e-11
Identities = 90/383 (23%), Positives = 151/383 (39%), Gaps = 75/383 (19%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAW-- 74
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALT
Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
Query: 75 ------------ADAFRSSPDLTGVV-------HIYEELKRKGVEFPMADLDALS----- 110
FR +L VV + E++K K +E + AL
Sbjct: 72 CMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPEEAKI 131
Query: 111 -----------------PIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAP 153
PI + +P P P ++++ + P
Sbjct: 132 KDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNPDDLQ 191
Query: 154 QAPAL--SVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSS--DLELLQ 209
+A L S+ A +++ + L+ V N +++SEML QEDSS D EL++
Sbjct: 192 EANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHY--SQEDSSDGDRELMK 249
Query: 210 ELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERYR--------- 259
EL C ++ + +L S N+ ++L +D+L+ V Y+ +
Sbjct: 250 ELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEVATL 309
Query: 260 ----SGRSVQNASNGVLNEVTE-------DNLIDLGPGSPA----VVSPMVGNTAPPSSL 304
S + Q ++ G L ++ E +++ P P+ ++ P + PP S
Sbjct: 310 TLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSR 369
Query: 305 SSQLAGLDLGTESVSGTLSSLQQ 327
SS A LG S S LS L +
Sbjct: 370 SSSQAEATLGPSSTSNALSWLDE 392
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 54.3 bits (129), Expect = 2e-07
Identities = 87/438 (19%), Positives = 161/438 (36%), Gaps = 76/438 (17%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAWAD 76
+ +AT+ + DW C+ +NE EGP A R L ++ + + E + ALT
Sbjct: 14 INRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEW-EAIQALTVLET 72
Query: 77 AFRSS-------------------------------------------------PDLTGV 87
+S P+ +
Sbjct: 73 CMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKI 132
Query: 88 VHIYEELKRKGV--EFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSP 145
Y+ LK++G+ P D P+ P+ P + + + + A S
Sbjct: 133 AEAYQMLKKQGIVKSDPKLPDDTTFPLPPPR-------PKNVIFEDEEKSKMLARLLKSS 185
Query: 146 PPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEM-LTEMVPGQEDSSD 204
P A + E+I++ + ++ V N K+++EM ++ G S
Sbjct: 186 HPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSS 245
Query: 205 LELLQELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERYR--SG 261
+L++EL + C M+ + L S N+E E+L ND+L V Y++ R +G
Sbjct: 246 EDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNG 305
Query: 262 RSVQNASNGVLNEVTEDNLIDLGPGSPA--VVSPMVGNTAPPSSLSSQLAGLDLGTESVS 319
+ + G + + + + +DL P + G A P S+ ++ LD S+
Sbjct: 306 DATAGSIPGSTSALLDLSGLDLPPAGTTYPAMPTRPGEQASPEQPSASVSLLDDELMSL- 364
Query: 320 GTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNRKQSSEGIPV 379
L P G + T NS T E P A ++++R + +P
Sbjct: 365 ----GLSDPTPPSGPSLDG-TGWNSFQSSDAT---EPPAPALAQAPSMESRPPAQTSLPA 416
Query: 380 AQPSVMDDIEVWLRTDLK 397
+ S +DD+++ +T L+
Sbjct: 417 S--SGLDDLDLLGKTLLQ 432
>gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens]
Length = 540
Score = 53.9 bits (128), Expect = 3e-07
Identities = 50/239 (20%), Positives = 87/239 (36%), Gaps = 47/239 (19%)
Query: 10 STPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG--------- 60
+ P Q +EKAT +EDW L ++ICD + ++ GPKD +R++ +R+N
Sbjct: 6 TNPFDQDVEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQA 65
Query: 61 --------------------------------NRNYREVMLALTA----WADAFRSSPDL 84
N+ + +V L A W D F++ P L
Sbjct: 66 LTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWTDEFKNDPQL 125
Query: 85 TGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSS 144
+ + + + LK +GV FP A V + DP + + + A S
Sbjct: 126 SLISAMIKNLKEQGVTFPAIGSQAAEQAKASPALVAK-DPGTVANKKEEEDLAKAIELSL 184
Query: 145 PPPAPYSAPQAPALSVTGPITANSEQIAR-LRSELDVVRGNTKVMSEMLTEMVPGQEDS 202
S + T + N + R +R+ D ++ E++ +DS
Sbjct: 185 KEQRQQSTTLSTLYPSTSSLLTNHQHEGRKVRAIYDFEAAEDNELTFKAGEIITVLDDS 243
>gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]
Length = 613
Score = 53.1 bits (126), Expect = 5e-07
