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Search of human proteins with 73760407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
(431 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi... 884 0.0
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap... 867 0.0
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens] 867 0.0
gi|118582289 transcription factor AP-2 beta [Homo sapiens] 592 e-169
gi|4507445 transcription factor AP-2 gamma [Homo sapiens] 506 e-143
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 495 e-140
gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens] 353 2e-97
gi|124378039 SEC16 homolog A [Homo sapiens] 40 0.004
gi|47578107 delangin isoform B [Homo sapiens] 39 0.007
gi|47578105 delangin isoform A [Homo sapiens] 39 0.007
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 39 0.009
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom... 39 0.012
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.016
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.016
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 38 0.020
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.027
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|150417989 cyclin K isoform 1 [Homo sapiens] 37 0.027
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 37 0.035
gi|162951884 R3H domain containing 2 [Homo sapiens] 37 0.045
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 36 0.077
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.077
gi|238859557 regulatory factor X1 [Homo sapiens] 35 0.10
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ... 35 0.10
gi|239757254 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 35 0.13
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 35 0.13
>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
Length = 431
Score = 884 bits (2284), Expect = 0.0
Identities = 431/431 (100%), Positives = 431/431 (100%)
Query: 1 MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY 60
MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY
Sbjct: 1 MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY 60
Query: 61 PQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRD 120
PQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRD
Sbjct: 61 PQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRD 120
Query: 121 YRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSN 180
YRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSN
Sbjct: 121 YRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSN 180
Query: 181 SNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNA 240
SNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNA
Sbjct: 181 SNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNA 240
Query: 241 SLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGY 300
SLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGY
Sbjct: 241 SLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGY 300
Query: 301 VCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNP 360
VCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNP
Sbjct: 301 VCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNP 360
Query: 361 ILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNA 420
ILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNA
Sbjct: 361 ILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNA 420
Query: 421 KSSDKEEKHRK 431
KSSDKEEKHRK
Sbjct: 421 KSSDKEEKHRK 431
>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
Length = 433
Score = 867 bits (2240), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 69
DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH
Sbjct: 12 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 71
Query: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129
VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH
Sbjct: 72 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 131
Query: 130 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 189
GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI
Sbjct: 132 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 191
Query: 190 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 249
NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR
Sbjct: 192 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 251
Query: 250 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 309
AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK
Sbjct: 252 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 311
Query: 310 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 369
AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC
Sbjct: 312 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 371
Query: 370 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 429
LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH
Sbjct: 372 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 431
Query: 430 RK 431
RK
Sbjct: 432 RK 433
>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
Length = 437
Score = 867 bits (2240), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 69
DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH
Sbjct: 16 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 75
Query: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129
VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH
