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Search of human proteins with 62339432
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62339432 platelet receptor Gi24 [Homo sapiens]
(311 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62339432 platelet receptor Gi24 [Homo sapiens] 640 0.0
gi|7661534 CD274 molecule [Homo sapiens] 39 0.008
gi|14150145 matrix-remodelling associated 8 [Homo sapiens] 37 0.022
gi|14589893 cadherin 4, type 1 preproprotein [Homo sapiens] 35 0.065
gi|4759066 sodium channel, voltage-gated, type II, beta [Homo sa... 35 0.085
gi|28372555 sodium channel, voltage-gated, type IV, beta isoform... 35 0.085
gi|14589889 cadherin 2, type 1 preproprotein [Homo sapiens] 35 0.11
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 35 0.11
gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens] 34 0.15
gi|215272334 sodium channel, voltage-gated, type IV, beta isofor... 34 0.19
gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens] 34 0.19
gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens] 34 0.19
gi|51242941 G6f protein [Homo sapiens] 34 0.19
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.32
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 33 0.42
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 33 0.42
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 33 0.42
gi|73476377 LBXCOR1 homolog [Homo sapiens] 33 0.42
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 33 0.42
gi|7706501 WW domain binding protein 11 [Homo sapiens] 33 0.42
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 32 0.55
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 32 0.55
gi|24308251 bile acid beta-glucosidase [Homo sapiens] 32 0.72
gi|150417989 cyclin K isoform 1 [Homo sapiens] 32 0.72
gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens] 32 0.94
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 32 0.94
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 31 1.2
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 31 1.2
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 31 1.2
gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens] 31 1.2
>gi|62339432 platelet receptor Gi24 [Homo sapiens]
Length = 311
Score = 640 bits (1651), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MGVPTALEAGSWRWGSLLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPV 60
MGVPTALEAGSWRWGSLLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPV
Sbjct: 1 MGVPTALEAGSWRWGSLLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPV 60
Query: 61 DKGHDVTFYKTWYRSSRGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLE 120
DKGHDVTFYKTWYRSSRGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLE
Sbjct: 61 DKGHDVTFYKTWYRSSRGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLE 120
Query: 121 SASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVV 180
SASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVV
Sbjct: 121 SASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVV 180
Query: 181 YPSSSQDSENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNIQGI 240
YPSSSQDSENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNIQGI
Sbjct: 181 YPSSSQDSENITAAALATGACIVGILCLPLILLLVYKQRQAASNRRAQELVRMDSNIQGI 240
Query: 241 ENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLD 300
ENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLD
Sbjct: 241 ENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLD 300
Query: 301 PVPDSPNFEVI 311
PVPDSPNFEVI
Sbjct: 301 PVPDSPNFEVI 311
>gi|7661534 CD274 molecule [Homo sapiens]
Length = 290
Score = 38.5 bits (88), Expect = 0.008
