Guide to the Human Genome
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Search of human proteins with 6912274

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912274 brain-specific membrane-anchored protein precursor
[Homo sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912274 brain-specific membrane-anchored protein precursor [H...   703   0.0  
gi|20070191 thymic dendritic cell-derived factor 1 [Homo sapiens]     156   2e-38
gi|153792110 HEG homolog 1 [Homo sapiens]                              33   0.28 
gi|5454086 sushi-repeat-containing protein, X-linked [Homo sapiens]    33   0.37 
gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo sa...    32   1.1  
gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo sa...    32   1.1  
gi|13994335 Mix-like homeobox protein 1 [Homo sapiens]                 31   1.8  
gi|237820711 lymphocyte antigen 6 complex, locus K isoform 1 [Ho...    30   2.4  
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    30   3.1  
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi...    30   3.1  
gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]                   30   3.1  
gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr...    30   4.1  
gi|157384971 cyclin G associated kinase [Homo sapiens]                 30   4.1  
gi|162461738 guanine nucleotide binding protein, alpha activatin...    30   4.1  
gi|10567816 guanine nucleotide binding protein, alpha activating...    30   4.1  
gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Hom...    29   5.3  
gi|21450721 enkurin [Homo sapiens]                                     29   5.3  
gi|13376888 hole protein [Homo sapiens]                                29   5.3  
gi|226342935 podocan-like 1 isoform 3 [Homo sapiens]                   29   7.0  
gi|226342933 podocan-like 1 isoform 2 [Homo sapiens]                   29   7.0  
gi|226342931 podocan-like 1 isoform 1 [Homo sapiens]                   29   7.0  
gi|19923122 cholinergic receptor, nicotinic, alpha 3 [Homo sapiens]    29   7.0  
gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo ...    28   9.1  
gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo ...    28   9.1  
gi|239740999 PREDICTED: hypothetical protein [Homo sapiens]            28   9.1  

>gi|6912274 brain-specific membrane-anchored protein precursor [Homo
           sapiens]
          Length = 342

 Score =  703 bits (1814), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL 60
           MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL
Sbjct: 1   MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGL 60

Query: 61  EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC 120
           EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC
Sbjct: 61  EGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQAC 120

Query: 121 SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN 180
           SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN
Sbjct: 121 SHGCWSQPAEPEPEQKRKVLEAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDN 180

Query: 181 GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS 240
           GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS
Sbjct: 181 GKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTS 240

Query: 241 SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ 300
           SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ
Sbjct: 241 SKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQ 300

Query: 301 PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL 342
           PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL
Sbjct: 301 PLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL 342


>gi|20070191 thymic dendritic cell-derived factor 1 [Homo sapiens]
          Length = 323

 Score =  156 bits (395), Expect = 2e-38
 Identities = 104/319 (32%), Positives = 160/319 (50%), Gaps = 41/319 (12%)

Query: 7   MPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCR-DRDLGPQPSQAGLEGASE 65
           +PP LLL + LA     S  ++ + F   LGDT +C   C+    L   P +  L     
Sbjct: 16  LPPLLLLTMALAG---GSGTASAEAFDSVLGDTASCHRACQLTYPLHTYPKEEELY---- 68

Query: 66  SPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQACSHGCW 125
                     AC+RGCRLFSIC+FV      N T+ ECE+AC EAY +  EQ AC  GC 
Sbjct: 69  ----------ACQRGCRLFSICQFVDDGIDLNRTKLECESACTEAYSQSDEQYACHLGCQ 118

Query: 126 SQPAEPEPEQKRKVLEAPSGALSL-LDLFSTLCNDLVNSAQGFVSSTWTYYLQTDNGKVV 184
           +Q    E  Q++ +   P   L   L L  +  +D+++SAQ F++S+WT+YLQ D+GK+V
Sbjct: 119 NQLPFAELRQEQLMSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIV 178

Query: 185 VFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPLDKVRKAKIRVKTSSKAK 244
           +FQ++P ++                   +   LE     +      + + ++++ S   +
Sbjct: 179 IFQSKPEIQ-------------------YAPHLEQEPTNLRESSLSKMSYLQMRNSQAHR 219

