Guide to the Human Genome
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Name: TMEM59L Sequence: fasta or formatted (342aa) NCBI GI: 6912274
Description:

brain-specific membrane-anchored protein precursor

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         30           2
 C cysteine            4.4         15           2
 D aspartate           4.4         15           1
 E glutamate           6.4         22           2
 F phenylalanine       3.2         11           1
 G glycine             5.0         17           2
 H histidine           1.8          6           1
 I isoleucine          1.5          5           1
 K lysine              4.7         16           1
 L leucine            12.9         44           7
 M methionine          1.8          6           2
 N asparagine          1.8          6           1
 P proline             9.1         31           3
 Q glutamine           5.8         20           2
 R arginine            5.3         18           2
 S serine              9.1         31           2
 T threonine           4.1         14           1
 V valine              6.7         23           3
 W tryptophan          1.8          6           1
 Y tyrosine            1.8          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   brain-specific membrane-anchored protein precursor [H... 
TMEM59                0.193   thymic dendritic cell-derived factor 1 
HEG1                  0.012   HEG homolog 1 
SRPX                  0.012   sushi-repeat-containing protein, X-linked 
RYK                   0.010   RYK receptor-like tyrosine kinase isoform 2 
RYK                   0.010   RYK receptor-like tyrosine kinase isoform 1 
MIXL1                 0.009   Mix-like homeobox protein 1 
LY6K                  0.007   lymphocyte antigen 6 complex, locus K isoform 1 [Ho...
LOC440829             0.007   PREDICTED: transmembrane protein 46-like 
LOC440829             0.007   PREDICTED: transmembrane protein 46-like 
GLCE                  0.007   D-glucuronyl C5-epimerase 
PLOD3                 0.007   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr...
GAK                   0.007   cyclin G associated kinase 
GNAO1                 0.007   guanine nucleotide binding protein, alpha activatin...
GNAO1                 0.007   guanine nucleotide binding protein, alpha activating...
GUCY2D                0.006   guanylate cyclase 2D, membrane (retina-specific) [Hom...
ENKUR                 0.006   enkurin 
TMEM121               0.006   hole protein 
PODNL1                0.006   podocan-like 1 isoform 3 
PODNL1                0.006   podocan-like 1 isoform 2 
PODNL1                0.006   podocan-like 1 isoform 1 
CHRNA3                0.006   cholinergic receptor, nicotinic, alpha 3 
LOC100291611          0.004   PREDICTED: hypothetical protein XP_002345022 
LOC100290641          0.004   PREDICTED: hypothetical protein XP_002347748 
LOC401934             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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