Sbjct: 76 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 135
Query: 130 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 189
GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI
Sbjct: 136 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 195
Query: 190 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 249
NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR
Sbjct: 196 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 255
Query: 250 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 309
AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK
Sbjct: 256 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 315
Query: 310 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 369
AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC
Sbjct: 316 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 375
Query: 370 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 429
LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH
Sbjct: 376 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 435
Query: 430 RK 431
RK
Sbjct: 436 RK 437
>gi|118582289 transcription factor AP-2 beta [Homo sapiens]
Length = 460
Score = 592 bits (1525), Expect = e-169
Identities = 318/442 (71%), Positives = 363/442 (82%), Gaps = 29/442 (6%)
Query: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPI-YPQSQDPYS 68
DRHDG + ++RL QLG+V Q PY+SAPPLSHTP++DFQPPYFPPPYQP+ Y QSQDPYS
Sbjct: 28 DRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYS 87
Query: 69 HVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-----LLHTHRGLPHQLSGLDPRRDY-- 121
HVNDPYSLNPLH QPQ QHP W GQRQ QE G LL R QLSGLDPRRDY
Sbjct: 88 HVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHS 143
Query: 122 -RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AIEEVPHVEDP---GINIPDQTVIKKGPV 174
RR + LLH H L +G+GD LS+H L H +E+V VED G+N+ DQ+VIKK PV
Sbjct: 144 VRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPV 203
Query: 175 SLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLS 233
+V+++ +NKD GG+ VN EVFCSVPGRLSLLSSTSKYKVTV EVQRRLS
Sbjct: 204 P-----PKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLS 258
Query: 234 PPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVH 293
PPECLNASLLGGVLRRAKSKNGGRSLRE+L+KIGLNLPAGRRKAANVTLLTSLVEGEAVH
Sbjct: 259 PPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVH 318
Query: 294 LARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPL 353
LARDFGY+CETEFPAKAV+E+LNRQH+DP++ +RKNMLLATKQ+CKEFTDLLAQDR+P+
Sbjct: 319 LARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPI 378
Query: 354 GNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSN-NP 412
GNSRP+PILEPGIQSCLTHF+LI+HGFG+PA+CAA+TALQNYLTEALK MDKM+L+N
Sbjct: 379 GNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTT 438
Query: 413 NSHTDN---NAKSSDKEEKHRK 431
N HT +K+ DKEEKHRK
Sbjct: 439 NRHTSGEGPGSKTGDKEEKHRK 460
>gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
Length = 450
Score = 506 bits (1303), Expect = e-143
Identities = 281/443 (63%), Positives = 336/443 (75%), Gaps = 30/443 (6%)
Query: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YFPPPYQPI-YPQSQDPY 67
DRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YFPPPYQ + Y QS DPY
Sbjct: 17 DRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPY 76
Query: 68 SHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHRG-----LPHQLSGLDP 117
SH+ + Y+ +NPLH QP P Q WPG RQSQE L +H G LPH LSGL+
Sbjct: 77 SHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHHGRPAGLLPH-LSGLEA 133
Query: 118 -----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEVPHVEDPGINIPDQTVI 169
RRD YRR + LL HAL ++GL + L +H +PH ++EV +V+D + + DQTVI
Sbjct: 134 GAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNVDDQHLLLHDQTVI 193
Query: 170 KKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQ 229
+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLSLLSSTSKYKVTVAEVQ
Sbjct: 194 RKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQ 248
Query: 230 RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEG 289
RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAA+VTLLTSLVEG
Sbjct: 249 RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEG 308
Query: 290 EAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNMLLATKQICKEFTDLLAQ 348
EAVHLARDF YVCE EFP+K VAE+L R H NE RKNMLLA +Q+CKEFT+LL+Q
Sbjct: 309 EAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTELLSQ 368
Query: 349 DRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYL 408
DR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+ALQNY+ EAL +DK Y+
Sbjct: 369 DRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEALIVIDKSYM 428
Query: 409 SNNPNSHTDNNAKSSDKEEKHRK 431
+ S D+N K+ +K EKHRK
Sbjct: 429 NPGDQSPADSN-KTLEKMEKHRK 450
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 495 bits (1274), Expect = e-140
Identities = 281/455 (61%), Positives = 333/455 (73%), Gaps = 37/455 (8%)
Query: 1 MLVHSFSAMDRHDG--TSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQPPYFPP 54
MLVH++SAM+R DG + G ARL L Q+ Y APPL HTP A +FQPPYFPP
Sbjct: 1 MLVHTYSAMERPDGLGAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQPPYFPP 57
Query: 55 PY-QPIYPQSQDP-----YSHV-NDPYS-LNPLHAQPQPQHPGWPGQRQSQES-----GL 101
PY QP P Q P + H+ DPY L PL AQPQP W R + + GL
Sbjct: 58 PYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAHEEPPGL 116
Query: 102 LHTHRGLPHQLSGLDPRRDYRRHED-LLHGPHALSSGLGD--LSIHSLPHA--IEEVPHV 156