Query: 245 VESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQPLTL 304
              E+ + + FL C+S  SG   WIL   L LSV+V+LW+ C+T+ TA  Q++  + L++
Sbjct: 220 NFLEDGESDGFLRCLSLNSG---WILTTTLVLSVMVLLWICCATVATAVEQYVPSEKLSI 276

Query: 305 EQHKGFMMEPDWPLYPPPS 323
                FM E     YP  S
Sbjct: 277 YGDLEFMNEQKLNRYPASS 295


>gi|153792110 HEG homolog 1 [Homo sapiens]
          Length = 1381

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 15/77 (19%)

Query: 8  PPPLLLLL--LLASPPAASAPSARDP----------FAPQLGDTQNCQLRCR-DRDLGPQ 54
          PPPLLLLL  LL  PPA  AP  RDP           AP  G     QL  R +R+  P 
Sbjct: 10 PPPLLLLLLPLLLLPPA--APGTRDPPPSPARRALSLAPLAGAGLELQLERRPEREPPPT 67

Query: 55 PSQAGLEGASESPYDRA 71
          P +     A+  P  RA
Sbjct: 68 PPRERRGPATPGPSYRA 84


>gi|5454086 sushi-repeat-containing protein, X-linked [Homo
          sapiens]
          Length = 464

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 3  AVALMPPPLLLLLLLASPPAASAPSARD 30
          A+ L+ PPLLLLLLL  PP+ S P + D
Sbjct: 9  ALLLLLPPLLLLLLLRVPPSRSFPGSGD 36


>gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo
          sapiens]
          Length = 607

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 4/28 (14%)

Query: 8  PPPLLLLL----LLASPPAASAPSARDP 31
          PPPLLLLL    LL +P AA+AP+ R P
Sbjct: 26 PPPLLLLLALLPLLPAPGAAAAPAPRPP 53


>gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo
          sapiens]
          Length = 610

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 4/28 (14%)

Query: 8  PPPLLLLL----LLASPPAASAPSARDP 31
          PPPLLLLL    LL +P AA+AP+ R P
Sbjct: 26 PPPLLLLLALLPLLPAPGAAAAPAPRPP 53


>gi|13994335 Mix-like homeobox protein 1 [Homo sapiens]
          Length = 232

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 15/78 (19%)

Query: 2  AAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLE 61
          A  AL+PPP     LL +PPA   P+    FA  LG           RD GP P      
Sbjct: 25 AGGALLPPPSPAAALLPAPPAGPGPAT---FAGFLG-----------RDPGPAPPPPASL 70

Query: 62 GASESPYDRAVLISACER 79
          G S +P   A   SA +R
Sbjct: 71 G-SPAPPKGAAAPSASQR 87


>gi|237820711 lymphocyte antigen 6 complex, locus K isoform 1 [Homo
           sapiens]
          Length = 165

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 23/108 (21%)

Query: 41  NCQLRCRDRDLGPQPSQAGLEGASESPYDRAVLISACERG----CRLFSICRFVARSSKP 96
           +  L  R RD  P+ SQ   EG      D  V    CER     C+    C++       
Sbjct: 18  DANLTARQRD--PEDSQRTDEG------DNRVWCHVCERENTFECQNPRRCKW------- 62

Query: 97  NATQTECEAACVEAYVKE-AEQQACSHGCWSQPAEPEPEQKRKVLEAP 143
             T+  C  A V+ + +     + CS GC +    P+PE+KR +LE P
Sbjct: 63  --TEPYCVIAAVKIFPRFFMVAKQCSAGCAAME-RPKPEEKRFLLEEP 107


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 27/150 (18%)

Query: 11  LLLLLLLASPPA--ASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLEGASESPY 68
           L L LLLA PP+  A AP A+ P AP     +    RCR            + G  + P+
Sbjct: 24  LRLALLLARPPSGRAGAPEAQGPAAPGTTAPEGGD-RCR--------GYYDVMGQWDPPF 74

