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Search of human proteins with 66528888
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66528888 Fanconi anemia complementation group D2 isoform b
[Homo sapiens]
(1451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66528888 Fanconi anemia complementation group D2 isoform b [H... 2850 0.0
gi|21361861 Fanconi anemia complementation group D2 isoform a [H... 2802 0.0
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 46 3e-04
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 46 3e-04
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 42 0.003
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 39 0.036
gi|157743245 WD repeat domain 43 [Homo sapiens] 39 0.036
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 38 0.081
gi|38788260 bromodomain PHD finger transcription factor isoform ... 37 0.14
gi|38788274 bromodomain PHD finger transcription factor isoform ... 37 0.14
gi|55956788 nucleolin [Homo sapiens] 37 0.18
gi|55741677 SET domain containing 1A [Homo sapiens] 37 0.18
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 37 0.18
gi|42740903 MTERF domain containing 2 [Homo sapiens] 36 0.24
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 36 0.24
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 36 0.24
gi|115529449 upstream binding transcription factor, RNA polymera... 36 0.24
gi|115529451 upstream binding transcription factor, RNA polymera... 36 0.24
gi|7657671 upstream binding transcription factor, RNA polymerase... 36 0.24
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 36 0.31
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 36 0.31
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 35 0.40
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 35 0.40
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 35 0.40
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens] 35 0.40
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens] 35 0.40
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 35 0.53
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 35 0.53
gi|18093112 ABT1-associated protein [Homo sapiens] 35 0.53
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 35 0.53
>gi|66528888 Fanconi anemia complementation group D2 isoform b [Homo
sapiens]
Length = 1451
Score = 2850 bits (7387), Expect = 0.0
Identities = 1451/1451 (100%), Positives = 1451/1451 (100%)
Query: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK
Sbjct: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
Query: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL
Sbjct: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
Query: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL
Sbjct: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
Query: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS
Sbjct: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
Query: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE
Sbjct: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
Query: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI
Sbjct: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
Query: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST
Sbjct: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
Query: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH
Sbjct: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
Query: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA
Sbjct: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
Query: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA
Sbjct: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
Query: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF
Sbjct: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
Query: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES
Sbjct: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
Query: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS
Sbjct: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
Query: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL
Sbjct: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
Query: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR
Sbjct: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
Query: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL
Sbjct: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
Query: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL
Sbjct: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
Query: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ
Sbjct: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
Query: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV
Sbjct: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
