Search of human proteins with 62821785

Search of human proteins with 62821785

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|62821785 NHL repeat containing 3 isoform b [Homo sapiens]
         (280 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62821785 NHL repeat containing 3 isoform b [Homo sapiens]          582   e-167
gi|61098457 NHL repeat containing 3 isoform a [Homo sapiens]          514   e-146
gi|84993742 tripartite motif-containing 71 [Homo sapiens]              55   5e-08
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]    54   2e-07
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]    54   2e-07
gi|32454739 tripartite motif-containing 3 [Homo sapiens]               52   8e-07
gi|32454737 tripartite motif-containing 3 [Homo sapiens]               52   8e-07
gi|153791514 tripartite motif-containing 32 [Homo sapiens]             44   2e-04
gi|153792582 tripartite motif-containing 32 [Homo sapiens]             44   2e-04
gi|21070984 peptidylglycine alpha-amidating monooxygenase isofor...    40   0.002
gi|21070982 peptidylglycine alpha-amidating monooxygenase isofor...    40   0.002
gi|21070980 peptidylglycine alpha-amidating monooxygenase isofor...    40   0.002
gi|21070974 peptidylglycine alpha-amidating monooxygenase isofor...    40   0.002
gi|30794216 tripartite motif-containing 56 [Homo sapiens]              33   0.28 
gi|6005757 chromatin-specific transcription elongation factor la...    32   0.47 
gi|18640734 contactin associated protein-like 5 [Homo sapiens]         31   1.4  
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]                30   3.1  
gi|16554629 WD repeat domain 5 [Homo sapiens]                          29   5.2  
gi|16554627 WD repeat domain 5 [Homo sapiens]                          29   5.2  
gi|113865883 WD repeat domain 38 [Homo sapiens]                        29   5.2  
gi|40255283 NHL repeat containing 1 [Homo sapiens]                     28   8.9  

>gi|62821785 NHL repeat containing 3 isoform b [Homo sapiens]
          Length = 280

 Score =  582 bits (1501), Expect = e-167
 Identities = 280/280 (100%), Positives = 280/280 (100%)

Query: 1   MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT 60
           MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT
Sbjct: 1   MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT 60

Query: 61  GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS 120
           GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS
Sbjct: 61  GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS 120

Query: 121 VWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEW 180
           VWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEW
Sbjct: 121 VWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEW 180

Query: 181 LGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQ 240
           LGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQ
Sbjct: 181 LGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQ 240

Query: 241 VLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 280
           VLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS
Sbjct: 241 VLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 280


>gi|61098457 NHL repeat containing 3 isoform a [Homo sapiens]
          Length = 347

 Score =  514 bits (1323), Expect = e-146
 Identities = 267/347 (76%), Positives = 271/347 (78%), Gaps = 67/347 (19%)

Query: 1   MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT 60
           MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT
Sbjct: 1   MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFT 60

Query: 61  GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS 120
           GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS
Sbjct: 61  GTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQS 120

Query: 121 VWITDVGSDF---------------MILWLHGENGT--GPAKFNIP-------------- 149
           VWITDVGS F                +L   G+ GT   P +F+ P              
Sbjct: 121 VWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNPLQFDNPAELYVEDTGDIYIV 180

Query: 150 ------------------------------------HSVTLDSAGRVWVADRGNKRIQVF 173
                                               HSVTLDSAGRVWVADRGNKRIQVF
Sbjct: 181 DGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVF 240

Query: 174 DKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVIS 233
           DKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVIS
Sbjct: 241 DKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVIS 300

Query: 234 TIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 280
           TIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS
Sbjct: 301 TIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 347


>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
          Length = 868

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 24/141 (17%)

Query: 86  KILVFTEDGYFLRAWNYT------VDTPHGIFAASTLYEQSVWITDVGSDFMILWLH--- 136
           +I +F  DG FL  + +        D+P G+   +  +E  + +TD  ++  +L +H   
Sbjct: 723 RIQLFGPDGVFLNKYGFEGALWKHFDSPRGV---AFNHEGHLVVTDF-NNHRLLVIHPDC 778

