Guide to the Human Genome
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Name: UBE2U Sequence: fasta or formatted (226aa) NCBI GI: 22749027
Description:

ubiquitin-conjugating enzyme E2U (putative)

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          8           2
 C cysteine            1.3          3           1
 D aspartate           5.3         12           2
 E glutamate           6.2         14           1
 F phenylalanine       4.0          9           1
 G glycine             2.7          6           1
 H histidine           2.7          6           1
 I isoleucine          5.8         13           1
 K lysine              7.5         17           2
 L leucine            11.1         25           3
 M methionine          2.7          6           2
 N asparagine          6.2         14           2
 P proline             7.1         16           2
 Q glutamine           4.9         11           1
 R arginine            4.4         10           1
 S serine              5.3         12           2
 T threonine           6.2         14           2
 V valine              5.3         12           2
 W tryptophan          2.7          6           1
 Y tyrosine            5.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2U (putative) 
UBE2D2                0.151   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.147   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2C                 0.144   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2D3                0.144   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2A                 0.142   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2C                 0.140   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.140   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2B                 0.138   ubiquitin-conjugating enzyme E2B 
UBE2D4                0.133   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D1                0.133   ubiquitin-conjugating enzyme E2D 1 
UBE2G1                0.124   ubiquitin-conjugating enzyme E2G 1 
UBE2D2                0.122   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2I                 0.113   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.113   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.113   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.113   ubiquitin-conjugating enzyme E2I 
CDC34                 0.102   ubiquitin-conjugating enzyme Cdc34 
UBE2C                 0.100   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2R2                0.100   ubiquitin-conjugating enzyme UBC3B 
UBE2G2                0.100   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2N                 0.093   ubiquitin-conjugating enzyme E2N 
UBE2K                 0.093   ubiquitin-conjugating enzyme E2K isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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