Query: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI
Sbjct: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
Query: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI
Sbjct: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
Query: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH
Sbjct: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
Query: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC
Sbjct: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
Query: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKE 1440
REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKE
Sbjct: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKE 1440
Query: 1441 QDSDESYDDSD 1451
QDSDESYDDSD
Sbjct: 1441 QDSDESYDDSD 1451
>gi|21361861 Fanconi anemia complementation group D2 isoform a [Homo
sapiens]
Length = 1471
Score = 2802 bits (7263), Expect = 0.0
Identities = 1428/1437 (99%), Positives = 1431/1437 (99%)
Query: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK
Sbjct: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
Query: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL
Sbjct: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
Query: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL
Sbjct: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
Query: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS
Sbjct: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
Query: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE
Sbjct: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
Query: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI
Sbjct: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
Query: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST
Sbjct: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
Query: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH
Sbjct: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
Query: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA
Sbjct: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
Query: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA
Sbjct: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
Query: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF
Sbjct: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
Query: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES
Sbjct: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
Query: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS
Sbjct: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
Query: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL
Sbjct: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
Query: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR
Sbjct: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
Query: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL
Sbjct: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
Query: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL
Sbjct: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
Query: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ
Sbjct: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
Query: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV
Sbjct: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
Query: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI
Sbjct: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
Query: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI
Sbjct: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
Query: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH
Sbjct: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
Query: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC
Sbjct: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
Query: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAG 1437
REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATE ++ +G
Sbjct: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESG 1437
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 45.8 bits (107), Expect = 3e-04
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 1362 KTLELLVCRVKAMLTLNNCREAFW-----LGNLKNRDLQGEEIKSQNSQESTADESEDDM 1416
K+L+L C V + LN+ +E+ + L L D + +E ++Q D+ E+D
Sbjct: 136 KSLDLFNCEV---INLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDE 192
Query: 1417 SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ K EDGEE+E+ E E + E DD D
Sbjct: 193 EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
Score = 33.1 bits (74), Expect = 2.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1390 KNRDLQGEEIK---SQNSQESTADESED---DMSSQASKSKATEDGEEDEVSAGEKEQDS 1443
+ D +GE+ K +++ +E DE ED D+ K + +E+ EE + E ++D
Sbjct: 188 EEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDE 247
Query: 1444 DESYDDSD 1451
DE ++ +