Identities = 81/380 (21%), Positives = 140/380 (36%), Gaps = 78/380 (20%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAW-- 74
L KATD S+ +DW+ C+ +N GP A L ++ + +E + ALT
Sbjct: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
Query: 75 -----ADAFRS---------------SPDLTG----------VVHI-------------- 90
+ F S SP G V+ I
Sbjct: 89 CMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKI 148
Query: 91 ---YEELKRKGV--EFPMADLDALSPIHTP--QRSVPEVDPAATMPRSQSQQRTSAGSYS 143
Y+ LK++G+ + P +D + P +P + S+ + D + + +
Sbjct: 149 RDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDAD--------EEKSKLLTRLLK 200
Query: 144 SPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSS 203
S P A ++ SE++++ S ++ VR + KV+ EML+ +
Sbjct: 201 SNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPP 260
Query: 204 DLELLQELNRTCRAMQQRIVELIS-RVSNEEVTEELLHVNDDLNNVFLRYERFERYR--- 259
D E LQ + C ++ + L S +++ E+L ND L L Y++ R
Sbjct: 261 DQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTF 320
Query: 260 SGRSVQNASNGVLNEVTED--------NLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGL 311
R + + ++ V ++ LIDL + P T PS L LA L
Sbjct: 321 GNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDN----GPAQMGTVVPSLLHQDLAAL 376
Query: 312 DLGTESVSGTLSSLQQCNPR 331
+ V+G +S C +
Sbjct: 377 GISDAPVTGMVSGQNCCEEK 396
>gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens]
Length = 525
Score = 50.4 bits (119), Expect = 3e-06
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLN 59
M NPF Q +EKAT+ +EDW+L M+ICD + T G KD ++A+ KR+N
Sbjct: 1 MPLFTANPFE----QDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVN 55
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 46/132 (34%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNY------------ 64
L+KAT L DW ++ICD+I + + K A+ ++KK++N +
Sbjct: 12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESV 71
Query: 65 ----------------------------------REVMLALTAWADAFRSSPDLTGVVHI 90
+++ + AWA AFR+ P V
Sbjct: 72 VKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDT 131
Query: 91 YEELKRKGVEFP 102
Y+ +K +G FP
Sbjct: 132 YQIMKVEGHVFP 143
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 37.4 bits (85), Expect = 0.029
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 74 WADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQS 133
WA SPDL GV E +++ V+ ++ S H+ SV + M + S
Sbjct: 648 WAKLEERSPDLPGVRSKELEQRKRWVKAKELAVEGPSQEHSRPFSVEALTLTKLMITANS 707
Query: 134 QQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVR 182
+++ S + S P + PQA A S+ + + Q++ L + VVR
Sbjct: 708 KEQPSKSALVSLPSWLLATPQASATSMMASVPSRPGQLSLLEGKPVVVR 756
>gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.037
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 115 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 174
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 175 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 232
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 233 EVTEELLHVNDDLNNVFLRYERF 255
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.037
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 115 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 174
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 175 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 232
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 233 EVTEELLHVNDDLNNVFLRYERF 255
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.037
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 115 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 174
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 175 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 232
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 233 EVTEELLHVNDDLNNVFLRYERF 255
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|48527952 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 2 [Homo sapiens]
Length = 552
Score = 36.6 bits (83), Expect = 0.049
Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 63/279 (22%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAWAD 76
