Search of human proteins with 71274150

Search of human proteins with 71274150

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71274150 glycolipid transfer protein domain containing 1
[Homo sapiens]
         (214 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71274150 glycolipid transfer protein domain containing 1 [Hom...   429   e-121
gi|62526120 glycolipid transfer protein domain containing 2 [Hom...   124   6e-29
gi|7705684 pleckstrin homology domain containing, family A (phos...    54   1e-07
gi|7705987 glycolipid transfer protein [Homo sapiens]                  42   4e-04
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]      30   1.2  
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]      30   1.2  
gi|115430239 spectrin, beta, non-erythrocytic 4 isoform sigma5 [...    30   1.5  
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    30   1.5  
gi|32171221 GRP1 (general receptor for phosphoinositides 1)-asso...    29   2.6  
gi|50345997 E1A binding protein p300 [Homo sapiens]                    29   3.4  
gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]            29   3.4  
gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]            29   3.4  
gi|40806187 ADAM metallopeptidase with thrombospondin type 1 mot...    29   3.4  
gi|166795301 prenylcysteine oxidase 1 [Homo sapiens]                   28   5.8  
gi|9966791 fascin 3 [Homo sapiens]                                     28   5.8  

>gi|71274150 glycolipid transfer protein domain containing 1 [Homo
           sapiens]
          Length = 214

 Score =  429 bits (1104), Expect = e-121
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   MDDSETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSK 60
           MDDSETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSK
Sbjct: 1   MDDSETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSK 60

Query: 61  LRIMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQL 120
           LRIMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQL
Sbjct: 61  LRIMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQL 120

Query: 121 FLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPP 180
           FLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPP
Sbjct: 121 FLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPP 180

Query: 181 EQAVQMLGEALPFIQRVYNVSQKLYAEHSLLDLP 214
           EQAVQMLGEALPFIQRVYNVSQKLYAEHSLLDLP
Sbjct: 181 EQAVQMLGEALPFIQRVYNVSQKLYAEHSLLDLP 214


>gi|62526120 glycolipid transfer protein domain containing 2 [Homo
           sapiens]
          Length = 291

 Score =  124 bits (311), Expect = 6e-29
 Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 5/202 (2%)

Query: 17  FKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSKLRIMERLRGGPQSEHY 76
           F   L  + +V L PY+A W+ LV FL  LG++F+F +++  +K+  +E    GP +EHY
Sbjct: 89  FHASLKPEGDVGLSPYLAGWRALVEFLTPLGSVFAFATREAFTKVTDLEARVHGPDAEHY 148

Query: 77  RSLQAMVAHELSNRLVD---LERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDAR 133
            SL AM A E    L++      R     SG RT+L LHRAL W QL L  + T      
Sbjct: 149 WSLAAMAAWERRAGLLEQPGAAPRDPTRSSGSRTLLLLHRALRWSQLCLHRVATGALGGP 208

Query: 134 TSAL-CADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPPE-QAVQMLGEAL 191
            + + C+D+Y A+L  +HPW+VR+   +AF   P R   LE    G  E +A   L  A 
Sbjct: 209 EAGVQCSDAYRAALGPHHPWLVRQTARLAFLAFPGRRRLLELACPGATEAEARAALLRAA 268

Query: 192 PFIQRVYNVSQKLYAEHSLLDL 213
             ++ VYN +Q L AE  LL L
Sbjct: 269 GTLEDVYNRTQSLLAERGLLQL 290


>gi|7705684 pleckstrin homology domain containing, family A
           (phosphoinositide binding specific) member 9 [Homo
           sapiens]
          Length = 391

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 23  EKEEVLLDPYIASWKGLVRFLNSLG-TIFSFISKDVVSKLRIMERLRGGPQSEHYRSLQA 81
           E   +  + ++AS   +V  L+ LG T+F+ +  D+V  ++ + + +     E + +LQ 
Sbjct: 210 EDSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQ-KYITNKEEFTTLQK 268

Query: 82  MVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADS 141
           +V HE+   +  +        S    +L L R L +L+ FL  ++   +D +T+    ++
Sbjct: 269 IVLHEVEADVAQVRN------SATEALLWLKRGLKFLKGFLTEVKNGEKDIQTAL--NNA 320

Query: 142 YNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNV 177
           Y  +L  +H WVVR    +A    P+ E F+ A+ V
Sbjct: 321 YGKTLRQHHGWVVRGVFALALRATPSYEDFVAALTV 356


>gi|7705987 glycolipid transfer protein [Homo sapiens]
          Length = 209

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 21  LDEKEEVLLDPYIASWKGLVRFLNSLGT-IFSFISKDVVSKLRIMERLRGGPQSEHYRSL 79
           L   +++   P++ +   L  F + LG+ +F+ I  D+   +  ++ +     ++ +R+L
Sbjct: 12  LPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAK-FRTL 70

Query: 80  QAMVAHELSNRLVDLERRSHHPESGCRTVLR-LHRALHWLQLFLEGLRTSPEDARTSAL- 137
           Q ++  E+   +   E     P+ G    L  L R L ++Q+FL+ +     D     L 
Sbjct: 71  QNIL--EVEKEMYGAE----WPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLI 124

Query: 138 ---CADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVG 178
                 +Y  +L  YH W+V++    A    P +  FL+A++ G
Sbjct: 125 RVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKG 168


>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
          Length = 4363

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 121  FLEGLRTSPEDARTSALCADSYNASLAAYHPWV 153
            FL+ +RTSPE      L  D YN +L+ + P++
Sbjct: 2736 FLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFI 2768


