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Search of human proteins with 63252868
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
(597 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s... 1217 0.0
gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo s... 1207 0.0
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 1177 0.0
gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo sa... 1167 0.0
gi|188528698 erlectin isoform 3 [Homo sapiens] 96 9e-20
gi|188528696 erlectin isoform 2 [Homo sapiens] 96 9e-20
gi|20070264 erlectin isoform 1 [Homo sapiens] 96 9e-20
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 56 8e-08
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 56 8e-08
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 56 8e-08
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 56 1e-07
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 53 9e-07
gi|55956788 nucleolin [Homo sapiens] 52 2e-06
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 52 2e-06
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 52 2e-06
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 51 3e-06
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 50 5e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 50 5e-06
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 50 8e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 49 1e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 49 1e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 49 1e-05
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 49 1e-05
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 49 1e-05
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 49 2e-05
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 49 2e-05
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 49 2e-05
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 47 4e-05
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 47 4e-05
>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
Length = 597
Score = 1217 bits (3150), Expect = 0.0
Identities = 597/597 (100%), Positives = 597/597 (100%)
Query: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
Query: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS 480
EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS 480
Query: 481 TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWL 540
TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWL
Sbjct: 481 TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWL 540
Query: 541 TDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF 597
TDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF
Sbjct: 541 TDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF 597
>gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo
sapiens]
Length = 612
Score = 1207 bits (3124), Expect = 0.0
Identities = 597/612 (97%), Positives = 597/612 (97%), Gaps = 15/612 (2%)
Query: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
Query: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDGL 465
EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS ETEKELDPDGL
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL 480
Query: 466 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI 525
KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
Sbjct: 481 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI 540
Query: 526 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG 585
VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
Sbjct: 541 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG 600
Query: 586 GEGTGDLDEFDF 597
GEGTGDLDEFDF
Sbjct: 601 GEGTGDLDEFDF 612
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 1177 bits (3044), Expect = 0.0
Identities = 588/652 (90%), Positives = 594/652 (91%), Gaps = 55/652 (8%)
Query: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
Query: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS 480
EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTS 480
Query: 481 TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT-----GKIEIKIVR-------- 527
TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT ++ +++ +
Sbjct: 481 TLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEHRVRVRVTKLRLGGPNQ 540
Query: 528 ------------------------------------------PWAEGTEEGARWLTDEDT 545
PWAEGTEEGARWLTDEDT
Sbjct: 541 DLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRPWAEGTEEGARWLTDEDT 600
Query: 546 RNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF 597
RNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF
Sbjct: 601 RNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFDF 652
>gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo
sapiens]
Length = 667
Score = 1167 bits (3018), Expect = 0.0
Identities = 588/667 (88%), Positives = 594/667 (89%), Gaps = 70/667 (10%)
Query: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
Sbjct: 1 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV 60
Query: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
Sbjct: 61 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY 120
Query: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
Sbjct: 121 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK 180
Query: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
Sbjct: 181 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA 240
Query: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
Sbjct: 241 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS 300
Query: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
Sbjct: 301 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR 360
Query: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
Sbjct: 361 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED 420
Query: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS---------------ETEKELDPDGL 465
EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS ETEKELDPDGL
Sbjct: 421 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL 480
Query: 466 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT-----GK 520
KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT +
Sbjct: 481 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEHR 540
Query: 521 IEIKIVR--------------------------------------------------PWA 530
+ +++ + PWA
Sbjct: 541 VRVRVTKLRLGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRPWA 600
Query: 531 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG 590
EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG
Sbjct: 601 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG 660
Query: 591 DLDEFDF 597
DLDEFDF
Sbjct: 661 DLDEFDF 667
>gi|188528698 erlectin isoform 3 [Homo sapiens]
Length = 429
Score = 95.9 bits (237), Expect = 9e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
E +C Y + I TP LC HP R
Sbjct: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
Score = 74.3 bits (181), Expect = 3e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 297 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 350
Query: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 351 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 409
Query: 225 PRLC 228
P +C
Sbjct: 410 PVIC 413
>gi|188528696 erlectin isoform 2 [Homo sapiens]
Length = 457
Score = 95.9 bits (237), Expect = 9e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
E +C Y + I TP LC HP R
Sbjct: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
Score = 57.4 bits (137), Expect = 4e-08
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 176
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 177 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC 228
+ +C + P V L EP SC Y+L + +P +C
Sbjct: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVESPVIC 441
>gi|20070264 erlectin isoform 1 [Homo sapiens]
Length = 483
Score = 95.9 bits (237), Expect = 9e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
Query: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
Query: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
Query: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
E +C Y + I TP LC HP R
Sbjct: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
Score = 74.3 bits (181), Expect = 3e-13
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYH----- 171
