RINT1 34288

Name: RINT1	Sequence: fasta or formatted (792aa)		NCBI GI: 62899047
Description: RAD50 interactor 1		Referenced in: Centrosome DNases, Recombination, and DNA Repair ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 51 2 C cysteine 1.8 14 2 D aspartate 5.1 40 2 E glutamate 8.0 63 2 F phenylalanine 4.4 35 2 G glycine 3.0 24 2 H histidine 2.3 18 1 I isoleucine 5.2 41 2 K lysine 6.1 48 2 L leucine 15.0 119 3 M methionine 2.9 23 2 N asparagine 4.0 32 2 P proline 3.8 30 2 Q glutamine 6.2 49 2 R arginine 3.8 30 1 S serine 7.7 61 3 T threonine 4.8 38 1 V valine 5.6 44 1 W tryptophan 1.5 12 1 Y tyrosine 2.5 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAD50 interactor 1 TPR 0.009 nuclear pore complex-associated protein TPR SMC1A 0.007 structural maintenance of chromosomes 1A RPGRIP1L 0.006 RPGRIP1-like isoform b RPGRIP1L 0.006 RPGRIP1-like isoform a CCDC6 0.006 coiled-coil domain containing 6 KANK1 0.006 KN motif and ankyrin repeat domains 1 isoform b [Hom... KANK1 0.006 KN motif and ankyrin repeat domains 1 isoform a [Hom... CEP72 0.006 centrosomal protein 72 kDa EPS15 0.006 epidermal growth factor receptor pathway substrate ... EPS15 0.006 epidermal growth factor receptor pathway substrate 15... SPTBN5 0.005 spectrin, beta, non-erythrocytic 5 TDRD7 0.005 tudor domain containing 7 ROCK1 0.005 Rho-associated, coiled-coil containing protein kinase... TRIM27 0.005 ret finger protein FSIP1 0.005 fibrous sheath interacting protein 1 NTRK3 0.005 neurotrophic tyrosine kinase, receptor, type 3 isofo... NTRK3 0.005 neurotrophic tyrosine kinase, receptor, type 3 isofo... DCTN1 0.005 dynactin 1 isoform 4 DCTN1 0.005 dynactin 1 isoform 3 DCTN1 0.005 dynactin 1 isoform 2 DCTN1 0.005 dynactin 1 isoform 1 SETX 0.005 senataxin FAM9C 0.005 family with sequence similarity 9, member C ANAPC5 0.004 anaphase-promoting complex subunit 5 isoform b [Hom... ANAPC5 0.004 anaphase-promoting complex subunit 5 isoform a [Homo... MLXIP 0.004 MLX interacting protein GOLGB1 0.004 golgi autoantigen, golgin subfamily b, macrogolgin ... MORC4 0.004 zinc finger, CW type with coiled-coil domain 2 isof... CCDC40 0.004 coiled-coil domain containing 40 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.