Query: 137 ------GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWL---GAWNNC 187
                 G  GTG  +F  P  V +D  GR+ VAD  N R+Q+F+ + G +L   GA  + 
Sbjct: 779 QSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESN-GSFLCKFGAQGSG 837

Query: 188 FTE-EGPSSVRFTPDGKYLIV 207
           F + + PS +  TPDG  ++V
Sbjct: 838 FGQMDRPSGIAITPDGMIVVV 858



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 27/157 (17%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG---- 192
           GE GT   +FN P  V ++S G++ V+D  N RIQ+F  D     G + N +  EG    
Sbjct: 691 GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPD-----GVFLNKYGFEGALWK 745

Query: 193 ----PSSVRFTPDGKYLIVAQLNLSRLSVV-----AAPPVGSIGECSVISTIQLADQVLP 243
               P  V F  +G +L+V   N  RL V+     +A  +GS G  +          + P
Sbjct: 746 HFDSPRGVAFNHEG-HLVVTDFNNHRLLVIHPDCQSARFLGSEGTGN-------GQFLRP 797

Query: 244 HLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 280
             + VD++ G + VA+    +VQ +    S++  FG+
Sbjct: 798 QGVAVDQE-GRIIVADSRNHRVQMFESNGSFLCKFGA 833



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)

Query: 31  RNFTFAVSWRTEKILYRLDVGWPKHPEYFTGTTFCVAVDSLNGLVYIGQRGDNIPKILVF 90
           +N T+ VS+R +     L V      ++   + F V V S    V IG     +P +   
Sbjct: 544 QNGTYVVSYRPQLEGEHL-VSVTLCNQHIENSPFKVVVKSGRSYVGIG-----LPGLSFG 597

Query: 91  TE---DGYFLRAWNYTVDTPHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFN 147
           +E   DG   R W  +VD    I  A     +       G+        G  G+ P +F+
Sbjct: 598 SEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGA---FHHKFGTLGSRPGQFD 654

Query: 148 IPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG----PSSVRFTPDGK 203
            P  V  D++ R+ VAD+ N RIQ+F  + G++L  +    T+ G    P  V    +GK
Sbjct: 655 RPAGVACDASRRIVVADKDNHRIQIFTFE-GQFLLKFGEKGTKNGQFNYPWDVAVNSEGK 713

Query: 204 YLI 206
            L+
Sbjct: 714 ILV 716



 Score = 34.3 bits (77), Expect = 0.12
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 91  TEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFNIPH 150
           T +G FLR     VD    I  A +   +       GS    L   G  G+G  + + P 
Sbjct: 789 TGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGS---FLCKFGAQGSGFGQMDRPS 845

Query: 151 SVTLDSAGRVWVADRGNKRIQVF 173
            + +   G + V D GN RI VF
Sbjct: 846 GIAITPDGMIVVVDFGNNRILVF 868


>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
          Length = 744

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 117 YEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKD 176
           +  SV + +   +FM+ +  G NG G  +FN P  V +DS G + VAD GN RIQVFD  
Sbjct: 642 HNHSVKVFNQEGEFMLKF--GSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD-G 698

Query: 177 TGEWLGAWNNCFTE-EGPSSVRFTPDGKYLI 206
           +G +L   N       GP  +  T DG  ++
Sbjct: 699 SGSFLSYINTSADPLYGPQGLALTSDGHVVV 729



 Score = 32.7 bits (73), Expect = 0.36
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 16/142 (11%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG---- 192
           G  G    +F     V   + G++ +AD  N+ +Q+F  D     G + + F   G    
Sbjct: 477 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSND-----GQFKSRFGIRGRSPG 531

Query: 193 ----PSSVRFTPDGKYLIVAQLNLSRLSVVAAPP--VGSIGECSVISTIQLADQVLPHLL 246
               P+ V   P G  +I+A  +   +S+ ++       IG   ++    ++     H++
Sbjct: 532 QLQRPTGVAVHPSGD-IIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHII 590