>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
          Length = 4388

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 121  FLEGLRTSPEDARTSALCADSYNASLAAYHPWV 153
            FL+ +RTSPE      L  D YN +L+ + P++
Sbjct: 2736 FLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFI 2768


>gi|115430239 spectrin, beta, non-erythrocytic 4 isoform sigma5
           [Homo sapiens]
          Length = 678

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 29/159 (18%)

Query: 63  IMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHP-------ESGCRTVLR----- 110
           + ERL    Q+E    LQA+  H   N+ +  E ++H P        +G    LR     
Sbjct: 207 VQERLPLAMQTERGNGLQAVQQHIKKNQGLRREIQAHGPRLEEVLERAGALASLRSPEAE 266

Query: 111 -LHRALHWLQLFLEGLRTSPE---DARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLP 166
            + R L  LQ    GLR + E       +A   + Y   +A    W            L 
Sbjct: 267 AVRRGLEQLQSAWAGLREAAERRQQVLDAAFQVEQYYFDVAEVEAW------------LG 314

Query: 167 TREVFLEAMNVGPPEQA-VQMLGEALPFIQRVYNVSQKL 204
            +E+ + + + G  EQ+ +Q+L + L   Q V N  + +
Sbjct: 315 EQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESI 353


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
            sapiens]
          Length = 2564

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 29/159 (18%)

Query: 63   IMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHP-------ESGCRTVLR----- 110
            + ERL    Q+E    LQA+  H   N+ +  E ++H P        +G    LR     
Sbjct: 1531 VQERLPLAMQTERGNGLQAVQQHIKKNQGLRREIQAHGPRLEEVLERAGALASLRSPEAE 1590

Query: 111  -LHRALHWLQLFLEGLRTSPE---DARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLP 166
             + R L  LQ    GLR + E       +A   + Y   +A    W            L 
Sbjct: 1591 AVRRGLEQLQSAWAGLREAAERRQQVLDAAFQVEQYYFDVAEVEAW------------LG 1638

Query: 167  TREVFLEAMNVGPPEQA-VQMLGEALPFIQRVYNVSQKL 204
             +E+ + + + G  EQ+ +Q+L + L   Q V N  + +
Sbjct: 1639 EQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESI 1677


>gi|32171221 GRP1 (general receptor for phosphoinositides
           1)-associated scaffold protein [Homo sapiens]
          Length = 395

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 129 PEDARTSALCADSYNASLAAYHPWVVRRAVTVAFCTLPTRE 169
           P  A T    AD   A+L  YHP  + RA+ V+  TLP R+
Sbjct: 42  PAAAATPGPPADELYAALEDYHPAELYRALAVSGGTLPRRK 82


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 87   LSNRLVDLERRSHHPESGCRTVLRLH 112
            L NR+ D  RR +HPESG  TV  +H
Sbjct: 1302 LENRVNDFLRRQNHPESGEVTVRVVH 1327


>gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 83  VAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDAR---TSALCA 139
           V H++   L+ +E     PE  CR V +     H L   L+ +RT  +D R   TS  C 
Sbjct: 215 VRHQVHETLLVVEPTHSSPEGSCREVPQAASKTHGL---LQAVRTQAQDKRPAVTSQPCP 271

Query: 140 DSYNASL 146
            +   SL
Sbjct: 272 SAATHSL 278


>gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 83  VAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDAR---TSALCA 139
           V H++   L+ +E     PE  CR V +     H L   L+ +RT  +D R   TS  C 
Sbjct: 215 VRHQVHETLLVVEPTHSSPEGSCREVPQAASKTHGL---LQAVRTQAQDKRPAVTSQPCP 271

Query: 140 DSYNASL 146
            +   SL
Sbjct: 272 SAATHSL 278


>gi|40806187 ADAM metallopeptidase with thrombospondin type 1 motif,
           18 preproprotein [Homo sapiens]
          Length = 1221

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 4   SETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSKLRI 63
           S+ G N++ ++V+ K+ +++  +  +  YI +   +V  L   GTI S I+  VVS L +
Sbjct: 289 SQKGLNVETLVVADKKMVEKHGKGNVTTYILTVMNMVSGLFKDGTIGSDINVVVVS-LIL 347

Query: 64  MERLRGGPQSEHY 76
           +E+  GG    H+
Sbjct: 348 LEQEPGGLLINHH 360


>gi|166795301 prenylcysteine oxidase 1 [Homo sapiens]
          Length = 505

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 99  HHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPW 152
           + P   C +++ LH  L+    +L G+  +      SA+ A  +NA+L AYH W
Sbjct: 439 YKPPEKCPSII-LHDRLY----YLNGIECAASAMEMSAIAA--HNAALLAYHRW 485


>gi|9966791 fascin 3 [Homo sapiens]
          Length = 498

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 14/68 (20%)

Query: 96  RRSHHPESGCRTVLRLHRALHW-LQLFLEG--LRTSPEDARTSALCADSYNASLAAYHPW 152
           R SHH   GC  +LR HR   W LQ  + G  L ++ +D      C       L+AYH W
Sbjct: 88  RTSHH---GC-FLLRFHRNSKWTLQCLISGRYLESNGKDV----FCTSHV---LSAYHMW 136

Query: 153 VVRRAVTV 160
             R A+ V
Sbjct: 137 TPRPALHV 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,918,480
Number of Sequences: 37866
Number of extensions: 303682
Number of successful extensions: 624
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 613
Number of HSP's gapped (non-prelim): 15
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.