L P + GLDPRRDY LLHG + GL D L + L A +E++ +
Sbjct: 117 LAP----PARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAM 172
Query: 157 EDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLS 216
++PG+++ DQ+VIKK P+ S ++++SA+ + KD+L GG+ NP EVFCSVPGRLSLLS
Sbjct: 173 DEPGMSLLDQSVIKKVPIP---SKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLS 229
Query: 217 STSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRK 276
STSKYKVTV EVQRRLSPPECLNASLLGGVLRRAKSKNGGR LRE+L+KIGLNLPAGRRK
Sbjct: 230 STSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRK 289
Query: 277 AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATK 336
AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKA AE+L RQH+DP E +RK+MLLA K
Sbjct: 290 AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAK 349
Query: 337 QICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYL 396
QICKEF DL+AQDRSPLGNSRP ILEPG+QSCLTHF+LI+HGFG PA+CAA+TA QNYL
Sbjct: 350 QICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYL 409
Query: 397 TEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 431
E+LK +DKM+LS+ + H K+S+K+ KHRK
Sbjct: 410 LESLKGLDKMFLSSVGSGH--GETKASEKDAKHRK 442
>gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens]
Length = 452
Score = 353 bits (906), Expect = 2e-97
Identities = 230/466 (49%), Positives = 280/466 (60%), Gaps = 72/466 (15%)
Query: 2 LVHSFSAMDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPP 55
LVH A RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF
Sbjct: 8 LVHD--AEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTN 63
Query: 56 YQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ----------- 93
+Q P++ QS + +SH D YSLN LH Q H G P
Sbjct: 64 HQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALK 123
Query: 94 -----RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSL 146
Q +E G L +R H LS + Y H D LL GP S GL L
Sbjct: 124 SSCLDEQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDL 178
Query: 147 PHAIEEVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVF 205
++E G+ + Q VI++G VVNP ++F
Sbjct: 179 QGSVEA-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLF 211
Query: 206 CSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDK 265
CSVPGRLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD+
Sbjct: 212 CSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDR 271
Query: 266 IGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQ 325
+GLNLPAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ
Sbjct: 272 LGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQ 331
Query: 326 VTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAV 385
RK M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+
Sbjct: 332 TARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAI 391
Query: 386 CAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 431
CAA++ Q L+E L ++K N + ++ ++ RK
Sbjct: 392 CAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 40.0 bits (92), Expect = 0.004
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 28 VGQSPYTSAPPLSHTPNADF-QPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQP--- 83
+G S +S P L A F Q P P+ SQ P + P + HA P
Sbjct: 67 LGSSSKSSPPVLQGPAPAGFSQHPGLLVPHTHARDSSQGPCEPLPGPLTQPRAHASPFSG 126
Query: 84 --QPQHPGWPGQRQSQESGL-----LHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSS 136
P P P +S E G + T LPH + G+DP + H PH
Sbjct: 127 ALTPSAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPETSHGGH------PHGNMP 180
Query: 137 GLGDLSIHSLPH----AIEEVPHVEDPGINIPDQ 166
GL PH P + PG+ +P Q
Sbjct: 181 GLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQ 214
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 39 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 84
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 85 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 138
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 139 GDLS 142
GD S
Sbjct: 259 GDSS 262
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 39 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 84
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 85 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 138
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 139 GDLS 142
GD S
Sbjct: 259 GDSS 262
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 38.9 bits (89), Expect = 0.009
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 29 GQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPL--HAQPQPQ 86
G++P P S P +PPY P P +P P + PY P + P P
Sbjct: 289 GRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
Query: 87 HPGWPG 92
P WPG
Sbjct: 349 GPAWPG 354
Score = 28.9 bits (63), Expect = 9.4
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 32 PYTSAP-----PLSH--TPNADF----QPPYFPPPYQPIYPQSQ-DPYSHVNDPYSLNPL 79
PY+ +P P +H P A F QP ++ P P YP +Q P YS +P
Sbjct: 206 PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAG--YSWSPQ 263
Query: 80 HAQ-PQPQHPGWP 91
+ P+P +PG P
Sbjct: 264 RSMPPRPGYPGTP 276
>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
sapiens]
Length = 368
Score = 38.5 bits (88), Expect = 0.012
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 22/170 (12%)
Query: 26 GTVGQSPYTSAPPLSHTPNADF----QPPYFPPPYQPIYPQSQDP---YSHVNDPYSLNP 78
G G P A P H P++ QPP P QP+ P S DP H N S+
Sbjct: 123 GPPGSQPSPHAQPPPHNPSSMMGPHSQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQR 182