Query: 247 EVDRKTGAVYVAEIGAKQVQKY 268
            VD K   V++ +   K V ++
Sbjct: 591 VVDNKACCVFIFQPNGKIVTRF 612



 Score = 32.0 bits (71), Expect = 0.62
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWL------GAWNNCFTE 190
           G  G G  +F  PH   ++S   + + D  N  ++VF+++ GE++      G  N  F  
Sbjct: 613 GSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQE-GEFMLKFGSNGEGNGQF-- 669

Query: 191 EGPSSVRFTPDGKYLIVAQLNLSRLSV 217
             P+ V    +G  +IVA    SR+ V
Sbjct: 670 NAPTGVAVDSNGN-IIVADWGNSRIQV 695


>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
          Length = 771

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 117 YEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKD 176
           +  SV + +   +FM+ +  G NG G  +FN P  V +DS G + VAD GN RIQVFD  
Sbjct: 669 HNHSVKVFNQEGEFMLKF--GSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD-G 725

Query: 177 TGEWLGAWNNCFTE-EGPSSVRFTPDGKYLI 206
           +G +L   N       GP  +  T DG  ++
Sbjct: 726 SGSFLSYINTSADPLYGPQGLALTSDGHVVV 756



 Score = 32.7 bits (73), Expect = 0.36
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 16/142 (11%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG---- 192
           G  G    +F     V   + G++ +AD  N+ +Q+F  D     G + + F   G    
Sbjct: 504 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSND-----GQFKSRFGIRGRSPG 558

Query: 193 ----PSSVRFTPDGKYLIVAQLNLSRLSVVAAPP--VGSIGECSVISTIQLADQVLPHLL 246
               P+ V   P G  +I+A  +   +S+ ++       IG   ++    ++     H++
Sbjct: 559 QLQRPTGVAVHPSGD-IIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHII 617

Query: 247 EVDRKTGAVYVAEIGAKQVQKY 268
            VD K   V++ +   K V ++
Sbjct: 618 VVDNKACCVFIFQPNGKIVTRF 639



 Score = 32.0 bits (71), Expect = 0.62
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWL------GAWNNCFTE 190
           G  G G  +F  PH   ++S   + + D  N  ++VF+++ GE++      G  N  F  
Sbjct: 640 GSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQE-GEFMLKFGSNGEGNGQF-- 696

Query: 191 EGPSSVRFTPDGKYLIVAQLNLSRLSV 217
             P+ V    +G  +IVA    SR+ V
Sbjct: 697 NAPTGVAVDSNGN-IIVADWGNSRIQV 722


>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 128 SDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNC 187
           +D   L+  G +G G  +FN P  V +DS G + VAD GN RIQVFD  +G +L   N  
Sbjct: 651 ADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD-SSGSFLSYINTS 709

Query: 188 FTE-EGPSSVRFTPDGKYLI 206
                GP  +  T DG  ++
Sbjct: 710 AEPLYGPQGLALTSDGHVVV 729



 Score = 31.6 bits (70), Expect = 0.81
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 20/144 (13%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG---- 192
           G  G    +F     V+  S+GR+ VAD  N+ IQVF  +     G +   F   G    
Sbjct: 477 GSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNE-----GQFKFRFGVRGRSPG 531

Query: 193 ----PSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVG----SIGECSVISTIQLADQVLPH 244
               P+ V    +G  +IVA  +   +S+ +  P G     IG   ++    +A     H
Sbjct: 532 QLQRPTGVAVDTNGD-IIVADYDNRWVSIFS--PEGKFKTKIGAGRLMGPKGVAVDRNGH 588

Query: 245 LLEVDRKTGAVYVAEIGAKQVQKY 268
           ++ VD K+  V+  +   K V ++
Sbjct: 589 IIVVDNKSCCVFTFQPNGKLVGRF 612


>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 128 SDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNC 187
           +D   L+  G +G G  +FN P  V +DS G + VAD GN RIQVFD  +G +L   N  
Sbjct: 651 ADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD-SSGSFLSYINTS 709