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH
Sbjct: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
Query: 172 -------SQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRT 224
S YGNG CD+ +PR+ V+ C E + + EP SC Y+L + +
Sbjct: 405 TQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML-EPHSCQYILGVES 463
Query: 225 PRLC 228
P +C
Sbjct: 464 PVIC 467
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 56.2 bits (134), Expect = 8e-08
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 385 QEQPVDDAAEVPQREPEKERGDPER-QREMEEEEDEDEDEDEDEDER-QLLGEFEKELEG 442
+E+ +D E + E E E G PE + E EEEE+EDEDEDEDEDE LGE E+E+
Sbjct: 159 EEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 218
Query: 443 ILLPSDRDRLRSETEKELDPDGLKKESERD 472
L ++ E + E D D +E E +
Sbjct: 219 SYL------MKEEIQDEEDDDDYVEEGEEE 242
Score = 37.0 bits (84), Expect = 0.052
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)
Query: 316 NEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGG 375
++ +++AP EE E+ D E + P + + + D +E
Sbjct: 149 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 208
Query: 376 TKKGKPNIG----------QEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDE 425
+G+ +G E+ DD E + E E+E G ++ + ED+ E+ED+
Sbjct: 209 LGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 268
Score = 34.3 bits (77), Expect = 0.33
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 412 EMEEEEDEDEDEDEDEDERQLLG--------EFEKELEGILLPSDRDRLRSET---EKEL 460
+ EEE+DED DED++E+E G E E+E E D D SE E+E+
Sbjct: 157 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV 216
Query: 461 DPDGLKKESERD 472
L KE +D
Sbjct: 217 GLSYLMKEEIQD 228
Score = 31.2 bits (69), Expect = 2.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 401 EKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKEL 460
+++ P+ + E +E+ DED++E+E+ + G E+E E D D E EL
Sbjct: 150 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 209
Score = 30.8 bits (68), Expect = 3.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 406 DPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGL 465
D E + EE++DED DED++E E E P + E E+E D D
Sbjct: 149 DQEDNEAPDSEEEDDEDGDEDDEE---------EEENEAGPPEGYEEEEEEEEEEDEDED 199
Query: 466 KKESE 470
+ E E
Sbjct: 200 EDEDE 204
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 56.2 bits (134), Expect = 8e-08
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 385 QEQPVDDAAEVPQREPEKERGDPER-QREMEEEEDEDEDEDEDEDER-QLLGEFEKELEG 442
+E+ +D E + E E E G PE + E EEEE+EDEDEDEDEDE LGE E+E+
Sbjct: 118 EEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 177
Query: 443 ILLPSDRDRLRSETEKELDPDGLKKESERD 472
L ++ E + E D D +E E +
Sbjct: 178 SYL------MKEEIQDEEDDDDYVEEGEEE 201
Score = 37.0 bits (84), Expect = 0.052
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)
Query: 316 NEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGG 375
++ +++AP EE E+ D E + P + + + D +E
Sbjct: 108 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 167
Query: 376 TKKGKPNIG----------QEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDE 425
+G+ +G E+ DD E + E E+E G ++ + ED+ E+ED+
Sbjct: 168 LGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 227
Score = 34.3 bits (77), Expect = 0.33
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 412 EMEEEEDEDEDEDEDEDERQLLG--------EFEKELEGILLPSDRDRLRSET---EKEL 460
+ EEE+DED DED++E+E G E E+E E D D SE E+E+
Sbjct: 116 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV 175
Query: 461 DPDGLKKESERD 472
L KE +D
Sbjct: 176 GLSYLMKEEIQD 187
Score = 31.2 bits (69), Expect = 2.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 401 EKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKEL 460
+++ P+ + E +E+ DED++E+E+ + G E+E E D D E EL
Sbjct: 109 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 168
Score = 30.8 bits (68), Expect = 3.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 406 DPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGL 465
D E + EE++DED DED++E E E P + E E+E D D
Sbjct: 108 DQEDNEAPDSEEEDDEDGDEDDEE---------EEENEAGPPEGYEEEEEEEEEEDEDED 158
Query: 466 KKESE 470
+ E E
Sbjct: 159 EDEDE 163
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 56.2 bits (134), Expect = 8e-08
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 385 QEQPVDDAAEVPQREPEKERGDPER-QREMEEEEDEDEDEDEDEDER-QLLGEFEKELEG 442
+E+ +D E + E E E G PE + E EEEE+EDEDEDEDEDE LGE E+E+
Sbjct: 111 EEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGL 170
Query: 443 ILLPSDRDRLRSETEKELDPDGLKKESERD 472
L ++ E + E D D +E E +
Sbjct: 171 SYL------MKEEIQDEEDDDDYVEEGEEE 194
Score = 37.0 bits (84), Expect = 0.052
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)
Query: 316 NEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGG 375
++ +++AP EE E+ D E + P + + + D +E
Sbjct: 101 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 160
Query: 376 TKKGKPNIG----------QEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDE 425
+G+ +G E+ DD E + E E+E G ++ + ED+ E+ED+
Sbjct: 161 LGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 220
Score = 34.3 bits (77), Expect = 0.33
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 412 EMEEEEDEDEDEDEDEDERQLLG--------EFEKELEGILLPSDRDRLRSET---EKEL 460
+ EEE+DED DED++E+E G E E+E E D D SE E+E+
Sbjct: 109 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEV 168
Query: 461 DPDGLKKESERD 472
L KE +D
Sbjct: 169 GLSYLMKEEIQD 180
Score = 31.2 bits (69), Expect = 2.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 401 EKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKEL 460
+++ P+ + E +E+ DED++E+E+ + G E+E E D D E EL
Sbjct: 102 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 161
Score = 30.8 bits (68), Expect = 3.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 406 DPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGL 465
D E + EE++DED DED++E E E P + E E+E D D
Sbjct: 101 DQEDNEAPDSEEEDDEDGDEDDEE---------EEENEAGPPEGYEEEEEEEEEEDEDED 151
Query: 466 KKESE 470
+ E E
Sbjct: 152 EDEDE 156
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 317 EPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGT 376
E E Q GE P E +PEA A + Q V P +E++G T
Sbjct: 1983 EVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESD-GVEAQPKSEGEEAQEVEGET 2041
Query: 377 KKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEF 436
+K + G QP D E P+ E E + E + E++E E E E ED D ++ GE
Sbjct: 2042 QKTE---GDAQPESDGVEAPEAEEEAQ----EAEGEVQEAEGEAHPESEDVDAQEAEGEA 2094
Query: 437 EKELEGILLPSDRDRLRS-------ETEKELDPD 463
+ E EG+ P + ETE E P+
Sbjct: 2095 QPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPE 2128
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/284 (25%), Positives = 112/284 (39%), Gaps = 50/284 (17%)
Query: 274 EELQDLGPQVWSETKS-GVAPQKMAGASP-TKDDSKDSDFWKMLNEPEDQAPGGE-EVPA 330
EE Q V ++ KS G Q++ G + T+ D++ E E++A E EV
Sbjct: 2014 EEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQE 2073
Query: 331 EEQDPSPEAAD----SASGAPNDFQNNVQVKVIRSPADLIRFIE--ELKGGTKKGKPNI- 383
E + PE+ D A G V+ A IE E +G + I
Sbjct: 2074 AEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIE 2133
Query: 384 -----GQEQPVDDAAEVPQRE----PEKE-----RGDPERQREME-----EEEDEDEDED 424
G+ QP + E E PE E + E Q E+E E E E + E
Sbjct: 2134 APEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPES 2193
Query: 425 EDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLK-KESERDRAMLALTSTLN 483
E + + GE + ELEG+ P +E E + +P+G++ E+E + + T
Sbjct: 2194 EGIEAPEAEGEAQPELEGVEAP------EAEEEAQPEPEGVETPEAEGEAQPESEGETQG 2247
Query: 484 KLIKRLEEKQSPEL-------VKKHKKKRVVPK-KPPPSPQPTG 519
E+K SP++ + + VP+ +P P P P G
Sbjct: 2248 ------EKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGG 2285
Score = 38.1 bits (87), Expect = 0.023
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 12/201 (5%)
Query: 288 KSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAP 347
+ G+ P G P D+ +D + + LN +D G E A Q+ + +S + A
Sbjct: 1727 EGGLGPGLSQG--PGVDEGEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAG 1784
Query: 348 NDFQNNVQV-----KVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQRE--- 399
++ Q + + + L+G G + + E P+ E
Sbjct: 1785 SELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEA 1844
Query: 400 -PEKERGD-PERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETE 457