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 18 LFALFLAASLGPVA-AFKVATPYSLYVCPEGQNVTLTCRLLGPVDKGHDV-TFYKTWYRS 75
+FA+F+ + + AF V P LYV G N+T+ C+ PV+K D+ W
Sbjct: 3 IFAVFIFMTYWHLLNAFTVTVPKDLYVVEYGSNMTIECKF--PVEKQLDLAALIVYWEME 60
Query: 76 SRGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLESASDHHGNFSITMRN 135
+ +Q +DL + H ++ QR L GN ++ + +
Sbjct: 61 DKNIIQFVHGE--------EDLKVQHSSYR---------QRARLLKDQLSLGNAALQITD 103
Query: 136 LTLLDSGLYCCLV 148
+ L D+G+Y C++
Sbjct: 104 VKLQDAGVYRCMI 116
>gi|14150145 matrix-remodelling associated 8 [Homo sapiens]
Length = 442
Score = 37.0 bits (84), Expect = 0.022
Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 20/158 (12%)
Query: 21 LFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTC---RLLGPVDKGHDVTFYKTWYRSSR 77
L + S P AA S G L C R++ D+ HD W
Sbjct: 21 LLHSGSSVPAAAGSSVVSESAVSWEAGARAVLRCQSPRMVWTQDRLHDRQRVLHWDLRGP 80
Query: 78 GEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLESASDHHGNFSITMRNLT 137
G P R L L L+ G Q + D + SA D GNFS+ +R +
Sbjct: 81 GG-------GPARRL----LDLYSAGEQRVYEARDRGRLELSASAFDD-GNFSLLIRAVE 128
Query: 138 LLDSGLYCCLVVEIRHHHSEHRVHG-AMELQVQTGKDA 174
D+GLY C + HHH H A+ L+V G A
Sbjct: 129 ETDAGLYTCNL----HHHYCHLYESLAVRLEVTDGPPA 162
>gi|14589893 cadherin 4, type 1 preproprotein [Homo sapiens]
Length = 916
Score = 35.4 bits (80), Expect = 0.065
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 191 ITAAALATGACIVGILC----LPLILLLVYKQRQAASNRRAQEL------------VRMD 234
+ AA L TGA + ++C L ++LL V ++ R ++L ++ D
Sbjct: 725 VAAAGLGTGAIVAILICILILLTMVLLFVMWMKRREKERHTKQLLIDPEDDVRDNILKYD 784
Query: 235 SNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSP--PGPG 292
G E+ ++ S Q PEA P R+ E R + +EP P+ P P PG
Sbjct: 785 EEGGGEEDQDYDLSQLQQ--PEAMGHVPSKAPGVRRVDE--RPVGAEPQYPIRPMVPHPG 840
Query: 293 DV 294
D+
Sbjct: 841 DI 842
>gi|4759066 sodium channel, voltage-gated, type II, beta [Homo
sapiens]
Length = 215
Score = 35.0 bits (79), Expect = 0.085
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 130 SITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVVYPSSSQDSE 189
S+ +RN+ D G+Y C ++ + HR HG + LQV + E
Sbjct: 111 SVMLRNVQPEDEGIYNCYIM---NPPDRHRGHGKIHLQV--------------LMEEPPE 153
Query: 190 NITAAALATGACIVGILCLPLILLLVYK 217
+ A+ GA + G L + +++L+V K
Sbjct: 154 RDSTVAVIVGASVGGFLAVVILVLMVVK 181
>gi|28372555 sodium channel, voltage-gated, type IV, beta isoform 1
precursor [Homo sapiens]
Length = 228
Score = 35.0 bits (79), Expect = 0.085
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 18/136 (13%)
Query: 121 SASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVV 180
S + N SI +R+L D+G Y C V + ++ +H H + LQV + N
Sbjct: 106 STKEKMNNISIVLRDLEFSDTGKYTCHVKNPKENNLQH--HATIFLQVVDRLEEVDN--- 160
Query: 181 YPSSSQDSENITAAALATGACIVGILCLPL----ILLLVYKQRQAASNRRAQELVRMDSN 236
+T LA ++G+L L L +++ + K+ + D+
Sbjct: 161 ---------TVTLIILAVVGGVIGLLILILLIKKLIIFILKKTREKKKECLVSSSGNDNT 211
Query: 237 IQGIENPGFEASPPAQ 252
G+ E PP++
Sbjct: 212 ENGLPGSKAEEKPPSK 227
>gi|14589889 cadherin 2, type 1 preproprotein [Homo sapiens]
Length = 906
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 187 DSENITAAALATGACIVGILCLPLILLLVY----------KQRQA------ASNRRAQEL 230
D + I A L TGA I +LC+ ++L+LV K+RQA + +
Sbjct: 711 DVDRIVGAGLGTGAIIAILLCIIILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNI 770
Query: 231 VRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPL--SP 288
++ D G E+ ++ S Q P+ + V R+ E R + +EP P+ +
Sbjct: 771 LKYDEEGGGEEDQDYDLSQLQQ--PDTVEPDAIKPVGIRRMDE--RPIHAEPQYPVRSAA 826
Query: 289 PGPGDV 294
P PGD+
Sbjct: 827 PHPGDI 832
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 21 LFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPVDKGHDVTFYKTWYRSSRGEV 80