+ +AT+ + DW C+ +NE EGP A R L ++ + + E + ALT
Sbjct: 14 INRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEW-EAIQALTVLET 72
Query: 77 AFRSS-------------------------------------------------PDLTGV 87
+S P+ +
Sbjct: 73 CMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKI 132
Query: 88 VHIYEELKRKGV--EFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSP 145
Y+ LK++G+ P D P+ P+ P + + + + A S
Sbjct: 133 AEAYQMLKKQGIVKSDPKLPDDTTFPLPPPR-------PKNVIFEDEEKSKMLARLLKSS 185
Query: 146 PPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEM-LTEMVPGQEDSSD 204
P A + E+I++ + ++ V N K+++EM ++ G S
Sbjct: 186 HPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSS 245
Query: 205 LELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVND 243
+L++EL + C M+ + L S+ E +E L ++D
Sbjct: 246 EDLMKELYQRCERMRPTLFRL---ASDTEDNDEALGLSD 281
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 99 VEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPAL 158
+E P+ L P TPQ + + P+ +P S T AG+ +P P+P S + P
Sbjct: 145 LETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGR-PWA 203
Query: 159 SVTGP 163
+TGP
Sbjct: 204 PLTGP 208
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 99 VEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPAL 158
+E P+ L P TPQ + + P+ +P S T AG+ +P P+P S + P
Sbjct: 145 LETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGR-PWA 203
Query: 159 SVTGP 163
+TGP
Sbjct: 204 PLTGP 208
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 108 ALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 163
A +P TP P P + + Q SAGS S P P P P PA TGP
Sbjct: 590 APAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 108 ALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 163
A +P TP P P + + Q SAGS S P P P P PA TGP
Sbjct: 590 APAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 108 ALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 163
A +P TP P P + + Q SAGS S P P P P PA TGP
Sbjct: 590 APAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 108 ALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 163
A +P TP P P + + Q SAGS S P P P P PA TGP
Sbjct: 451 APAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 506
>gi|109255236 centrosomal protein 63 isoform d [Homo sapiens]
Length = 475
Score = 35.8 bits (81), Expect = 0.083
Identities = 66/314 (21%), Positives = 124/314 (39%), Gaps = 37/314 (11%)
Query: 32 LNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAWADAFR-SSPDLTGVVHI 90
L+ E+C + E+ K +R + +R R + LTA + FR S D I
Sbjct: 103 LHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIERLTAKIEEFRQKSLDWEKQRLI 162
Query: 91 YEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPY 150
Y++ +S + ++++ E +Q+ + SS +
Sbjct: 163 YQQ--------------QVSSLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQH 208
Query: 151 SAPQAPALSVTGPITANSEQIARLRSEL-DVVRGNTKVMSEMLTEMVPGQEDSSDLELLQ 209
+ + + T I AN +I RL + D+V + V+ E + +E LE LQ
Sbjct: 209 LSSKLERANDT--ICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEALQ 266
Query: 210 ELNRTCRAMQQRIVELI--SRVSNEEVTEELLHVND-------DLNNVF-----LRYERF 255
E R +A Q LI +R+ E++ E++ N L +V L E
Sbjct: 267 EEKRELKAALQSQENLIHEARIQKEKLQEKVKATNTQHAVEAISLESVSATCKQLSQELM 326
Query: 256 ERYRSGRSVQNASNGVLNEV--TEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGLDL 313
E+Y + ++ +N E+ ++ ++ G + S + G S L+ +L D+
Sbjct: 327 EKYEELKRMEAHNNEYKAEIKKLKEQILQ---GEQSYSSALEGMKMEISHLTQELHQRDI 383
Query: 314 GTESVSGTLSSLQQ 327
S G+ S +++
Sbjct: 384 TIASTKGSSSDMEK 397
>gi|109255226 centrosomal protein 63 isoform c [Homo sapiens]
Length = 495
Score = 35.8 bits (81), Expect = 0.083
Identities = 66/314 (21%), Positives = 124/314 (39%), Gaps = 37/314 (11%)
Query: 32 LNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAWADAFR-SSPDLTGVVHI 90
L+ E+C + E+ K +R + +R R + LTA + FR S D I
Sbjct: 103 LHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIERLTAKIEEFRQKSLDWEKQRLI 162
Query: 91 YEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPY 150