PE E + PE + + +E E E + E ED + + GE + E E + P ++ E+E
Sbjct: 1845 QPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESE 1904
Query: 458 KELDPDGLKKESERDRAMLAL 478
P+ K+ ++ AL
Sbjct: 1905 GAEAPEAEKEAQPETESVEAL 1925
Score = 34.7 bits (78), Expect = 0.26
Identities = 62/282 (21%), Positives = 96/282 (34%), Gaps = 63/282 (22%)
Query: 320 DQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKG 379
+ A GG++ P + A A G V+ E +G ++
Sbjct: 1817 EAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAP-------------EAEGDAQEA 1863
Query: 380 KPNIGQEQPVDDAAEVPQRE--------------------PEKERGD-PERQREMEEE-- 416
+ G+ QP + E P+ E PE E + PE ++E + E
Sbjct: 1864 E---GEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETE 1920
Query: 417 -----EDEDEDEDEDED-ERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESE 470
E E EDE E E E Q E +E EG P E E+E P ESE
Sbjct: 1921 SVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQP-----ESE 1975
Query: 471 RDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWA 530
A+ T + E + E + + + ++ P +P +
Sbjct: 1976 DVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVE------AQPKS 2029
Query: 531 EGTE----EGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQ 568
EG E EG T+ D + + + P AEE +E +
Sbjct: 2030 EGEEAQEVEGETQKTEGDAQPESD---GVEAPEAEEEAQEAE 2068
Score = 30.8 bits (68), Expect = 3.7
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 376 TKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGE 435
TK+G G ++ E E +E G + + E E + E+E + E+ + GE
Sbjct: 1306 TKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGE 1365
Query: 436 FEKELEGILLPSDRDRLRSETEKELDPDGLKKE 468
+E EG+ L ++ + E +GLK+E
Sbjct: 1366 GLQE-EGVQLEEVKEGPEGGLQGEALEEGLKEE 1397
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 52.8 bits (125), Expect = 9e-07
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 252 PEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGASPTKDDSKDSDF 311
PE+ + V+ +A S ++E +V S K+ SPTK+++K +
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA---------KSPTKEEAKSPEK 651
Query: 312 WKMLNEPEDQAPGGEEVPAEEQDPSPEAADS----ASGAPNDFQNNVQVKVIRSPADLIR 367
K + E ++P + P + + SPE A S + +P ++ V+ + +SP
Sbjct: 652 AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA-KSPEKAKS 710
Query: 368 FIEELKGGTKKGKPNIGQEQPVDDAAEVPQRE----PEKERGDPERQREME--------- 414
++E +K K + +E + A+ P +E PEK + PE+ + ++
Sbjct: 711 PVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAK-SPEKAKTLDVKSPEAKTP 769
Query: 415 -EEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETE--KELDPDGLKKESER 471
+EE + E + + E K E P D E E K+ + KE E+
Sbjct: 770 AKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEK 829
Query: 472 DRAMLALTSTLNKLIKRLEEKQSPEL----VKKHKKKRVVPKKPPPSPQPTGKIEIKIVR 527
+ + + + K+ EE+++P KK KK PKK P P+ K E + +
Sbjct: 830 PQEV-----KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEK 884
Query: 528 P 528
P
Sbjct: 885 P 885
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 292 APQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQ 351
A ++ A A+P ++ KDS K P+ +AP + E+++P+ E + +
Sbjct: 842 AEEEKAPATPKTEEKKDS---KKEEAPKKEAP--KPKVEEKKEPAVEKPKESKVEAKKEE 896
Query: 352 NNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQR 411
+ KV + +E + K K + +++P D A+ P + EK+ PE++
Sbjct: 897 AEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKD 956
Query: 412 EMEEEEDEDEDEDEDE 427
EE+ + E++ + E
Sbjct: 957 TKEEKAKKPEEKPKTE 972
Score = 37.4 bits (85), Expect = 0.040
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 33/297 (11%)
Query: 292 APQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEV--------PAEEQDPSPEAADSA 343
+P+K SP K+++K + PE ++P EE P + + P+ E A S
Sbjct: 546 SPEK--AKSPAKEEAK--------SPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP 595
Query: 344 SGAPNDFQNNVQVK-VIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQ--REP 400
+ A + + VK +SPA+ ++E + K + P + A+ P+ + P
Sbjct: 596 AEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSP 655
Query: 401 EKERG-DPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKE 459
EKE PE+ + + E + ++ + + + K E P + E K
Sbjct: 656 EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAE-----AKSPEKAKSPVKEEAKSPEKAKS 710
Query: 460 LDPDGLKKESERDRAMLALTSTLNKLIKRL-EEKQSPELVKKHKKKRVVPKKPPPSPQPT 518
+ K + + T K + EE +SPE K +K + + K P + P
Sbjct: 711 PVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPA 770
Query: 519 GKIEIKIVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELES 575
+ R A+ E A+ E+ ++ E + L A+ +KE +++E++S
Sbjct: 771 K----EEARSPADKFPEKAKSPVKEEVKS-PEKAKSPLKEDAKAPEKEIPKKEEVKS 822
Score = 31.2 bits (69), Expect = 2.8
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 370 EELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
E++K K K + E+ ++ + E+E+ E + + EE +E+E E +E+
Sbjct: 442 EKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEET 501
Query: 430 RQLLGEF----EKELEGIL---LPSDRDRLRSETEKELDPDGLKK-ESERDRAMLALTST 481
+ E EKE + + S + E E+ P +K E + A S
Sbjct: 502 KSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP 561
Query: 482 LNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSP 515
EE +SP VK +K + K+ SP
Sbjct: 562 PEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP 595
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 52.0 bits (123), Expect = 2e-06
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 33/207 (15%)
Query: 293 PQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQN 352
P+KMA P K+ +DS+ +M + ED + GEEV ++ AA SA
Sbjct: 14 PKKMA--PPPKEVEEDSEDEEMSEDEEDDS-SGEEVVIPQKKGKKAAATSAKKVVVSPTK 70
Query: 353 NVQV-------------KVIRSPADLIRFIEELKGGTKKGKPNIGQEQ-----PVDDAAE 394
V V K +PA + + K T GK + P A
Sbjct: 71 KVAVATPAKKAAVTPGKKAAATPAK--KTVTPAKAVTTPGKKGATPGKALVATPGKKGAA 128
Query: 395 VPQR------EPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSD 448
+P + +KE D E + EE+E++DEDEDEDEDE E P+
Sbjct: 129 IPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEI----EPAAMKAAAAAPAS 184
Query: 449 RDRLRSETEKELDPDGLKKESERDRAM 475
D + E + D D +++ + AM
Sbjct: 185 EDEDDEDDEDDEDDDDDEEDDSEEEAM 211
Score = 44.3 bits (103), Expect = 3e-04
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 288 KSGVAPQKMA--GASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASG 345
K P K A G + K+DS + + ++ E+ E+ +E + P A +A+
Sbjct: 125 KGAAIPAKGAKNGKNAKKEDSDEEED----DDSEEDEEDDEDEDEDEDEIEPAAMKAAAA 180
Query: 346 AP----NDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPE 401
AP D +++ + + E ++ KGK AA+V + +
Sbjct: 181 APASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKK----------AAKVVPVKAK 230
Query: 402 KERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELD 461
D + + + E+E+D+D+++DED+D+ E E+E E + + R + +++
Sbjct: 231 NVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAA 290
Query: 462 PDGLKKESERDRAMLALTSTLNKLIKRLE-EKQSPEL 497
P+ K++ E T+ N + L K +PEL
Sbjct: 291 PEAKKQKVEGTEP----TTAFNLFVGNLNFNKSAPEL 323
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 52.0 bits (123), Expect = 2e-06
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 52/225 (23%)
Query: 302 TKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRS 361
+ +DS+DSDF Q G E +E +D SA A
Sbjct: 1337 SSEDSEDSDF---------QESGVSEEVSESEDEQRPRTRSAKKAE-------------- 1373
Query: 362 PADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDE 421
+EE + K+ K + D ++E E+E E++ E EEEE+E+E
Sbjct: 1374 -------LEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEE---EKEEEEEEEEEEEE 1423
Query: 422 DEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKEL--DPDGLKKESERDRAMLALT 479
+E+++ D+ + G+ K++ IL D+LR+ET+ L + + K+ +ER+R L
Sbjct: 1424 EEEDENDDSKSPGKGRKKIRKIL---KDDKLRTETQNALKEEEERRKRIAEREREREKLR 1480
Query: 480 STL-------------NKLIKRLEEKQSPELVKKHKKKRVVPKKP 511
+ KL+ +E+ LV+ H + V+ KP
Sbjct: 1481 EVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVH-RNMVIKLKP 1524
Score = 33.9 bits (76), Expect = 0.44
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 39/210 (18%)
Query: 348 NDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDP 407
ND +N + K++ +EE+K + ++P ++ + ++ E+ GD
Sbjct: 1227 NDPENRIAKKML---------LEEIKANLSSDEDGSSDDEP-EEGKKRTGKQNEENPGDE 1276
Query: 408 ERQREMEEEEDEDEDED-------------------EDEDERQLLGEFEKELEGILLPSD 448