Query: 69  DRAVLISACERGCRLFSIC------RFVARSSKPNATQTECEAACVEAYVKEAEQQACSH 122
           +       C  G   +S C      RF          Q+ C      A+V+     A + 
Sbjct: 75  N-------CSSGA--YSFCCGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARAR 125

Query: 123 GCWSQPAEPEPEQKRKVLEAPSGALSLLDL 152
              + P +P  E+    + A  G  +LL L
Sbjct: 126 DT-AAPRDPGRERSHTAVYAVCGVAALLVL 154


>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 492

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 27/150 (18%)

Query: 11  LLLLLLLASPPA--ASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLEGASESPY 68
           L L LLLA PP+  A AP A+ P AP     +    RCR            + G  + P+
Sbjct: 24  LRLALLLARPPSGRAGAPEAQGPAAPGTTAPEGGD-RCR--------GYYDVMGQWDPPF 74

Query: 69  DRAVLISACERGCRLFSIC------RFVARSSKPNATQTECEAACVEAYVKEAEQQACSH 122
           +       C  G   +S C      RF          Q+ C      A+V+     A + 
Sbjct: 75  N-------CSSGA--YSFCCGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARAR 125

Query: 123 GCWSQPAEPEPEQKRKVLEAPSGALSLLDL 152
              + P +P  E+    + A  G  +LL L
Sbjct: 126 DT-AAPRDPGRERSHTAVYAVCGVAALLVL 154


>gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]
          Length = 617

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 256 LSCMSRRSGLPRWILACCLFLSVLVMLWLSCST 288
           + C++ R      I+ C LF  V V+LW  CS+
Sbjct: 1   MRCLAARVNYKTLIIICALFTLVTVLLWNKCSS 33


>gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
          precursor [Homo sapiens]
          Length = 738

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 9  PPLLLLLLLASPPAASA---PSARDPFAPQ 35
          P  LLLL L  PPAASA   P  RDP  P+
Sbjct: 8  PRFLLLLPLLLPPAASASDRPRGRDPVNPE 37


>gi|157384971 cyclin G associated kinase [Homo sapiens]
          Length = 1311

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 12/56 (21%)

Query: 8   PPPLLLL---LLLASP---------PAASAPSARDPFAPQLGDTQNCQLRCRDRDL 51
           PP  LL    LLLASP         P    P+A DPF P L  + N    C + DL
Sbjct: 925 PPEDLLSEDPLLLASPAPPLSVQSTPRGGPPAAADPFGPLLPSSGNNSQPCSNPDL 980


>gi|162461738 guanine nucleotide binding protein, alpha activating
           polypeptide O isoform b [Homo sapiens]
          Length = 354

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 179 DNGKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPL-----DKVRKA 233
           ++GK  + +   I+   GF G  +++ +     +  ++L   V  +  L     DK RKA
Sbjct: 43  ESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKA 102

Query: 234 KIRVKTSSKAKVESEEPQDNDFLSCMSRRSG 264
             ++     +++E  EP   + LS M R  G
Sbjct: 103 DAKMVCDVVSRMEDTEPFSAELLSAMMRLWG 133


>gi|10567816 guanine nucleotide binding protein, alpha activating
           polypeptide O isoform a [Homo sapiens]
          Length = 354

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 179 DNGKVVVFQTQPIVESLGFQGGRLQRVEVTWRGSHPEALEVHVDPVGPL-----DKVRKA 233
           ++GK  + +   I+   GF G  +++ +     +  ++L   V  +  L     DK RKA
Sbjct: 43  ESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKA 102

Query: 234 KIRVKTSSKAKVESEEPQDNDFLSCMSRRSG 264
             ++     +++E  EP   + LS M R  G
Sbjct: 103 DAKMVCDVVSRMEDTEPFSAELLSAMMRLWG 133


>gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Homo
           sapiens]
          Length = 1103

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 16/132 (12%)