Query: 188 FTE-EGPSSVRFTPDGKYLI 206
                GP  +  T DG  ++
Sbjct: 710 AEPLYGPQGLALTSDGHVVV 729



 Score = 31.6 bits (70), Expect = 0.81
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 20/144 (13%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG---- 192
           G  G    +F     V+  S+GR+ VAD  N+ IQVF  +     G +   F   G    
Sbjct: 477 GSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNE-----GQFKFRFGVRGRSPG 531

Query: 193 ----PSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVG----SIGECSVISTIQLADQVLPH 244
               P+ V    +G  +IVA  +   +S+ +  P G     IG   ++    +A     H
Sbjct: 532 QLQRPTGVAVDTNGD-IIVADYDNRWVSIFS--PEGKFKTKIGAGRLMGPKGVAVDRNGH 588

Query: 245 LLEVDRKTGAVYVAEIGAKQVQKY 268
           ++ VD K+  V+  +   K V ++
Sbjct: 589 IIVVDNKSCCVFTFQPNGKLVGRF 612


>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
          Length = 653

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDK 175
           G  G+ P  FN+P S+ + S G V VADRGN RIQVF +
Sbjct: 362 GAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTR 400


>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
          Length = 653

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDK 175
           G  G+ P  FN+P S+ + S G V VADRGN RIQVF +
Sbjct: 362 GAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTR 400


>gi|21070984 peptidylglycine alpha-amidating monooxygenase isoform a
           preproprotein [Homo sapiens]
          Length = 974

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 91  TEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWIT-DVGSDFMILWLHGENGTG----PAK 145
           ++  +F +  +  VD   G    S  Y  S  +       F+  W  GE  +G    P +
Sbjct: 625 SDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQW--GEESSGSSPLPGQ 682

Query: 146 FNIPHSVTL-DSAGRVWVADRGNKRIQVFDKDTGEWL 181
           F +PHS+ L    G++ VADR N RIQ F  DT E++
Sbjct: 683 FTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFV 719


>gi|21070982 peptidylglycine alpha-amidating monooxygenase isoform d
           preproprotein [Homo sapiens]
          Length = 887

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 91  TEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWIT-DVGSDFMILWLHGENGTG----PAK 145
           ++  +F +  +  VD   G    S  Y  S  +       F+  W  GE  +G    P +
Sbjct: 625 SDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQW--GEESSGSSPLPGQ 682

Query: 146 FNIPHSVTL-DSAGRVWVADRGNKRIQVFDKDTGEWL 181
           F +PHS+ L    G++ VADR N RIQ F  DT E++
Sbjct: 683 FTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFV 719


>gi|21070980 peptidylglycine alpha-amidating monooxygenase isoform c
           preproprotein [Homo sapiens]
          Length = 866

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 91  TEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWIT-DVGSDFMILWLHGENGTG----PAK 145
           ++  +F +  +  VD   G    S  Y  S  +       F+  W  GE  +G    P +
Sbjct: 518 SDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQW--GEESSGSSPLPGQ 575

Query: 146 FNIPHSVTL-DSAGRVWVADRGNKRIQVFDKDTGEWL 181
           F +PHS+ L    G++ VADR N RIQ F  DT E++
Sbjct: 576 FTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFV 612


>gi|21070974 peptidylglycine alpha-amidating monooxygenase isoform b
           preproprotein [Homo sapiens]
          Length = 905

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 91  TEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWIT-DVGSDFMILWLHGENGTG----PAK 145
           ++  +F +  +  VD   G    S  Y  S  +       F+  W  GE  +G    P +
Sbjct: 625 SDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQW--GEESSGSSPLPGQ 682

Query: 146 FNIPHSVTL-DSAGRVWVADRGNKRIQVFDKDTGEWL 181
           F +PHS+ L    G++ VADR N RIQ F  DT E++
Sbjct: 683 FTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFV 719