E + ++ E D D +E E +E++ + KE++G +
Sbjct: 1277 EAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG----RN 1332
Query: 449 RDRLRSETEKELD--PDGLKKE-SERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKR 505
R ++ SE ++ D G+ +E SE + T + K LEE Q KK K++R
Sbjct: 1333 RRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKK--AELEENQRSYKQKK-KRRR 1389
Query: 506 VVPKKPPPSPQPTGKIEIKIVRPWAEGTEE 535
+ ++ S + E + + E EE
Sbjct: 1390 IKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1419
Score = 30.4 bits (67), Expect = 4.8
Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 376 TKKGKPNIGQEQPVDDAAEVPQREPEKERG-DPERQREMEEEEDEDEDEDEDEDERQLLG 434
TKK PN +D E ++G D + + ++ ++ D+ E + ER+
Sbjct: 799 TKKRIPNTKDFDSSED-------EKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFS 851
Query: 435 EFEKELE-GILLPSDRDRLRSETEKELDPDGLKKESERDRAMLAL--------------- 478
E ++ + RDRL + + DG+ K S ++++ +L
Sbjct: 852 SAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHL 911
Query: 479 -TSTLNKL--------IKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPW 529
T T K+ K L++ QS E + KK+ + P K IK+ + +
Sbjct: 912 KTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQY 971
Query: 530 AEGTEEGARWLTDED-----TRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP 584
E + +G L + + + +K+I G + +K+ ++ ++ S +
Sbjct: 972 -ESSSDGTEKLPEREEICHFPKGIKQI-----KNGTTDGEKKSKKIRDKTSKKKDELSDY 1025
Query: 585 GGEGTGDLDEFD 596
+ TG D D
Sbjct: 1026 AEKSTGKGDSCD 1037
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 52.0 bits (123), Expect = 2e-06
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 52/225 (23%)
Query: 302 TKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRS 361
+ +DS+DSDF Q G E +E +D SA A
Sbjct: 1375 SSEDSEDSDF---------QESGVSEEVSESEDEQRPRTRSAKKAE-------------- 1411
Query: 362 PADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDE 421
+EE + K+ K + D ++E E+E E++ E EEEE+E+E
Sbjct: 1412 -------LEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEE---EKEEEEEEEEEEEE 1461
Query: 422 DEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKEL--DPDGLKKESERDRAMLALT 479
+E+++ D+ + G+ K++ IL D+LR+ET+ L + + K+ +ER+R L
Sbjct: 1462 EEEDENDDSKSPGKGRKKIRKIL---KDDKLRTETQNALKEEEERRKRIAEREREREKLR 1518
Query: 480 STL-------------NKLIKRLEEKQSPELVKKHKKKRVVPKKP 511
+ KL+ +E+ LV+ H + V+ KP
Sbjct: 1519 EVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVH-RNMVIKLKP 1562
Score = 33.9 bits (76), Expect = 0.44
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 39/210 (18%)
Query: 348 NDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDP 407
ND +N + K++ +EE+K + ++P ++ + ++ E+ GD
Sbjct: 1265 NDPENRIAKKML---------LEEIKANLSSDEDGSSDDEP-EEGKKRTGKQNEENPGDE 1314
Query: 408 ERQREMEEEEDEDEDED-------------------EDEDERQLLGEFEKELEGILLPSD 448
E + ++ E D D +E E +E++ + KE++G +
Sbjct: 1315 EAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG----RN 1370
Query: 449 RDRLRSETEKELD--PDGLKKE-SERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKR 505
R ++ SE ++ D G+ +E SE + T + K LEE Q KK K++R
Sbjct: 1371 RRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKK--AELEENQRSYKQKK-KRRR 1427
Query: 506 VVPKKPPPSPQPTGKIEIKIVRPWAEGTEE 535
+ ++ S + E + + E EE
Sbjct: 1428 IKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
Score = 30.4 bits (67), Expect = 4.8
Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 376 TKKGKPNIGQEQPVDDAAEVPQREPEKERG-DPERQREMEEEEDEDEDEDEDEDERQLLG 434
TKK PN +D E ++G D + + ++ ++ D+ E + ER+
Sbjct: 837 TKKRIPNTKDFDSSED-------EKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFS 889
Query: 435 EFEKELE-GILLPSDRDRLRSETEKELDPDGLKKESERDRAMLAL--------------- 478
E ++ + RDRL + + DG+ K S ++++ +L
Sbjct: 890 SAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHL 949
Query: 479 -TSTLNKL--------IKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPW 529
T T K+ K L++ QS E + KK+ + P K IK+ + +
Sbjct: 950 KTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQY 1009
Query: 530 AEGTEEGARWLTDED-----TRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP 584
E + +G L + + + +K+I G + +K+ ++ ++ S +
Sbjct: 1010 -ESSSDGTEKLPEREEICHFPKGIKQI-----KNGTTDGEKKSKKIRDKTSKKKDELSDY 1063
Query: 585 GGEGTGDLDEFD 596
+ TG D D
Sbjct: 1064 AEKSTGKGDSCD 1075
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 51.2 bits (121), Expect = 3e-06
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 21/138 (15%)
Query: 380 KPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKE 439
K I ++QP + E+ +RE EKER ER++E+E+E+ E E E E E +R+ E EKE
Sbjct: 491 KLGILEKQPSPE--EIREREREKER---EREKELEKEQ-EQEREKEREKDRERQQEKEKE 544
Query: 440 LEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVK 499
LE ++++ R E EKE ++ E+++ + +L K E+++ EL K
Sbjct: 545 LE-----KEQEKQR-EMEKE-------RKQEKEKELERQKEKEKELQKMKEQEKECELEK 591
Query: 500 KHKK--KRVVPKKPPPSP 515
+ +K +++ P++P P
Sbjct: 592 EREKLEEKIEPREPNLEP 609
Score = 34.3 bits (77), Expect = 0.33
Identities = 49/265 (18%), Positives = 104/265 (39%), Gaps = 27/265 (10%)
Query: 316 NEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGG 375
N P++ + A E + + + D S + Q Q V + P
Sbjct: 343 NSPKENNSEDQGSKASENNENKKETDEVSNTKSSSQIPAQPSVAKVPYG----------- 391
Query: 376 TKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGE 435
KG P+ QE+ P + ++ P+RQ + + + DE ++ +
Sbjct: 392 --KG-PSFNQERGTSSHLPPPPKLLAQQHPPPDRQA-VPGRPGPFPSKQQVADEDEIWKQ 447
Query: 436 FEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSP 495
++ I +R R R E E+ + E +R A L++ + LE++ SP
Sbjct: 448 RRRQQSEISAAVERARKRREEEER------RMEEQRKAACAEKLKRLDEKLGILEKQPSP 501
Query: 496 ELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWLTDEDTRNLKEIFFNI 555
E +++ ++++ ++ + + E + + E +E + L E + + +
Sbjct: 502 EEIREREREKEREREKELEKEQEQEREKEREKD-RERQQEKEKELEKEQEKQRE-----M 555
Query: 556 LVPGAEEAQKERQRQKELESNYRRV 580
+E +KE +RQKE E +++
Sbjct: 556 EKERKQEKEKELERQKEKEKELQKM 580
Score = 31.6 bits (70), Expect = 2.2
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 398 REPEKERGDPER------QREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDR 451
++P+++R +P R ++ +E + E++ + E F + EG P +
Sbjct: 933 QKPDEQRSEPSAGIPKVTSRCIDSKEPIERPEEKPKKEG-----FIRSSEGPK-PEKVYK 986
Query: 452 LRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKK- 510
+SET P ++E DR + +++ ++E++ K+ +K V +K
Sbjct: 987 SKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEKAEKVTEKV 1046
Query: 511 --------------PPPSPQPTGKIEIKIVRP 528
PPP PQP I+ + V P
Sbjct: 1047 VVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPP 1078
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 50.4 bits (119), Expect = 5e-06
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 326 EEVPAEEQDPSPEAADSASGAPNDFQNNVQ---VKVIRSPADLIRFIEELKGGTKKGKPN 382
EE AE +D AS P DFQ++++ +++ R I E KG + KP
Sbjct: 163 EEASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKSSSISEEKGDSDDEKPR 222
Query: 383 IGQEQP----------VDDAAEVPQREPEKE--------RGDPERQREMEEEEDEDEDED 424
G+ + + + ++ + E ++E R D + E EEEE+E+E+ED
Sbjct: 223 KGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEED 282
Query: 425 EDED----------ERQLLGEFEKELEGI------LLPSDRDRLRSETEKELDPDG--LK 466
++E+ E +L EF++E E I + +R + RS+ ++ L+ G +
Sbjct: 283 DEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLERGGRFTR 342
Query: 467 KESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPP 513
+ E ++ LA ++ ++ +K + + K P P
Sbjct: 343 SQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSP 389
Score = 44.3 bits (103), Expect = 3e-04
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 388 PVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPS 447
P+ D+ ++ Q+E E+ ER++ +E+E+E++ E E E ER+ + E+E +
Sbjct: 1228 PLTDS-QIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLERE-KRREHSR 1285
Query: 448 DRDRLRSETEKELDPDGLKKESERDR 473
+RDR R E E+E D ++ ERDR
Sbjct: 1286 ERDRER-ERERERDRGDRDRDRERDR 1310
Score = 32.0 bits (71), Expect = 1.7
Identities = 45/194 (23%), Positives = 69/194 (35%), Gaps = 38/194 (19%)
Query: 386 EQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILL 445
+ P AE ++E ER+REME E + + D D K EG
Sbjct: 1126 QPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRD---------KVREG--- 1173
Query: 446 PSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKR 505
P R R R KE KK ++++A + K +L +K K