Sbjct: 248 DEDEEEEE 255
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 45.8 bits (107), Expect = 3e-04
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 1362 KTLELLVCRVKAMLTLNNCREAFW-----LGNLKNRDLQGEEIKSQNSQESTADESEDDM 1416
K+L+L C V + LN+ +E+ + L L D + +E ++Q D+ E+D
Sbjct: 136 KSLDLFNCEV---INLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDE 192
Query: 1417 SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ K EDGEE+E+ E E + E DD D
Sbjct: 193 EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
Score = 33.1 bits (74), Expect = 2.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1390 KNRDLQGEEIK---SQNSQESTADESED---DMSSQASKSKATEDGEEDEVSAGEKEQDS 1443
+ D +GE+ K +++ +E DE ED D+ K + +E+ EE + E ++D
Sbjct: 188 EEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDE 247
Query: 1444 DESYDDSD 1451
DE ++ +
Sbjct: 248 DEDEEEEE 255
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 42.4 bits (98), Expect = 0.003
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 1362 KTLELLVCRVKAMLTLNNCREAFW-----LGNLKNRDLQGEEIKSQNSQESTADESEDDM 1416
K+L+L C V LN+ RE+ + L L D + +E +++ DE E+D
Sbjct: 116 KSLDLFNCEVT---NLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDE 172
Query: 1417 SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ + + EDGEE+E + E + E +D D
Sbjct: 173 EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDD 207
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 38.9 bits (89), Expect = 0.036
Identities = 88/488 (18%), Positives = 189/488 (38%), Gaps = 86/488 (17%)
Query: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
Query: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
Query: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
Query: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICN----- 658
T L+++ S C Q + Y+ F ++++ + + V T+ +
Sbjct: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLRR---NSQLANSVMQTLLSQLKQF 634
Query: 659 -----DFQDAFVVDSCVVPEGD---FPFPVKAL-------------------YGLEEYDT 691
D +++C++ +GD P+ L G EE +
Sbjct: 635 YEPKPDLLPPLKLEACILTQGDKISLQEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEE 694
Query: 692 QDGIAINLLPLLFS----------QDFAKDGGPVTSQESGQKLVSPLCLAPYFRLLRLCV 741
++ +L +L S +DF D SQ + + + +C + + +
Sbjct: 695 EEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLI 754
Query: 742 ERQHN------GNLEEIDGLLDCPIFLTDL--EPGEKLESMSAKERS-------FMCSL- 785
E + E+I L C L+D+ E K ++ A + S F+ SL
Sbjct: 755 EYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
Query: 786 --IFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNF 843
+F L W + +E+ + KGK ++ ++ L+ + + + AV Y P + F
Sbjct: 815 TALFRVLLWRYTSIPTSVEESGKKEKGKSIS----LLCLEGLQKIFSAVQQFYQPKIQQF 870
Query: 844 DVETLDIT 851
+ LD+T
Sbjct: 871 -LRALDVT 877
>gi|157743245 WD repeat domain 43 [Homo sapiens]
Length = 677
Score = 38.9 bits (89), Expect = 0.036
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 1357 VPLLKKTLELLVCRVKAMLTLNNCREAFWL--------GNLKNRDLQGEEIKSQNSQEST 1408
VP L +L+ RVK L++ L K G++ K +ES+
Sbjct: 545 VPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYEEESS 604
Query: 1409 ADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ES+D+++ + S+ ED EE E EK++D +E +D++
Sbjct: 605 EEESDDEIADKDSEDNWDEDEEESE---SEKDEDVEEEDEDAE 644
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 37.7 bits (86), Expect = 0.081
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1040 ENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQPENQNLLYSALHVLSSRLK 1099
E G++ PG ++ I + C + + + G F W Q + +LL +L
Sbjct: 359 ETEGLLRIPGAAIR---IKNLCQELEAKFYEGTFNWESVKQHDAASLL---------KLF 406
Query: 1100 QGEHSQPLEELLSQSVHYLQNFH--QSIPSFQCALYLIRLLMVILEKSTASAQNKEKIAS 1157
E QPL SV YL+ F Q++P+ + L + LL+++L + N++ + +
Sbjct: 407 IRELPQPL-----LSVEYLKAFQAVQNLPTKKQQLQALNLLVILLPDA-----NRDTLKA 456
Query: 1158 LARQFLCRVWPSGDKEKSNISN 1179
L +FL RV + +K K + N
Sbjct: 457 LL-EFLQRVIDNKEKNKMTVMN 477
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 37.0 bits (84), Expect = 0.14
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 1398 EIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
E + + +E E E++ A +++ +ED EEDE+ + + D E +D D
Sbjct: 130 ESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 37.0 bits (84), Expect = 0.14
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 1398 EIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
E + + +E E E++ A +++ +ED EEDE+ + + D E +D D
Sbjct: 130 ESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 36.6 bits (83), Expect = 0.18
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 1402 QNSQESTADESEDDMSSQASKSKATEDGEEDEVS-----------AGEKEQDSDESYDDS 1450
+N+++ +DE EDD S + + ED +EDE+ A E E D D+ D+
Sbjct: 138 KNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDED 197
Query: 1451 D 1451
D
Sbjct: 198 D 198