L L+ G V+ +V P G NVTL C V ++ +++
Sbjct: 10 LILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFFHKK---- 65
Query: 81 QTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLESASDHHGNFSITMRNLTLLD 140
E PI ++ GG A + Q + S+ GN SIT+ ++ D
Sbjct: 66 ----EMEPI------SIYFSQGGQAVA-----IGQFKDRITGSNDPGNASITISHMQPAD 110
Query: 141 SGLYCC 146
SG+Y C
Sbjct: 111 SGIYIC 116
>gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]
Length = 301
Score = 34.3 bits (77), Expect = 0.15
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 127 GNFSITMRNLTLLDSGLYCCLV 148
G+ S+T+ N+TL DSG+YCC +
Sbjct: 91 GDVSLTIENVTLADSGIYCCRI 112
>gi|215272334 sodium channel, voltage-gated, type IV, beta isoform 3
[Homo sapiens]
Length = 118
Score = 33.9 bits (76), Expect = 0.19
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 128 NFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAMELQVQTGKDAPSNCVVYPSSSQD 187
N SI +R+L D+G Y C V + ++ +H H + LQV + N
Sbjct: 3 NISIVLRDLEFSDTGKYTCHVKNPKENNLQH--HATIFLQVVDRLEEVDN---------- 50
Query: 188 SENITAAALATGACIVGILCLPL----ILLLVYKQRQAASNRRAQELVRMDSNIQGIENP 243
+T LA ++G+L L L +++ + K+ + D+ G+
Sbjct: 51 --TVTLIILAVVGGVIGLLILILLIKKLIIFILKKTREKKKECLVSSSGNDNTENGLPGS 108
Query: 244 GFEASPPAQ 252
E PP++
Sbjct: 109 KAEEKPPSK 117
>gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens]
Length = 781
Score = 33.9 bits (76), Expect = 0.19
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 39/127 (30%)
Query: 190 NITAAALATGA------CIVGILCLPLILLLVYKQRQAASNRRAQELVRMD--------- 234
+++AA L+TGA C+ +L L ++ + + +Q+Q A +E VR +
Sbjct: 593 HLSAAGLSTGALLAIITCVGALLALVVLFVALRRQKQEALMVLEEEDVRENIITYDDEGG 652
Query: 235 -------SNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLS 287
+I ++NP A+PPA G P + P + V+ RQP
Sbjct: 653 GEEDTEAFDITALQNPD-GAAPPAPGPPARRDVLPRARVS-RQP---------------R 695
Query: 288 PPGPGDV 294
PPGP DV
Sbjct: 696 PPGPADV 702
>gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]
Length = 819
Score = 33.9 bits (76), Expect = 0.19
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 39/127 (30%)
Query: 190 NITAAALATGA------CIVGILCLPLILLLVYKQRQAASNRRAQELVRMD--------- 234
+++AA L+TGA C+ +L L ++ + + +Q+Q A +E VR +
Sbjct: 631 HLSAAGLSTGALLAIITCVGALLALVVLFVALRRQKQEALMVLEEEDVRENIITYDDEGG 690
Query: 235 -------SNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLS 287
+I ++NP A+PPA G P + P + V+ RQP
Sbjct: 691 GEEDTEAFDITALQNPD-GAAPPAPGPPARRDVLPRARVS-RQP---------------R 733
Query: 288 PPGPGDV 294
PPGP DV
Sbjct: 734 PPGPADV 740
>gi|51242941 G6f protein [Homo sapiens]
Length = 297
Score = 33.9 bits (76), Expect = 0.19
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 118 GLESASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAM-----ELQVQTGK 172
G ES GN+S+ + D+G Y C V+ H++ RV+ + +L +
Sbjct: 78 GRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGSQLSARAAD 137
Query: 173 DAPSN---CVVYPSSSQDS 188
+P N C V PS DS
Sbjct: 138 GSPCNVLLCSVVPSRRMDS 156
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.32
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 247 ASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLDPVPDSP 306
ASPP QG+P + + Q P + L + PS P SPP P P P +P
Sbjct: 599 ASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPP-----LSPLATPSPQAP 653
Query: 307 N 307
N
Sbjct: 654 N 654
Score = 29.6 bits (65), Expect = 3.6
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 243 PGFEASPPAQGIPEAKVRHPLSYVA---QRQPSESGRHLLSEP-STPLSPPGPGDVFFPS 298
P A PP Q P PLS +A + P+ HLL P S P SPP P+
Sbjct: 622 PPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 681