Sbjct: 1174 PRSRSRSRDRRRKERAKSKEKKSEKKEKAQ-----------EEPPAKLLDDLFRKTKAAP 1222
Query: 506 VVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQK 565
+ P Q K + AE +E + +++ KE E +
Sbjct: 1223 CIYWLPLTDSQIVQKEAER-----AERAKEREKRRKEQEEEEQKE----------REKEA 1267
Query: 566 ERQRQKELESNYRR 579
ER+R ++LE RR
Sbjct: 1268 ERERNRQLEREKRR 1281
Score = 31.2 bits (69), Expect = 2.8
Identities = 52/235 (22%), Positives = 87/235 (37%), Gaps = 30/235 (12%)
Query: 229 PHPLLRPPPSAA--PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSE 286
P PL PPP PQ HP + E V+ Q ++ + E + + W
Sbjct: 1114 PRPLHPPPPPPVQPPQ----HPRAEQREQERAVREQWAEREREMERRERTRS--EREWDR 1167
Query: 287 TKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDP---SPEAADSA 343
K P+ S ++D + + E + EE PA+ D +AA
Sbjct: 1168 DKVREGPRSR---SRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCI 1224
Query: 344 SGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKE 403
P VQ + R+ E K K+ K +EQ + +R + E
Sbjct: 1225 YWLPLTDSQIVQKEAERA--------ERAKEREKRRKEQEEEEQKEREKEAERERNRQLE 1276
Query: 404 RGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEK 458
R E++RE E D + + + + D + E++ E R+R R +T++
Sbjct: 1277 R---EKRREHSRERDRERERERERDRGDRDRDRERDRE-----RGRERDRRDTKR 1323
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 50.4 bits (119), Expect = 5e-06
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 328 VPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQ 387
VPA+E+ AA P V V P L+ E GG G P + ++
Sbjct: 823 VPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVP--EGTPGGG--GPPALEEDL 878
Query: 388 PVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPS 447
V + + E+E + E + E EEEE+E++ E+E+EDE + E E+E E
Sbjct: 879 TV---ININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE--FEE 933
Query: 448 DRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVV 507
+ + E E+E + + ++E E + T ++ E P +
Sbjct: 934 EFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVE--EGAPPPPTLPPALPPPES 991
Query: 508 PKKPPPSPQPTGKIEIKIVRPWAEGTEE 535
P K P P+P + +++ P GTEE
Sbjct: 992 PPKVQPEPEPEPGLLLEVEEP---GTEE 1016
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 49.7 bits (117), Expect = 8e-06
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 399 EPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEK 458
E KE + E + E EEEE+E+E+E+EDE+E + E E+E P + +S K
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIK 1122
Query: 459 ELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT 518
P LKK+ R R + + T + + E P ++P P +PT
Sbjct: 1123 RKRPFVLKKKRGRKRRRINSSVTTETISETTEVLNEP-------FDNSDEERPMPQLEPT 1175
Query: 519 GKIEIK 524
+IE++
Sbjct: 1176 CEIEVE 1181
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 41/201 (20%)
Query: 282 QVWSE-TKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAA 340
QVW + TK G++ + + K + PE E+V EEQ + E
Sbjct: 1246 QVWPKGTKRGLSKWRQ------NKERKTGFKLNLYTPPETPMEPDEQVTVEEQKETSEGK 1299
Query: 341 DSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQ--------PVDDA 392
S S IR EE+K + G+ + QE+ PV
Sbjct: 1300 TSPSP--------------------IRIEEEVK---ETGEALLPQEENRREETCAPVSPN 1336
Query: 393 AEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGI-LLPSDRDR 451
P +PE + PE + E EEEE+E+E+E+E E+E + G EK+ +G +
Sbjct: 1337 TS-PGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEE-EGGGNVEKDPDGAKSQEKEEPE 1394
Query: 452 LRSETEKELDPDGLKKESERD 472
+ +E E D ++E E D
Sbjct: 1395 ISTEKEDSARLDDHEEEEEED 1415
Score = 39.3 bits (90), Expect = 0.010
Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 64/281 (22%)
Query: 250 LQPEEYMAYVQRQADSKQYGD----KIIEELQDLGPQVW-------SETKSGVAPQKMAG 298
++P+E + +++ S+ +I EE+++ G + ET + V+P G
Sbjct: 1281 MEPDEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALLPQEENRREETCAPVSPNTSPG 1340
Query: 299 ASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKV 358
P D L +PE++ EE EE++ E
Sbjct: 1341 EKPEDD----------LIKPEEEEEEEEEEEEEEEEEEGE-------------------- 1370
Query: 359 IRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEED 418
EE GG + P+ + Q ++ ++E D E + E +EE
Sbjct: 1371 -----------EEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPS 1419
Query: 419 EDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAM--- 475
+ED D D+++ + E E E + S ++ L ++ E LD + S + M
Sbjct: 1420 HNEDHDADDEDDSHMESAEVEKEELPRESFKEVLENQ-ETFLDLNVQPGHSNPEVLMDCG 1478
Query: 476 LALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQ 516
+ LT++ N K L PE V + ++PPP Q
Sbjct: 1479 VDLTASCNSEPKEL--AGDPEAVPES------DEEPPPGEQ 1511
Score = 33.9 bits (76), Expect = 0.44
Identities = 45/223 (20%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 227 LCPHPLLRPPPSAAPQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSE 286
L P R + AP + P +PE+ + + + + ++ EE ++ + E
Sbjct: 1318 LLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEE------EEEEEEEEEEGEE 1371
Query: 287 TKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQA--PGGEEVPAEEQDPSPEAADSAS 344
+ G +K P S++ + ++ E ED A EE E+++PS A
Sbjct: 1372 EEGGGNVEK----DPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDAD 1427
Query: 345 GAPNDFQNNVQVKVIRSPADLIRFIEE-------LKGGTKKGKPNIGQEQPVDDAAEVPQ 397
+ + +V+ P + + + E L P + + VD A
Sbjct: 1428 DEDDSHMESAEVEKEELPRESFKEVLENQETFLDLNVQPGHSNPEVLMDCGVDLTASC-N 1486
Query: 398 REPEKERGDPERQREMEEE--EDEDEDEDEDEDERQLLGEFEK 438
EP++ GDPE E +EE E + + ++ +++ EF++
Sbjct: 1487 SEPKELAGDPEAVPESDEEPPPGEQAQKQDQKNSKEVDTEFKE 1529
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 49.3 bits (116), Expect = 1e-05
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 330 AEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPV 389
A E S E P D + V+V RS + +E+ + I +
Sbjct: 201 AAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEE 260
Query: 390 DDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDR 449
D+ E + E E++ + E + E EEEE+E+E+E+E+E+E + E E+ ++ D
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE---EEEEAAPDVIFQEDT 317
Query: 450 DRLRSETEKEL 460
++ EL
Sbjct: 318 SHTSAQKAPEL 328
Score = 44.3 bits (103), Expect = 3e-04
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 387 QPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLP 446
Q ++DAA E K++G + E +EEE+E+E+E+E+++E + E E+E E
Sbjct: 238 QSLEDAAS---EESSKQKGILSHEEE-DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 293
Query: 447 SDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRV 506
+ + E E+E PD + +E +++PEL
Sbjct: 294 EEEEEEEEEEEEEAAPDVIFQED----------------TSHTSAQKAPELRG------- 330
Query: 507 VPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWLTDE 543
P+ P P P+ + +E++ E T +TDE
Sbjct: 331 -PESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDE 366
Score = 37.0 bits (84), Expect = 0.052
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 18/156 (11%)
Query: 317 EPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGT 376
+PED E QD P++ + A+ + Q + EE
Sbjct: 217 QPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSH------------EEEDEEE 264
Query: 377 KKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEF 436
++ + +++ ++ E + E E+E + E + E EEEE+ D ED +
Sbjct: 265 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQK 324
Query: 437 EKELEGILLPSDRD------RLRSETEKELDPDGLK 466
EL G PS + +RS+ +K+ D K
Sbjct: 325 APELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRK 360
Score = 32.7 bits (73), Expect = 0.97
Identities = 35/176 (19%), Positives = 67/176 (38%), Gaps = 25/176 (14%)
Query: 264 DSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAP 323
D+++ + E QDL PQ + S + ++ S ++D ++ + + E E++
Sbjct: 220 DAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEE 279
Query: 324 GGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNI 383
EE EE++ E + + + D+I F E+ + + P +
Sbjct: 280 EEEEEEEEEEEEEEEEEEEEEEEEEE----------EAAPDVI-FQEDTSHTSAQKAPEL 328
Query: 384 GQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKE 439
R PE PE +E D+D+DED + + E E +
Sbjct: 329 --------------RGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQ 370
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 365 LIRFIEELKGGTKKGKPNIGQEQPVDDAAE----VPQREPEKERGDPERQREMEEEEDED 420
L EEL K+ K +E+ + AE ++ P K ++ E E+EE+E
Sbjct: 473 LTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEG 532
Query: 421 EDEDEDEDERQLLGEFEK---ELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLA 477