Query: 5   ALMPPPLLLLLLLASPPAASA--------PSARDPFAPQLGDTQNCQLRCRDRDLGPQPS 56
           AL   PLLLLLLL  PPA SA        P A DP   +       +L     +  P   
Sbjct: 32  ALPRLPLLLLLLLLQPPALSAVFTVGVLGPWACDPIFSRARPDLAARLAAARLNRDP--- 88

Query: 57  QAGLEGASESPYDRAVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAE 116
             GL G     ++ A+L   C     L ++   +AR S              E   +EA 
Sbjct: 89  --GLAGGPR--FEVALLPEPCRTPGSLGAVSSALARVSGLVGPVNPAACRPAELLAEEAG 144

Query: 117 QQACSHGC-WSQ 127
                 GC W+Q
Sbjct: 145 IALVPWGCPWTQ 156


>gi|21450721 enkurin [Homo sapiens]
          Length = 256

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 228 DKVRKAKIRVKTSSKAKVESEEPQDNDFLSCMSRRSGLP 266
           D ++KAK  +KT   AKVE   P+  DFL   S+   LP
Sbjct: 37  DDMQKAKTAMKTMGPAKVEVPSPK--DFLKKHSKEKTLP 73


>gi|13376888 hole protein [Homo sapiens]
          Length = 319

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 262 RSGLPRWILACCLFLSVLVMLWLSCSTL--VTAPGQHLKFQPLTL 304
           RSGLP W      F   +++L L C  L  V+  G+H+  Q + L
Sbjct: 172 RSGLPLWAEGLTFFYCYMLLLVLPCVALSEVSMQGEHIAPQKMML 216


>gi|226342935 podocan-like 1 isoform 3 [Homo sapiens]
          Length = 421

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 9  PPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46
          P LLLLLLL  PP  +     D   P LG++     + C LRC
Sbjct: 8  PSLLLLLLLPGPPPVA--GLEDAAFPHLGESLQPLPRACPLRC 48


>gi|226342933 podocan-like 1 isoform 2 [Homo sapiens]
          Length = 510

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 9  PPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46
          P LLLLLLL  PP  +     D   P LG++     + C LRC
Sbjct: 8  PSLLLLLLLPGPPPVA--GLEDAAFPHLGESLQPLPRACPLRC 48


>gi|226342931 podocan-like 1 isoform 1 [Homo sapiens]
          Length = 512

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 8/50 (16%)

Query: 2  AAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDT-----QNCQLRC 46
          + +A+ P  LLLLLL   PP A      D   P LG++     + C LRC
Sbjct: 4  SGLAMWPSLLLLLLLPGPPPVA---GLEDAAFPHLGESLQPLPRACPLRC 50


>gi|19923122 cholinergic receptor, nicotinic, alpha 3 [Homo
          sapiens]
          Length = 505

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 4  VALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQN 41
          +AL PP LLLLLLL+  P A A  A      +L +  N
Sbjct: 10 LALSPPRLLLLLLLSLLPVARASEAEHRLFERLFEDYN 47


>gi|239756716 PREDICTED: hypothetical protein XP_002345022 [Homo
           sapiens]
          Length = 208

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 124 CWSQPAEPEPEQKRKVLEAPSGALSLLDL 152
           CWS P     E KRK L AP G  SL  L
Sbjct: 146 CWSHPLRRR-EGKRKTLSAPQGGSSLRTL 173


>gi|239751211 PREDICTED: hypothetical protein XP_002347748 [Homo
           sapiens]
          Length = 208

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 124 CWSQPAEPEPEQKRKVLEAPSGALSLLDL 152
           CWS P     E KRK L AP G  SL  L
Sbjct: 146 CWSHPLRRR-EGKRKTLSAPQGGSSLRTL 173


>gi|239740999 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 19  SPPAASAPSARDPFAPQLGDTQNCQLRCRD 48
           S PA     ARDP AP+ G    C  RCRD
Sbjct: 165 SKPAEPPAPARDP-APRRGRLARCWARCRD 193


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,742,724
Number of Sequences: 37866
Number of extensions: 764504
Number of successful extensions: 2808
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2782
Number of HSP's gapped (non-prelim): 34
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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