Query: 299 LDPVPDS 305
PV S
Sbjct: 682 SPPVSPS 688
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 187 DSENITAAALATGACIVGILCLP--LILLLVYKQRQAASNRRAQELVRMDSNIQGIENPG 244
+S T AL A I+ + C+P L++L+ Y+QRQA + A+ + + + P
Sbjct: 1346 ESLGYTEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPA 1405
Query: 245 FEASPP 250
A+PP
Sbjct: 1406 PVAAPP 1411
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 187 DSENITAAALATGACIVGILCLP--LILLLVYKQRQAASNRRAQELVRMDSNIQGIENPG 244
+S T AL A I+ + C+P L++L+ Y+QRQA + A+ + + + P
Sbjct: 1331 ESLGYTEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPA 1390
Query: 245 FEASPP 250
A+PP
Sbjct: 1391 PVAAPP 1396
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 187 DSENITAAALATGACIVGILCLP--LILLLVYKQRQAASNRRAQELVRMDSNIQGIENPG 244
+S T AL A I+ + C+P L++L+ Y+QRQA + A+ + + + P
Sbjct: 1368 ESLGYTEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPA 1427
Query: 245 FEASPP 250
A+PP
Sbjct: 1428 PVAAPP 1433
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 32.7 bits (73), Expect = 0.42
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 11/69 (15%)
Query: 239 GIENPGFEASPPAQGIP-------EAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGP 291
G P PP G P E VR P + PS G + L EP PL P P
Sbjct: 671 GSPRPRRRLGPPPAGRPAFGDLAAEDLVRRP----ERSPPSGGGGYELREPCGPLGGPAP 726
Query: 292 GDVFFPSLD 300
VF P D
Sbjct: 727 AKVFAPERD 735
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 32.7 bits (73), Expect = 0.42
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 243 PGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLDPV 302
P ASPP + P+ +V P S V P+ S L+PPGP P D
Sbjct: 1925 PSRWASPPLKTSPQLRVPPPTSVVTALTPT----------SGELAPPGPAPSPPPPEDLG 1974
Query: 303 PDSPNFEVI 311
PD + EV+
Sbjct: 1975 PDFEDMEVV 1983
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 32.7 bits (73), Expect = 0.42
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 223 SNRRAQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEP 282
+ +++Q+ + +S+ G + P Q +P ++++ P P L P
Sbjct: 366 AEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAP--------PMPGPPPLGPPP 417
Query: 283 STPLSPPGPGDVFFPSLDPVPDSPNF 308
+ PL PPGP P P P +P F
Sbjct: 418 APPLRPPGPPTGLPPG--PPPGAPPF 441
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 32.3 bits (72), Expect = 0.55
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 155 HSEHRVHGAMELQVQTGKDAPSNCVVYPSSSQDS----ENITAAALATGACIVGILCLPL 210
++E+ V+ E Q K A V+ +S+Q + + L+TGA IVGIL +
Sbjct: 667 NAEYEVYVVAENQQGKSKAAH---FVFRTSAQPTAIPANGSPTSGLSTGA-IVGILIVIF 722
Query: 211 ILLLVYKQRQAASNRRAQELVRMDSNIQGIENPGFEASPPAQG---IPEAKVRHPLSYVA 267
+LLLV + + + N+ G PG + +G + + + P+ V
Sbjct: 723 VLLLVVVDITCYFLNKCGLFMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVR 782
Query: 268 ---QRQPS-ESGRHLLSEPSTPLSPPGPGDV 294
+R P+ + G+H +TPL+ P G V
Sbjct: 783 TEEERTPNHDGGKHTEPNETTPLTEPEKGPV 813
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 32.3 bits (72), Expect = 0.55
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 155 HSEHRVHGAMELQVQTGKDAPSNCVVYPSSSQDS----ENITAAALATGACIVGILCLPL 210
++E+ V+ E Q K A V+ +S+Q + + L+TGA IVGIL +
Sbjct: 677 NAEYEVYVVAENQQGKSKAAH---FVFRTSAQPTAIPANGSPTSGLSTGA-IVGILIVIF 732
Query: 211 ILLLVYKQRQAASNRRAQELVRMDSNIQGIENPGFEASPPAQG---IPEAKVRHPLSYVA 267
+LLLV + + + N+ G PG + +G + + + P+ V
Sbjct: 733 VLLLVVVDITCYFLNKCGLFMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVR 792
Query: 268 ---QRQPS-ESGRHLLSEPSTPLSPPGPGDV 294
+R P+ + G+H +TPL+ P G V
Sbjct: 793 TEEERTPNHDGGKHTEPNETTPLTEPEKGPV 823
>gi|24308251 bile acid beta-glucosidase [Homo sapiens]
Length = 927
Score = 32.0 bits (71), Expect = 0.72