Query: 79 LHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGL 138
++ P+ P PG Q+ SG+ L + G++ GP A
Sbjct: 183 MN-PPRGMGPMGPGP-QNYGSGMRPPPNSLGPAMPGIN------------MGPGAGRPWP 228
Query: 139 GDLSIHSLPHAIEEV-PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAI 187
S +S+P++ +V PG P T I P + S+ N + I
Sbjct: 229 NPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMI 278
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 30 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 69
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 113
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 19 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 72
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 73 PYSLNPLHAQPQPQHPGWPGQRQSQES 99
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 30 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 69
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 113
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 19 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 72
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 73 PYSLNPLHAQPQPQHPGWPGQRQSQES 99
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.7 bits (86), Expect = 0.020
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 23 PQLGTVGQSPYTSAP-------PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYS 75
PQ + QSP T P P TP PY PP +P QS+DP++
Sbjct: 2415 PQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP---QSRDPFA------- 2464
Query: 76 LNPLHAQPQPQHP 88
PLH P+PQ P
Sbjct: 2465 --PLHKPPRPQPP 2475
Score = 31.6 bits (70), Expect = 1.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 32 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 91
P APP + + P + PP P PQ S + P S P AQ P HPG P
Sbjct: 4287 PRLPAPPGALSTGPVLGPVHPTPP--PSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTP 4344
Score = 29.3 bits (64), Expect = 7.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 50 PYFPPPYQPIYPQSQDPYSHVN--------DPYSLNPLHAQPQPQHP 88
P PPP Q + P P SH + DPY+ PL +PQP P
Sbjct: 2349 PQEPPPAQALAPS---PPSHPDIFRPGSYTDPYAQPPLTPRPQPPPP 2392
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 23 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 81
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 82 QPQPQHP--GWP 91
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 23 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 81
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 82 QPQPQHP--GWP 91
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 23 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 68
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 205 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 264
Query: 69 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 117
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 265 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 322
Query: 118 R 118
+
Sbjct: 323 Q 323
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 34 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 84
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 423 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 480
Query: 85 PQHPGWPG 92
QHP PG
Sbjct: 481 AQHPFVPG 488
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 23 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 68
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 69 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 117
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 118 R 118
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 34 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 84
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 85 PQHPGWPG 92
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 23 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 68
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 69 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 117
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 118 R 118
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 34 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 84
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 85 PQHPGWPG 92
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 37.4 bits (85), Expect = 0.027
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 5 SFSAMDRHDGTSNGTARLPQLGTVGQSPY-------TSAPPLSHTPNADFQPPYFPPPYQ 57
S +M + +G S G A P G PY PP P A F PP PPP
Sbjct: 446 SLQSMMKTEGPSYG-ALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPP-T 503
Query: 58 PIYPQSQDPY--SHVNDPYSLNPLHAQPQPQHPG 89
P YP Y + P L P HA P PG
Sbjct: 504 PGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPG 537
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 37.0 bits (84), Expect = 0.035
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 17/111 (15%)
Query: 30 QSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVND-----------PYSLNP 78
Q P + PP H N F P + + P +P + PY H D P +P
Sbjct: 531 QHPQFNQPPHPHNFNR-FPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHP 589
Query: 79 LHAQPQP---QHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED 126
H P P +HP W G + H G P + P + H+D
Sbjct: 590 GHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGP--PHINHDD 638
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 36.6 bits (83), Expect = 0.045