Score = 33.9 bits (76), Expect = 1.2
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 1388 NLKNRDLQGEEIKSQNSQEST---ADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSD 1444
N K D EE E DE ED++ A K+ A EDE + E D D
Sbjct: 139 NAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDE----DDEDDED 194
Query: 1445 ESYDDSD 1451
+ DD D
Sbjct: 195 DEDDDDD 201
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 36.6 bits (83), Expect = 0.18
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDES----YD 1448
D +GEE ++S E ++ E+D + + +E EVS GE E+ S Y
Sbjct: 962 DSEGEEASQESSSEKDEEDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYA 1021
Query: 1449 DSD 1451
DSD
Sbjct: 1022 DSD 1024
Score = 31.2 bits (69), Expect = 7.6
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKSK--ATEDGEEDEVSAGEKEQDSDESYDDS 1450
D EE +E+ + ED+ S +SK A DGE D S E S S S
Sbjct: 987 DEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSS 1046
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 36.6 bits (83), Expect = 0.18
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 1386 LGNLKNRDLQGEEIKSQNSQ--ESTADESEDDMSSQAS---KSKATEDGEEDEVSAGE-- 1438
L L + + EE++ + Q E ++ D++ ++ + ++K+TED EE+E E
Sbjct: 1030 LDGLAKEEEKKEEMEEEKKQVKEEAKEQCGDELVAEPADPEEAKSTEDQEENEEDKEEEE 1089
Query: 1439 KEQDSDESYDDSD 1451
KE+DS+E DD+D
Sbjct: 1090 KEEDSEEEEDDAD 1102
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 36.2 bits (82), Expect = 0.24
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 1358 PLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMS 1417
PLLK L + A + E L R+ + E + + + ++ DE EDD
Sbjct: 288 PLLKDILRVSEAEFLARTACTSVEEFQVFKKLLAREEEESESSTSDDKRASLDEDEDDDD 347
Query: 1418 SQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ + ++ ++DE ++ D DE D+ +
Sbjct: 348 EEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 36.2 bits (82), Expect = 0.24
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 1390 KNRDLQGEEIKSQNSQESTADESEDDMSSQASKS----KATEDGEEDEVSAGEKEQDSDE 1445
K D +GEE + +E D E+D + ++S +A ED E+D+V +++ D D+
Sbjct: 50 KEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 36.2 bits (82), Expect = 0.24
Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
Query: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
Query: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
Query: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQ 640
T L+++ S C Q + Y+ F ++++
Sbjct: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLR 614
>gi|115529449 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 36.2 bits (82), Expect = 0.24
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1394 LQGEEIKSQNSQESTADESEDDMSSQASKSKATEDG-------EEDEVSAGEKEQDSDES 1446
LQ + ++ +E DE ED+ ++EDG EDE G++ ++ DE
Sbjct: 634 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Query: 1447 YDDSD 1451
DD +
Sbjct: 694 EDDDE 698
Score = 34.7 bits (78), Expect = 0.69
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDM-SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
D E+ + + D SED SS++S +EDG+E+E +++ D D+ D+ +
Sbjct: 647 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 706
>gi|115529451 upstream binding transcription factor, RNA polymerase I
isoform b [Homo sapiens]
Length = 727
Score = 36.2 bits (82), Expect = 0.24
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1394 LQGEEIKSQNSQESTADESEDDMSSQASKSKATEDG-------EEDEVSAGEKEQDSDES 1446
LQ + ++ +E DE ED+ ++EDG EDE G++ ++ DE
Sbjct: 634 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Query: 1447 YDDSD 1451
DD +
Sbjct: 694 EDDDE 698
Score = 34.7 bits (78), Expect = 0.69
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDM-SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
D E+ + + D SED SS++S +EDG+E+E +++ D D+ D+ +
Sbjct: 647 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 706
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 36.2 bits (82), Expect = 0.24
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1394 LQGEEIKSQNSQESTADESEDDMSSQASKSKATEDG-------EEDEVSAGEKEQDSDES 1446
LQ + ++ +E DE ED+ ++EDG EDE G++ ++ DE
Sbjct: 671 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 730
Query: 1447 YDDSD 1451
DD +
Sbjct: 731 EDDDE 735
Score = 34.7 bits (78), Expect = 0.69
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDM-SSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
D E+ + + D SED SS++S +EDG+E+E +++ D D+ D+ +
Sbjct: 684 DEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDN 743
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 35.8 bits (81), Expect = 0.31
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 1390 KNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDD 1449
K +D+Q + ++ ++QE + + SE+ + ED E+D+ + + D DE +D
Sbjct: 223 KQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDED 282
Query: 1450 SD 1451