>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
          Length = 755

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 97  LRAWNYTVDTPHGIFAASTLYEQSVWITD----VGSDFMILWLHGENGTGPAKFNIPHSV 152
           LRA  +   +P G F  S   + SV I D    V  ++    LHG           P SV
Sbjct: 634 LRALVFLTTSPQGHFVGSDWQQNSVVICDGLGQVVGEYKGPGLHGCQ---------PGSV 684

Query: 153 TLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLN 211
           ++D  G +++  R   ++ + D   G  LG +   +       V    DG+YL+V+  N
Sbjct: 685 SVDKKGYIFLTLREVNKVVILD-PKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSN 742


>gi|6005757 chromatin-specific transcription elongation factor large
           subunit [Homo sapiens]
          Length = 1047

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 165 RGNKRIQVFDKDT--GEWLGAWNNCFTEEGPSSVRFTPDGKYLIV----AQLNLSR 214
           +  K+I VF KD   GE++ +WN+C  +EG   +  +    Y I      +LNL +
Sbjct: 129 KNGKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAVKEDGELNLMK 184


>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
          Length = 1306

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 10/99 (10%)

Query: 97  LRAWNYTVDTPHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDS 156
           L A NY  D P     +   +  S  +T   S   + W  G  G  PA  N    + +D 
Sbjct: 23  LTATNYNCDDPLASLLSPMAFSSSSDLTGTHSPAQLNWRVGTGGWSPADSNAQQWLQMDL 82

Query: 157 AGRV---WVADRGNKRIQVFDKDTGEWLGAWNNCFTEEG 192
             RV    VA +G          + +W+ +++  F++ G
Sbjct: 83  GNRVEITAVATQGR-------YGSSDWVTSYSLMFSDTG 114


>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
          Length = 2769

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 144  AKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKD 176
            AK N P S+ + + G ++VAD GN RI+   K+
Sbjct: 1534 AKLNTPSSLAVCADGELYVADLGNIRIRFIRKN 1566


>gi|16554629 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 12/107 (11%)

Query: 107 PHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRG 166
           P      S  +++SV I DV +   +  L       PA  +   +V  +  G + V+   
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-------PAHSDPVSAVHFNRDGSLIVSSSY 191

Query: 167 NKRIQVFDKDTGEWLGAWNNCFTEEGP--SSVRFTPDGKYLIVAQLN 211
           +   +++D  +G+ L        ++ P  S V+F+P+GKY++ A L+
Sbjct: 192 DGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLD 235


>gi|16554627 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 12/107 (11%)

Query: 107 PHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRG 166
           P      S  +++SV I DV +   +  L       PA  +   +V  +  G + V+   
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTL-------PAHSDPVSAVHFNRDGSLIVSSSY 191

Query: 167 NKRIQVFDKDTGEWLGAWNNCFTEEGP--SSVRFTPDGKYLIVAQLN 211
           +   +++D  +G+ L        ++ P  S V+F+P+GKY++ A L+
Sbjct: 192 DGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLD 235


>gi|113865883 WD repeat domain 38 [Homo sapiens]
          Length = 314

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 156 SAGRVWVADRGNKR-IQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSR 214
           S   +W+A  G  R ++V+D +TG+ L         +   +  FTPDGK L+    + +R
Sbjct: 242 SPDELWLASAGYSRMVKVWDCNTGKCLETLKGVL--DVAHTCAFTPDGKILVSGAADQTR 299

Query: 215 LSV 217
             +
Sbjct: 300 RQI 302


>gi|40255283 NHL repeat containing 1 [Homo sapiens]
          Length = 395

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 137 GENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFD 174
           GE G        P  VT+ +   V V D G++ I+VFD
Sbjct: 165 GEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFD 202


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,288,934
Number of Sequences: 37866
Number of extensions: 494950
Number of successful extensions: 917
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 882
Number of HSP's gapped (non-prelim): 42
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.