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 9/50 (18%)
Query: 11 SWRWGSLLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPV 60
SW WG + F A L P A +++Y P GQNVTLTCR + P+
Sbjct: 216 SWNWGLCGYFAFYHA-LYPRA-------WTVYQLP-GQNVTLTCRQITPI 256
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 32.0 bits (71), Expect = 0.72
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 241 ENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPLSPPGPGDVFFPSLD 300
E P + A PPA G P HP Y P S P + PP PG +P
Sbjct: 454 EGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPG---YPP-P 509
Query: 301 PVPDSPNF 308
P +PNF
Sbjct: 510 PPTYNPNF 517
>gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens]
Length = 273
Score = 31.6 bits (70), Expect = 0.94
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 17 LLFALFLAASLGPVAA-FKVATPYSLYVCPEGQNVTLTC 54
LL L L L +AA F V P LY+ G NVTL C
Sbjct: 4 LLLMLSLELQLHQIAALFTVTVPKELYIIEHGSNVTLEC 42
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 31.6 bits (70), Expect = 0.94
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 17 LLFALFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTCRLLGPVDKGHDVTFYKTWYRSS 76
LL L L+ A F V P + + G+N TL C L P D+ W+RS
Sbjct: 18 LLLLLLLSLCALVSAQFTVVGPANPILAMVGENTTLRCH-LSPEKNAEDMEV--RWFRSQ 74
Query: 77 RGEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHG---LESASDHHGNFSITM 133
+ ++ GG + T + + G S + G+ ++ +
Sbjct: 75 FSPA----------------VFVYKGGRE--RTEEQMEEYRGRITFVSKDINRGSVALVI 116
Query: 134 RNLTLLDSGLYCCLVVEIRHH 154
N+T ++G+Y C E R +
Sbjct: 117 HNVTAQENGIYRCYFQEGRSY 137
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 31.2 bits (69), Expect = 1.2
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 217 KQRQAASNRRAQELVRMDSNIQGIENPGFEASP---PAQGIPEAKVRHPLSYVAQRQPSE 273
K+++ A RR ++ N++G+E+ EA PA+ + E L +A P E
Sbjct: 408 KEKEEAFQRRCH----LEPNVRGLESVDSEALARVGPAE-LSEGMPPSDLDLLAPAPPPE 462
Query: 274 SGRHLLSEPSTPLSPPGPGDVFFPSLDPVPDSP 306
L P+ PL PP P P D P +P
Sbjct: 463 EVLPLPPPPAPPLPPPPP-----PLPDKCPPAP 490
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 31.2 bits (69), Expect = 1.2
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 217 KQRQAASNRRAQELVRMDSNIQGIENPGFEASP---PAQGIPEAKVRHPLSYVAQRQPSE 273
K+++ A RR ++ N++G+E+ EA PA+ + E L +A P E
Sbjct: 459 KEKEEAFQRRCH----LEPNVRGLESVDSEALARVGPAE-LSEGMPPSDLDLLAPAPPPE 513
Query: 274 SGRHLLSEPSTPLSPPGPGDVFFPSLDPVPDSP 306
L P+ PL PP P P D P +P
Sbjct: 514 EVLPLPPPPAPPLPPPPP-----PLPDKCPPAP 541
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 31.2 bits (69), Expect = 1.2
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 238 QGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQP-------SESGRHLLSEPSTPLSPPG 290
Q + + G EA+P A P+A R+PL+ A+R P S L++P TP PP
Sbjct: 97 QQLGHGGPEAAPRA---PQALERYPLAAAAERPPRLGSDFGSSRPAASLAQPPTPQPPPV 153
Query: 291 PGDVF---FPSLDPVPD----SPN 307
G + F L+ P+ SPN
Sbjct: 154 NGILVPNGFSKLEEPPELNRQSPN 177
>gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]
Length = 703
Score = 31.2 bits (69), Expect = 1.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Query: 227 AQELVRMDSNIQGIENPGFEASPPAQGIPEAKVRHPLSYVAQRQPSESGRHLLSEPSTPL 286
AQE MD+ Q P E S + P+ SYV + Q S +LSEP L
Sbjct: 390 AQEEAAMDAGAQQNPQPSPEGSSVDKPTPQEVAFQLRSYVQRLQERRSLMKILSEPGPTL 449
Query: 287 SP 288
+P
Sbjct: 450 AP 451
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,560,269
Number of Sequences: 37866
Number of extensions: 674441
Number of successful extensions: 3238
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 3145
Number of HSP's gapped (non-prelim): 187
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.