Guide to the Human Genome
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Name: LOC728715 Sequence: fasta or formatted (95aa) NCBI GI: 239744557
Description:

PREDICTED: hypothetical protein LOC728715

Not currently referenced in the text

Other entries for this name:
alt prot {95aa} PREDICTED: similar to hCG38149
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          5           1
 C cysteine            0.0          0           0
 D aspartate           5.3          5           1
 E glutamate          10.5         10           2
 F phenylalanine       7.4          7           1
 G glycine             4.2          4           1
 H histidine           1.1          1           1
 I isoleucine          4.2          4           1
 K lysine              5.3          5           1
 L leucine             6.3          6           1
 M methionine          5.3          5           1
 N asparagine          6.3          6           1
 P proline             4.2          4           1
 Q glutamine           3.2          3           1
 R arginine            1.1          1           1
 S serine             10.5         10           3
 T threonine           3.2          3           1
 V valine             10.5         10           2
 W tryptophan          0.0          0           0
 Y tyrosine            6.3          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC728715 
OVOS                  1.000   PREDICTED: ovostatin 
LOC728715             0.994   PREDICTED: similar to hCG38149 
OVOS2                 0.783   PREDICTED: ovostatin 2 
PZP                   0.319   pregnancy-zone protein 
A2M                   0.319   alpha-2-macroglobulin precursor 
A2ML1                 0.223   alpha-2-macroglobulin-like 1 
C4A                   0.151   complement component 4A preproprotein 
C4B                   0.151   complement component 4B preproprotein 
LOC100293534          0.151   PREDICTED: similar to complement component 4B (Chil...
LOC100294156          0.151   PREDICTED: similar to C4A protein isoform 1 
OVOS                  0.139   PREDICTED: ovostatin 
OVOS2                 0.133   PREDICTED: ovostatin 2 
CPAMD8                0.127   C3 and PZP-like, alpha-2-macroglobulin domain conta...
C3                    0.114   complement component 3 precursor 
LOC653879             0.114   PREDICTED: similar to complement component 3 
LOC100294156          0.078   PREDICTED: similar to C4A protein isoform 2 
CD109                 0.048   CD109 antigen isoform 3 precursor 
CD109                 0.048   CD109 antigen isoform 2 precursor 
CD109                 0.048   CD109 antigen isoform 1 precursor 
C13orf23              0.018   hypothetical protein LOC80209 isoform 2 
C13orf23              0.018   hypothetical protein LOC80209 isoform 1 
CYFIP1                0.012   cytoplasmic FMR1 interacting protein 1 isoform a [Ho...
C5                    0.012   complement component 5 preproprotein 
CYFIP2                0.012   cytoplasmic FMR1 interacting protein 2 
CYFIP2                0.012   cytoplasmic FMR1 interacting protein 2 
CYFIP2                0.012   cytoplasmic FMR1 interacting protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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