Y++ +S + ++++ E +Q+ + SS +
Sbjct: 163 YQQ--------------QVSSLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQH 208
Query: 151 SAPQAPALSVTGPITANSEQIARLRSEL-DVVRGNTKVMSEMLTEMVPGQEDSSDLELLQ 209
+ + + T I AN +I RL + D+V + V+ E + +E LE LQ
Sbjct: 209 LSSKLERANDT--ICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEALQ 266
Query: 210 ELNRTCRAMQQRIVELI--SRVSNEEVTEELLHVND-------DLNNVF-----LRYERF 255
E R +A Q LI +R+ E++ E++ N L +V L E
Sbjct: 267 EEKRELKAALQSQENLIHEARIQKEKLQEKVKATNTQHAVEAISLESVSATCKQLSQELM 326
Query: 256 ERYRSGRSVQNASNGVLNEV--TEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGLDL 313
E+Y + ++ +N E+ ++ ++ G + S + G S L+ +L D+
Sbjct: 327 EKYEELKRMEAHNNEYKAEIKKLKEQILQ---GEQSYSSALEGMKMEISHLTQELHQRDI 383
Query: 314 GTESVSGTLSSLQQ 327
S G+ S +++
Sbjct: 384 TIASTKGSSSDMEK 397
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 35.8 bits (81), Expect = 0.083
Identities = 59/231 (25%), Positives = 78/231 (33%), Gaps = 33/231 (14%)
Query: 102 PMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVT 161
P A LD + +P P+A P+SQ PPPAP SAP PAL
Sbjct: 272 PRAKLDQAPKVPPTPEPLPLSTPSAGTPQSQPPPLPPP-----PPPAPGSAP--PALPPE 324
Query: 162 GP-------ITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRT 214
GP + NS A NT + + PG + SS
Sbjct: 325 GPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSAPGPALLGEAA 384
Query: 215 CRAMQQRIVELISRVSNEEVT--EELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVL 272
QR + +S E++ E L D+ + LR E + G A G
Sbjct: 385 APGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLRSGETEPFLKGPP-GGAGEG-- 441
Query: 273 NEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSL---SSQLAGLDLGTESVSG 320
GP + A P TAPPS L L + T+S+ G
Sbjct: 442 -----------GPPAQAPPPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGG 481
Score = 33.1 bits (74), Expect = 0.54
Identities = 45/167 (26%), Positives = 62/167 (37%), Gaps = 14/167 (8%)
Query: 285 PGSPAVVSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNS 344
P +P P + PP S LA +G S G P A T N
Sbjct: 311 PPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPT------ATTANNP 364
Query: 345 LAEQRKTVTYEDPQAVGGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRT--DLKGDDLE 402
L + P A+ G A+A N ++S G ++ E L+T D++ L
Sbjct: 365 LPPGGDPSSAPGP-ALLGEAAAPGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLR 423
Query: 403 EGVTSEEFDKFLE-ERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPE 448
G T + FL+ A E P +PP P + PSG KK E
Sbjct: 424 SGET----EPFLKGPPGGAGEGGPPAQAPPPPQQPPTAPPSGLKKYE 466
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 35.0 bits (79), Expect = 0.14
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 342 GNSLAEQRKTVTYEDPQAVGG---LASALDNRKQSSE----GIPVAQP---SVMDDIEVW 391
G + EQ+ EDPQ +G L A +N K + G ++QP S +D E+
Sbjct: 208 GPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELR 267
Query: 392 L-RTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPERS 450
L D +G L EG +E E A A ++P+LP+ A A PSG + E
Sbjct: 268 LVERDPQGSSLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEE 327
Query: 451 E 451
+
Sbjct: 328 Q 328
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 35.0 bits (79), Expect = 0.14
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 342 GNSLAEQRKTVTYEDPQAVGG---LASALDNRKQSSE----GIPVAQP---SVMDDIEVW 391
G + EQ+ EDPQ +G L A +N K + G ++QP S +D E+
Sbjct: 208 GPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELR 267
Query: 392 L-RTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPERS 450
L D +G L EG +E E A A ++P+LP+ A A PSG + E
Sbjct: 268 LVERDPQGSSLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEE 327
Query: 451 E 451
+
Sbjct: 328 Q 328
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,418,523
Number of Sequences: 37866
Number of extensions: 886242
Number of successful extensions: 6532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 6250
Number of HSP's gapped (non-prelim): 387
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.