++E+E+EDE + E+ E EG + ++ ETE E + + + + E+
Sbjct: 533 QEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEK-----K 587
Query: 478 LTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKP----PPSPQPTGKIEIK 524
+ ++ + E ++ K K K VPK P SP P +E K
Sbjct: 588 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEK 638
Score = 32.3 bits (72), Expect = 1.3
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 285 SETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSAS 344
S+ + G QK K+ K+ K +P+D VP +++ SP ++ +
Sbjct: 692 SKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKD-------VPEKKKAESPVKEEAVA 744
Query: 345 GAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKER 404
+V+V + + + + +++ K K G +E+ D A+ ++E
Sbjct: 745 EVVT-ITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVN 803
Query: 405 GDPERQREMEEEEDEDEDEDEDE 427
G+ E + E+E+E E E+E
Sbjct: 804 GEVEGKEEVEQETKEKGSGREEE 826
Score = 30.8 bits (68), Expect = 3.7
Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 280 GPQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEA 339
G Q ET++ ++ K + K + + + E A E P + + P P++
Sbjct: 564 GEQEEGETEAEAEGEEAEAKEEKKVEEKSEE---VATKEELVADAKVEKPEKAKSPVPKS 620
Query: 340 ADSASGAPNDFQNNVQVK----VIRSPAD------LIRFIEELKGGTKKGKPNIGQE--- 386
G ++ V+ K V +SP + + + E KG + K + ++
Sbjct: 621 PVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS 680
Query: 387 ----QPVDDA---AEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKE 439
PV++A AEV + E ++E ++ EE+ ++ E++ +D E++ KE
Sbjct: 681 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKE 740
Query: 440 LEGI-----LLPSDRDRLRSETEKELDPDGLKKESERDRA 474
E + + S + L ET++E P L++E E+++A
Sbjct: 741 -EAVAEVVTITKSVKVHLEKETKEEGKP--LQQEKEKEKA 777
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 365 LIRFIEELKGGTKKGKPNIGQEQPVDDAAE----VPQREPEKERGDPERQREMEEEEDED 420
L EEL K+ K +E+ + AE ++ P K ++ E E+EE+E
Sbjct: 97 LTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEG 156
Query: 421 EDEDEDEDERQLLGEFEK---ELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLA 477
++E+E+EDE + E+ E EG + ++ ETE E + + + + E+
Sbjct: 157 QEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEK-----K 211
Query: 478 LTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKP----PPSPQPTGKIEIK 524
+ ++ + E ++ K K K VPK P SP P +E K
Sbjct: 212 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEK 262
Score = 32.3 bits (72), Expect = 1.3
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 285 SETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSAS 344
S+ + G QK K+ K+ K +P+D VP +++ SP ++ +
Sbjct: 316 SKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKD-------VPEKKKAESPVKEEAVA 368
Query: 345 GAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKER 404
+V+V + + + + +++ K K G +E+ D A+ ++E
Sbjct: 369 EVVT-ITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVN 427
Query: 405 GDPERQREMEEEEDEDEDEDEDE 427
G+ E + E+E+E E E+E
Sbjct: 428 GEVEGKEEVEQETKEKGSGREEE 450
Score = 30.8 bits (68), Expect = 3.7
Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 280 GPQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEA 339
G Q ET++ ++ K + K + + + E A E P + + P P++
Sbjct: 188 GEQEEGETEAEAEGEEAEAKEEKKVEEKSEE---VATKEELVADAKVEKPEKAKSPVPKS 244
Query: 340 ADSASGAPNDFQNNVQVK----VIRSPAD------LIRFIEELKGGTKKGKPNIGQE--- 386
G ++ V+ K V +SP + + + E KG + K + ++
Sbjct: 245 PVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS 304
Query: 387 ----QPVDDA---AEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKE 439
PV++A AEV + E ++E ++ EE+ ++ E++ +D E++ KE
Sbjct: 305 PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKE 364
Query: 440 LEGI-----LLPSDRDRLRSETEKELDPDGLKKESERDRA 474
E + + S + L ET++E P L++E E+++A
Sbjct: 365 -EAVAEVVTITKSVKVHLEKETKEEGKP--LQQEKEKEKA 401
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 48.9 bits (115), Expect = 1e-05
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 34/132 (25%)
Query: 378 KGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFE 437
K K + ++ + +RE EKERG + R+ E E+D ++D+++D + E E
Sbjct: 385 KEKERVKEKDREKEREREKEREKEKERG-KNKDRDKEREKDREKDKEKDRER-----ERE 438
Query: 438 KELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPEL 497
KE E DRD+ E EKE D + KE E+DR+ K ++EK+
Sbjct: 439 KEHE-----KDRDK---EKEKEQDKE---KEREKDRS------------KEIDEKR---- 471
Query: 498 VKKHKKKRVVPK 509
KK KK R P+
Sbjct: 472 -KKDKKSRTPPR 482
Score = 35.8 bits (81), Expect = 0.11
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 370 EELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
+E + G K + ++ D + +RE EKE E+ R+ E+E+++D++++ ++D
Sbjct: 407 KEKERGKNKDRDKEREKDREKDKEKDREREREKEH---EKDRDKEKEKEQDKEKEREKDR 463
Query: 430 RQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRL 489
+ + E K+ + R RS ++ R + + +K IKR
Sbjct: 464 SKEIDEKRKKDK-----KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRK 518
Query: 490 EEKQ-SPELVKKHKKKR 505
+ SP K KKR
Sbjct: 519 SSRSPSPRSRNKKDKKR 535
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 48.9 bits (115), Expect = 1e-05
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 34/132 (25%)
Query: 378 KGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFE 437
K K + ++ + +RE EKERG + R+ E E+D ++D+++D + E E
Sbjct: 269 KEKERVKEKDREKEREREKEREKEKERG-KNKDRDKEREKDREKDKEKDRER-----ERE 322
Query: 438 KELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPEL 497
KE E DRD+ E EKE D + KE E+DR+ K ++EK+
Sbjct: 323 KEHE-----KDRDK---EKEKEQDKE---KEREKDRS------------KEIDEKR---- 355
Query: 498 VKKHKKKRVVPK 509
KK KK R P+
Sbjct: 356 -KKDKKSRTPPR 366
Score = 35.8 bits (81), Expect = 0.11
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 370 EELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
+E + G K + ++ D + +RE EKE E+ R+ E+E+++D++++ ++D
Sbjct: 291 KEKERGKNKDRDKEREKDREKDKEKDREREREKEH---EKDRDKEKEKEQDKEKEREKDR 347
Query: 430 RQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRL 489
+ + E K+ + R RS ++ R + + +K IKR
Sbjct: 348 SKEIDEKRKKDK-----KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRK 402
Query: 490 EEKQ-SPELVKKHKKKR 505
+ SP K KKR
Sbjct: 403 SSRSPSPRSRNKKDKKR 419
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 48.5 bits (114), Expect = 2e-05
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 25/254 (9%)
Query: 231 PLLRPPPSAAPQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSG 290
P ++P +++ + + + E Q A++KQ + ++EE + + E K
Sbjct: 32 PEVKPKRTSSSRKMKTKSDMMEENIDTSAQAVAETKQ--EAVVEEDYNENAKN-GEAKIT 88
Query: 291 VAP-----------QKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEA 339
AP + + A+ + K++ ++ NE EDQ E+ E+ + E
Sbjct: 89 EAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKED 148
Query: 340 ADSAS--GAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEV-- 395
D D N + + + D + E+ KG + GK E+ +D E
Sbjct: 149 KDEKGEEDGKEDKNGNEKGEDAKEKEDGKKG-EDGKGNGEDGKEKGEDEKEEEDRKETGD 207
Query: 396 -PQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS 454
+ E KE+GD + ++++ +EDE E ED EDE E KE E + ++
Sbjct: 208 GKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDL-----KEEEEG 262
Query: 455 ETEKELDPDGLKKE 468
+ E E+ D KKE
Sbjct: 263 KEEDEIKEDDGKKE 276
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 48.5 bits (114), Expect = 2e-05
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 394 EVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLR 453
E ++E EKER + ER+RE E E E E E E E ER+ E E+E E DRDR R
Sbjct: 299 EKERQEIEKERRERERERERERERREREREREREREREKEKERERERE-----RDRDRDR 353
Query: 454 SETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEK 492
++ E++ D D +E +RDR +S NK R EK
Sbjct: 354 TK-ERDRDRD---RERDRDRDR-ERSSDRNKDRSRSREK 387
Score = 47.4 bits (111), Expect = 4e-05
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 364 DLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDE 423
D + +EE KG +K + I +E+ + +RE + + ER+RE E+E++ + +
Sbjct: 286 DTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERER 345
Query: 424 DEDED-ERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTL 482
+ D D +R + +++ E DRDR RS + +K +R+R
Sbjct: 346 ERDRDRDRTKERDRDRDRE---RDRDRDRERSSDRNKDRSRSREKSRDRERERERERERE 402
Query: 483 NKLIKRLEEKQSPELVKKHKKKRVVPKK-----PPPSPQPTGKIEIKIVRPWAEGTEEGA 537