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 25 LGTVGQSPYTSAPPLSHT--PNADFQPP------YFPPPYQPIYPQSQDPYSHVNDPYSL 76
L T S + APP P QPP Y+PP YP S Y ++ P +
Sbjct: 486 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQ---YPNSNQQYRPLSHPVAY 542
Query: 77 NPLHAQ--PQP-QHPG----WPGQRQSQESGLL 102
+P Q PQP Q PG P Q+Q+ G++
Sbjct: 543 SPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMI 575
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 35.8 bits (81), Expect = 0.077
Identities = 28/87 (32%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 31 SPYTSAPPLSHTPNADFQPP-YFPPPYQPIYPQS-----QDPYSHVNDPYSLNPLHAQPQ 84
S + PP PP PPP QP PQ P H +DPYS L P
Sbjct: 1005 STHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPS 1064
Query: 85 PQHPGWPGQRQSQESGLLHTHRGLPHQ 111
P P Q Q TH+ P Q
Sbjct: 1065 PLMIHSPQMSQFQSL----THQSPPQQ 1087
Score = 33.9 bits (76), Expect = 0.29
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 18 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP-PYQPIYPQ--SQDPYSHVNDPY 74
GTA+ P + TV + S PP + TP + P P P+ + P Q P V P
Sbjct: 187 GTAK-PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQ 245
Query: 75 SL-NPLHAQPQPQHPGWPGQRQSQ 97
L P PQPQ P P + Q
Sbjct: 246 PLQTPPPVPPQPQPPPAPAPQPVQ 269
Score = 30.8 bits (68), Expect = 2.5
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 22/92 (23%)
Query: 19 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNP 78
T LP + Q P PP H P+ Q PPP P PQ H P P
Sbjct: 942 TPLLPSVKVQSQPP-PPLPPPPH-PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP---RP 996
Query: 79 LHAQP----------------QPQHPGWPGQR 94
+H QP QP HP PGQ+
Sbjct: 997 VHLQPMQFSTHIQQPPPPQGQQPPHPP-PGQQ 1027
Score = 28.9 bits (63), Expect = 9.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 32 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPG 89
P PP P QPP PPP P PQ P + P + +PQ PG
Sbjct: 759 PPPQQPPPPPPPQQQQQPP--PPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPG 814
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 35.8 bits (81), Expect = 0.077
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Query: 21 RLPQLGTVGQS--PYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPYSHVNDPYS 75
R P L GQ P + P L + PP+ P P QP PQ Q P+ + P
Sbjct: 558 RQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQP-- 615
Query: 76 LNPLHAQPQPQH-PGWPGQRQSQESGLLHTHRGLP 109
P QP PQH P P Q Q H H +P
Sbjct: 616 --PPQHQPPPQHPPQHPPQHQHHHH---HHHLSVP 645
Score = 30.4 bits (67), Expect = 3.2
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 48 QPPYFP--PPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 91
QPP P PP P PQ Q P + P L PL P HP P
Sbjct: 312 QPPVVPQAPPPPPPPPQQQ-PIRSLFQPQPLQPLLPVQHPHHPSPP 356
Score = 29.6 bits (65), Expect = 5.5
Identities = 23/86 (26%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Query: 26 GTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQP 85
G VG ++ + P + P+ P P QP P P PLH P
Sbjct: 536 GPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQ-------GPLHPPLPP 588
Query: 86 QHPGWPGQRQSQESGLLHTHRGLPHQ 111
H P Q Q Q PHQ
Sbjct: 589 PHQPQPQQPQQQPPPQHQPPHQPPHQ 614
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 31 SPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGW 90
+P S PP + P A QPP PPP P PQ + Y QPQ Q PG
Sbjct: 12 APPPSQPPQA-PPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPG- 69
Query: 91 PGQRQ 95
GQ+Q
Sbjct: 70 -GQKQ 73
>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
sapiens]
Length = 279
Score = 35.4 bits (80), Expect = 0.10
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 18 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 77
GT RL L V ++ ++P P +P P P D + + P S
Sbjct: 11 GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
Query: 78 PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129
PL + QHP P +ESG+L GLP + SGL R + E + H
Sbjct: 56 PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
>gi|239757254 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 35.0 bits (79), Expect = 0.13
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 38 PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQ 97
P SH P A+ P P+ + +Q P S ++ PY + P+P+ P +
Sbjct: 52 PDSHFPPANSSSQVAPLPF--LLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR 109
Query: 98 ESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLG 139
S H+H Q+S PRR H PH SGLG
Sbjct: 110 ASAHAHSHADDASQVS---PRRVPAVHRLRAPSPHPGVSGLG 148
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 38 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 84
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
Query: 85 PQHPGW 90
P P W
Sbjct: 89 PLRPPW 94
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 38 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 84
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
Query: 85 PQHPGW 90
P P W
Sbjct: 107 PLRPPW 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,475,626
Number of Sequences: 37866
Number of extensions: 1044522
Number of successful extensions: 3750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 3299
Number of HSP's gapped (non-prelim): 527
length of query: 431
length of database: 18,247,518
effective HSP length: 105
effective length of query: 326
effective length of database: 14,271,588
effective search space: 4652537688
effective search space used: 4652537688
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.