+
Sbjct: 283 EE 284
Score = 31.2 bits (69), Expect = 7.6
Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 21/175 (12%)
Query: 1295 LKYGRLFVEAFLKQCMPLLDFSFRKHRED-VLSLLETFQL-----DTRLLHHLCGHSKIH 1348
L GR F +Q D +HRED V+ + + + T LH G ++
Sbjct: 99 LANGRHFTRQLARQ---QADKKKEEHREDKVIPVTRSLRARNIVQSTEHLHEDNGDVEVR 155
Query: 1349 QDTRLTQHVP----------LLKKTLELLVCRVKAMLTLNN--CREAFWLGNLKNRDLQG 1396
+ R+ L+ T E ++ ++ M + RE LG +
Sbjct: 156 RSCRIRSRYSGVNQSMLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEESN 215
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+ ++ Q+ E+ +Q +++E+GE+ E +++D ++ DD D
Sbjct: 216 LNMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDD 270
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 35.8 bits (81), Expect = 0.31
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
+E S +E AD+ EDD+ + ++ + +G E+E + E++ +E +D D
Sbjct: 24 DECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDEDLEEEEEEEEEDDD 78
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 35.4 bits (80), Expect = 0.40
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKS----KATEDGEEDEVSAGEKEQDSDE 1445
D +GEE + +E D E+D + ++S +A ED E+D+V +++ D D+
Sbjct: 53 DEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 35.4 bits (80), Expect = 0.40
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKS----KATEDGEEDEVSAGEKEQDSDE 1445
D +GEE + +E D E+D + ++S +A ED E+D+V +++ D D+
Sbjct: 53 DEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 35.4 bits (80), Expect = 0.40
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKS----KATEDGEEDEVSAGEKEQDSDE 1445
D +GEE + +E D E+D + ++S +A ED E+D+V +++ D D+
Sbjct: 53 DEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
Length = 981
Score = 35.4 bits (80), Expect = 0.40
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDS 1450
EE + + +ES E EDD++S S+S E+GE+ + ++Q + +DDS
Sbjct: 926 EEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLE--WDDS 977
Score = 30.8 bits (68), Expect = 9.9
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1403 NSQESTADESEDDMSSQASKSKATEDG-EEDEVSAGEKEQDSDESYDDSD 1451
N E+ D+ + + + + +EDG EED++++ E E +E + D
Sbjct: 913 NPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGD 962
>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
Length = 971
Score = 35.4 bits (80), Expect = 0.40
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDS 1450
EE + + +ES E EDD++S S+S E+GE+ + ++Q + +DDS
Sbjct: 916 EEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLE--WDDS 967
Score = 30.8 bits (68), Expect = 9.9
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1403 NSQESTADESEDDMSSQASKSKATEDG-EEDEVSAGEKEQDSDESYDDSD 1451
N E+ D+ + + + + +EDG EED++++ E E +E + D
Sbjct: 903 NPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGD 952
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 35.0 bits (79), Expect = 0.53
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDE 1445
EE + + +E +E E+D + ++ K E+ EE+E + GEKE+ +E
Sbjct: 1877 EEDEEEEGEEEDEEEKEED-EEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 35.0 bits (79), Expect = 0.53
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1397 EEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDE 1445
EE + + +E +E E+D + ++ K E+ EE+E + GEKE+ +E
Sbjct: 1877 EEDEEEEGEEEDEEEKEED-EEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 35.0 bits (79), Expect = 0.53
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1387 GNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDES 1446
G + ++D E+ +S S+ + +ESE++++S S + E+DE ++E+D DE
Sbjct: 231 GEMCDKDALEEDSESV-SEIGSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDED 289
Query: 1447 YDDSD 1451
+D D
Sbjct: 290 SEDDD 294
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 35.0 bits (79), Expect = 0.53
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 1391 NRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESY 1447
N ++ EE K+++ E+ +E EDD +A + + E+ EEDE E++ E Y
Sbjct: 515 NIKVEAEEEKAKSGDETNKEEDEDD--EEAEEEEEEEEEEEDEDDDDNNEEEEFECY 569
Score = 31.6 bits (70), Expect = 5.8
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 1411 ESEDDMSSQASKSKATEDGEEDEVSAGEKEQDSDESYDDSD 1451
E+E++ + ++ ED +++E E+E++ +E DD D
Sbjct: 519 EAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDD 559
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,525,229
Number of Sequences: 37866
Number of extensions: 2261740
Number of successful extensions: 11397
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 9700
Number of HSP's gapped (non-prelim): 1393
length of query: 1451
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1336
effective length of database: 13,892,928
effective search space: 18560951808
effective search space used: 18560951808
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.