+ + E ++ E ++ +++R KK K+E K+ A E
Sbjct: 403 REREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLK 462
Query: 538 RWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRV 580
W E + + +EA++E +R++E+ +R+
Sbjct: 463 NWEIRERKKTREY---------EKEAEREEERRREMAKEAKRL 496
Score = 36.2 bits (82), Expect = 0.088
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 39/149 (26%)
Query: 398 REPEKE-RGDPERQREMEEEED------EDEDEDEDEDE-------RQLLGEFEKELEGI 443
RE EKE + ER+REM +E ED D+D D+ + ++ L + EKE+E
Sbjct: 473 REYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEA- 531
Query: 444 LLPSDRDRLRSETEKE-----------LDPDG----LKKESERDRAMLALTSTLNKLIKR 488
+RDR R + E E DPD +++E+ER R K
Sbjct: 532 ---DERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRR------QPQIKQEPE 582
Query: 489 LEEKQSPELVKKHKKKRVVPKKPPPSPQP 517
EE++ + K+ K++ + ++ P +P
Sbjct: 583 SEEEEEEKQEKEEKREEPMEEEEEPEQKP 611
Score = 33.5 bits (75), Expect = 0.57
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 390 DDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELE 441
D AE+ + E E ER + ++ E E+E+E++ E E++R+ E E+E E
Sbjct: 557 DPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPE 608
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 380 KPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKE 439
K +I + +D ++ RE K R + +++EEE+ + E E ++ ++ + E E+E
Sbjct: 261 KEDINAIEMEEDKRDLISREISKFR---DTHKKLEEEKGKKEKERQEIEKERRERERERE 317
Query: 440 LEGILLPSDRDRLRSETEKELDPD-GLKKESERDR 473
R+R R E E+E + + +KE ER+R
Sbjct: 318 ---------RERERREREREREREREREKEKERER 343
Score = 31.6 bits (70), Expect = 2.2
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 398 REPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETE 457
R+ EKE ER R+ E+EE E E ++LL E + + ++ R+ E E
Sbjct: 523 RDREKEMEADERDRKREKEELE-------EIRQRLLAEGHPDPD-----AELQRMEQEAE 570
Query: 458 KELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQP 517
+ P +K+E E + K + +EE++ PE +K + P P S P
Sbjct: 571 RRRQPQ-IKQEPESEEEEEEKQEKEEKREEPMEEEEEPE-----QKPCLKPTLRPISSAP 624
Query: 518 T 518
+
Sbjct: 625 S 625
Score = 30.4 bits (67), Expect = 4.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 397 QREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
++EPE E + E+Q + E+ E+ E+E+E E +
Sbjct: 578 KQEPESEEEEEEKQEKEEKREEPMEEEEEPEQK 610
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 48.5 bits (114), Expect = 2e-05
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 393 AEVPQREPE---KERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDR 449
+E+ +RE E ++ G ER+ E ++E E E + ++ + +KE +G +R
Sbjct: 36 SEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEER 95
Query: 450 DRLRSETEKELDPDGLKKE--SERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVV 507
+R + EKE + +G +KE ++++ TS K +R EE++ E ++ +KK
Sbjct: 96 ERKKRRREKE-NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEER 154
Query: 508 PKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKER 567
K+ + K E K V E +E R + RN KE E +KER
Sbjct: 155 EKERERKERK--KRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKER 212
Query: 568 --------QRQKELESNYR 578
+RQK+ ++N+R
Sbjct: 213 KKKEERKKERQKDRQTNWR 231
Score = 40.4 bits (93), Expect = 0.005
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 370 EELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
EE + KK K G+ + E ++E K ER+R+ EE E E E ++ + E
Sbjct: 110 EEKEKRKKKEKKERGRTSK--EGKERERKEERKREERKERERKKEEREKERERKERKKRE 167
Query: 430 RQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRL 489
R+ +GE E+E + + R R+ E+ KKE ER +R
Sbjct: 168 RKQVGEKEEERKEKERKERKKRERNRKER-------KKERERK--------------ERR 206
Query: 490 EEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIK 524
E K+ + ++ KK+R ++ + GK E K
Sbjct: 207 ERKKERKKKEERKKERQKDRQTNWREKERGKRERK 241
Score = 39.3 bits (90), Expect = 0.010
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 370 EELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
+E KG KK + + + + E ++E K++ ER R +E ++ + E+ +E
Sbjct: 84 KEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREE 143
Query: 430 RQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRL 489
R+ +R+R + E EKE + K+ +R+R + K +R
Sbjct: 144 RK----------------ERERKKEEREKERE---RKERKKRERKQVGEKEEERKEKERK 184
Query: 490 EEKQSPELVKKHKKKR 505
E K+ K+ KK+R
Sbjct: 185 ERKKRERNRKERKKER 200
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 48.5 bits (114), Expect = 2e-05
Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 50/334 (14%)
Query: 261 RQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQ-KMAGASPTKDDSKDSDFWKMLNEPE 319
++ + + D EEL+D S++K P+ +M S DD N+
Sbjct: 101 QKGKKQSFDDNDSEELEDKD----SKSKKTAKPKVEMYSGSDDDDD---------FNKLP 147
Query: 320 DQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKG 379
+A G + ++ D S E D++ + N + S + F++ KG K
Sbjct: 148 KKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGE---SGDESDEFLQSRKGQKKNQ 204
Query: 380 K----PNIGQEQPVDDA-----------AEVPQREPEKERGDPERQREMEEEEDEDEDED 424
K PNI DDA AE +RE +K + + R+++E+E+ + +
Sbjct: 205 KNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKK 264
Query: 425 EDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNK 484
+ +++ +FE+E + D + + EK P + ++E D+
Sbjct: 265 DQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKK---------- 314
Query: 485 LIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKIVRPWAEGTEEGARWLTDED 544
K+ ++K+ E +K K+K+ P K ++K + EE +E
Sbjct: 315 --KKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEEL 372
Query: 545 TRNLKEIFFNILVPGAEEAQKERQRQKELESNYR 578
KE E+ ++ER++QKE E R
Sbjct: 373 EAKRKE------EERLEQEKRERKKQKEKERKER 400
Score = 44.3 bits (103), Expect = 3e-04
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 391 DAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRD 450
+ E P+ E E+E + E + EEEE+E E E + DE EK+ L
Sbjct: 526 EVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSK 585
Query: 451 RLRSETEKELDPDGLKKESERDRA 474
+ S++E + D D K+E D+A
Sbjct: 586 EMSSDSEYDSDDDRTKEERAYDKA 609
Score = 36.2 bits (82), Expect = 0.088
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 385 QEQPVDDA------AEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEK 438
+E+ +DA A E EK G+ E E+E+E+E+E+E++ + E E+
Sbjct: 494 EEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEE--SEEEE 551
Query: 439 ELEGILLPSDRDRLRSETEKELD-PDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPEL 497
E EG S+ D E EK D D K ++ ++ S + R +E+++ +
Sbjct: 552 EEEGESEGSEGD---EEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDK 608
Query: 498 VKKHKKKR 505
K+ +KR
Sbjct: 609 AKRRIEKR 616
Score = 33.9 bits (76), Expect = 0.44
Identities = 78/359 (21%), Positives = 138/359 (38%), Gaps = 55/359 (15%)
Query: 280 GPQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPED--QAPGGEEVPAEEQDPSP 337
GP + S + A K+ + K + K+ + K E + EE+ ++D S
Sbjct: 209 GPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSK 268
Query: 338 EAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDA---AE 394
+ ++ V V PA E+ + T N G ++ D E
Sbjct: 269 QKESQRKFEEETVKSKVTVDTGVIPASE----EKAETPTAAEDDNEGDKKKKDKKKKKGE 324
Query: 395 VPQREPEKERGDPERQ-REMEE-----EEDEDEDEDEDEDERQLLGEFE-KELEGILLPS 447
++E EK++G + + M+E +E+E+ + E+E+ + L E E K E L
Sbjct: 325 KEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQ 384
Query: 448 DRDRLRSETEKELDPDGLKKE----SERDRAMLALTSTLNKLIKR--LEEKQSPELVKKH 501
++ + + EKE + LKKE ++ R A KL++ +E L KK
Sbjct: 385 EKRERKKQKEKE-RKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKR 443
Query: 502 -----KKKRVVP-----KKPPPSPQPTGKIEI------------KIVRPWAE------GT 533
KK++ +P K+ S + +E+ V P E G
Sbjct: 444 PIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGL 503
Query: 534 EEGARWLTDEDTRNLKEIFFNILV----PGAEEAQKERQRQKELESNYRRVWGSPGGEG 588
++ +DE+T ++ +I V EE ++E + +E E S G EG
Sbjct: 504 DDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEG 562
Score = 31.2 bits (69), Expect = 2.8
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 378 KGKPNIGQEQPVDD------AAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQ 431
K + N ++ DD AAE+ KE+ +P++ + +++E + +D DED+ ++
Sbjct: 3 KKQKNKSEDSTKDDIDLDALAAEIEGAGAAKEQ-EPQKSKGKKKKEKKKQDFDEDDILKE 61
Query: 432 LLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEE 491
L E E +GI +DR+ + + + + + K+ ++ S + + LE+
Sbjct: 62 -LEELSLEAQGI--KADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELED 118
Query: 492 KQSPELVKKHKKKRV--------------VPKKPPPSPQPTGKIEIKIVRPWAEGTEEGA 537
K S KK K +V +PKK Q + K W +G+EE
Sbjct: 119 KDSKS--KKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNK-------KW-DGSEE-- 166
Query: 538 RWLTDEDTRNLKE-IFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTGDLDEFD 596
+++++ +KE N +E+ + Q +K + N + G P E + D+
Sbjct: 167 ---DEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPG-PNIESGNEDDDAS 222
Query: 597 F 597
F
Sbjct: 223 F 223
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 47.4 bits (111), Expect = 4e-05
Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 41/311 (13%)
Query: 258 YVQRQADSKQYGDKIIEEL-QDLGPQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLN 316
+V+ +A +Q DK +E+ +DL E K QK P D ++ D K L
Sbjct: 1395 HVKNEAVKQQ--DKALEQKGRDL------EQKDTALEQKDKALEPKDKDLEEKD--KAL- 1443
Query: 317 EPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGT 376
E +D+ P ++ E++D + E D A P D + +V+ + EE
Sbjct: 1444 EQKDKIPEEKDKALEQKDTALEQKDKAL-EPKDKDLEQKDRVLEQKE---KIPEEKDKAL 1499
Query: 377 KKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDED--EDERQLLG 434
+ ++ + P D AE+ R+ E+ PE++ + +E++D+ ++ + E + LG
Sbjct: 1500 DQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQAQEQKDKVSEKKDQALEQKYWALG 1559
Query: 435 EFEKELEGILLPSDRDRLRSETE--------------KELDPDGLKKESERDRAMLALTS 480
+ ++ LE + + + E E +E P+ +K E+ A+L T
Sbjct: 1560 QKDEALEQNIQALEENHQTQEQESLVQEDKTRKPKMLEEKSPEKVKAMEEKLEALLEKTK 1619
Query: 481 TLNKLIKRLEEKQSPELVKKHKKKRVVPKK----PPPSPQPTGKIEIKIVRPWAEGT--- 533
L ++E ++ E +K+ + + V ++ P +P G E K + P E T
Sbjct: 1620 ALGLEESLVQEGRAREQEEKYWRGQDVVQEWQETSPTREEPAG--EQKELAPAWEDTSPE 1677
Query: 534 EEGARWLTDED 544
++ W ED
Sbjct: 1678 QDNRYWRGRED 1688
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 314 MLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELK 373
+L E D G + P + + P + + G P Q + + +L+ + E +
Sbjct: 545 LLAEQRDTGLGDKPFPLDTAEEGPPST-AIQGTPPSVPGLGQEEHVMKEKELVPEVPEEQ 603
Query: 374 GGTKKG---------KPNIGQEQPVDDAAEVPQREPEKERGDPE------RQREMEEEED 418
G +G + + +E+ +A +P R +E +PE + E+EE E+
Sbjct: 604 GSKDRGLDSGAETEEEKDTWEEKKQREAERLPDRTEAREESEPEVKEDVIEKAELEEMEE 663
Query: 419 EDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERDRAMLAL 478
++E+ED + G ++K ++ L + R R + +EL G E E + +L
Sbjct: 664 VHPSDEEEEDATKAEGFYQKHMQEPLKVTPRSR-EAFGGRELGLQGKAPEKETSLFLSSL 722
Query: 479 TS 480
T+
Sbjct: 723 TT 724
Score = 43.9 bits (102), Expect = 4e-04
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 30/158 (18%)
Query: 314 MLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELK 373
+L+ PED EE+ EE+ E D+ G D + P+ I+
Sbjct: 524 VLSSPEDLTQDFEEMKREERALLAEQRDTGLG---DKPFPLDTAEEGPPSTAIQ------ 574
Query: 374 GGTKKGKPNIGQEQPV----DDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
GT P +GQE+ V + EVP+ + K+RG + E EEE+D E++ + E E
Sbjct: 575 -GTPPSVPGLGQEEHVMKEKELVPEVPEEQGSKDRG-LDSGAETEEEKDTWEEKKQREAE 632
Query: 430 RQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKK 467
R LP DR R E+E E+ D ++K
Sbjct: 633 R--------------LP-DRTEAREESEPEVKEDVIEK 655
Score = 30.8 bits (68), Expect = 3.7
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 62/256 (24%)
Query: 335 PSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAE 394
P D ASGA N++ I+ AD E LK TK ++
Sbjct: 292 PVATQKDLASGA---VPTNLKPSKIKQRADSK---ESLKATTKTA------------VSK 333
Query: 395 VPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRS 454
+ +RE E G E + E+ +E + E + ++ E+
Sbjct: 334 LAKREEVVEEGAKEARSELAKELAKTEKKAKESSEKP----------------------- 370
Query: 455 ETEKELDPDGLKKESERDRAMLALTSTLNKLIK------RLEEKQSPELVKKHKKKRVVP 508
EK P+ +K ES AL + KLIK L+EK S KK K+K+ +
Sbjct: 371 -PEKPAKPERVKTESSE-----ALKAEKRKLIKDKVGKKHLKEKISKLEEKKDKEKKEIK 424
Query: 509 KKPPPSPQPTGKIEIKIVRPWAE---GTEEGARWLTDED----TRNLKEIFFNILVPGAE 561
K+ + G+ E K E T+ + ++ D T +++ + VPG
Sbjct: 425 KERKELKKDEGRKEEKKDAKKEEKRKDTKPELKKISKPDLKPFTPEVRKTLYKAKVPGRV 484
Query: 562 EAQKER--QRQKELES 575
+ + R + +KEL S
Sbjct: 485 KIDRSRAIRGEKELSS 500
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 47.4 bits (111), Expect = 4e-05
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 326 EEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIGQ 385
+EVP++E+ PSP A+ A D VK + ++ ++K KK + +
Sbjct: 605 KEVPSKEE-PSPVKAEVAEKQATD------VKPKAAKEKTVKKETKVKPEDKKEE----K 653
Query: 386 EQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILL 445
E+P + A+ + P K+ P+++ +E + E + E++ E ++++ E +
Sbjct: 654 EKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPK------ 707
Query: 446 PSDRDRLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKH--KK 503
++ E +KE + K+E E + + L K L E + P +K KK
Sbjct: 708 -----EVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKK 762
Query: 504 KRVVPKKPPPSPQPTGKIEIKIVRPWAEGTE 534
+ V K + +P K +IK+++ + E
Sbjct: 763 EESVKKDSVAAGKPKEKGKIKVIKKEGKAAE 793
Score = 40.8 bits (94), Expect = 0.004
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 31/278 (11%)
Query: 244 ILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQK-MAGASPT 302
I+ HP+ P E + V +S QY I+E L+ L + K +A QK + G PT
Sbjct: 473 IVWHPA-NPAEKIIRVLFPGNSTQYN--ILEGLEKL--KHLDFLKQPLATQKDLTGQVPT 527
Query: 303 KDDSKDSDFWKMLNEPEDQAPGGEEVPA-----EEQDPSPEAADSASGAPNDFQNNVQV- 356
K + + + E P + +P+ E ++ +PE N+V+
Sbjct: 528 PV-VKQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKV---------NHVEKP 577
Query: 357 -KVIRSPADLIRFIEELKGGTKKG---KPNIGQEQPVDDAAEVPQREPEKERGDPERQRE 412
KV +++ + +K TK K +E+P AEV +++ + +++
Sbjct: 578 PKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 413 MEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSETEKELDPDGLKKESERD 472
+++E + + ED+ E++ + E K+ + + + + E +KE+ + +KKE +++
Sbjct: 638 VKKET-KVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKE-IKKEEKKE 695
Query: 473 RAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKK 510
T K +K+ +K+ + VKK +K+ PKK
Sbjct: 696 PKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE---PKK 730
Score = 36.2 bits (82), Expect = 0.088
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 30/233 (12%)
Query: 281 PQVWSETKSGVAPQKMAGASPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQ--DPSPE 338
P+V S+ K V K P K ++K S K + E+ +P EV AE+Q D P+
Sbjct: 578 PKVESKEKVMVKKDK-----PIKTETKPSVTEKEVPSKEEPSPVKAEV-AEKQATDVKPK 631
Query: 339 AADSASGA------PNDFQNNVQV--KVIRSPADLIRFIEELKGGTKKGKPNIGQEQPVD 390
AA + P D + + K + D +E K ++ K + +E +
Sbjct: 632 AAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKE 691
Query: 391 DAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRD 450
+ E P++E +KE E ++E+++EE ++ ++E E ++++ LP D
Sbjct: 692 EKKE-PKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIK----------KLPKDAK 740
Query: 451 RLRSETEKELDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKK 503
+ + + P LK + + + S + +EK +++KK K
Sbjct: 741 KSSTPLSEAKKPAALKPKVPKKEESVKKDSV---AAGKPKEKGKIKVIKKEGK 790
Score = 31.2 bits (69), Expect = 2.8
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 326 EEVPAEEQDPSPEAADSASG-APNDFQNNVQVKVIRSPADLIRFIEELKGGTKKGKPNIG 384
EE E+D SAS +P + + + + A+ +I E + G
Sbjct: 949 EEAEEPEEDGEEHVCVSASKHSPTEDEESAK-------AEADAYIREKRESVASGDDRA- 1000
Query: 385 QEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDED 428
E+ +D+A E + E +E D E + E EE+ + ++ E ED
Sbjct: 1001 -EEDMDEAIEKGEAEQSEEEADEEDKAEDAREEEYEPEKMEAED 1043
Score = 29.6 bits (65), Expect = 8.2
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 390 DDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDE 429
DD AE E E+G+ E+ E +EED+ ED E+E E
Sbjct: 997 DDRAEEDMDEAI-EKGEAEQSEEEADEEDKAEDAREEEYE 1035
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,475,407
Number of Sequences: 37866
Number of extensions: 1672931
Number of successful extensions: 28003
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 689
Number of HSP's that attempted gapping in prelim test: 12095
Number of HSP's gapped (non-prelim): 6574
length of query: 597
length of database: 18,247,518
effective HSP length: 108
effective length of query: 489
effective length of database: 14,157,990
effective search space: 6923257110
effective search space used: 6923257110
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.