Guide to the Human Genome
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Name: GBA2 Sequence: fasta or formatted (927aa) NCBI GI: 24308251
Description:

bile acid beta-glucosidase

Referenced in:

Bile Acids and Other Cholesterol Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         65           2
 C cysteine            2.5         23           2
 D aspartate           5.8         54           2
 E glutamate           5.3         49           2
 F phenylalanine       3.6         33           2
 G glycine             9.1         84           3
 H histidine           2.0         19           2
 I isoleucine          2.9         27           1
 K lysine              3.2         30           2
 L leucine             9.1         84           3
 M methionine          3.5         32           1
 N asparagine          2.8         26           2
 P proline             5.7         53           2
 Q glutamine           6.4         59           4
 R arginine            5.9         55           3
 S serine              5.4         50           3
 T threonine           5.5         51           2
 V valine              6.6         61           2
 W tryptophan          3.1         29           2
 Y tyrosine            4.6         43           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bile acid beta-glucosidase 
VNN3                  0.005   vanin 3 isoform 1 precursor 
BCMO1                 0.004   beta-carotene 15,15'-monooxygenase 
ASH1L                 0.004   absent, small, or homeotic 1-like 
C10orf54              0.004   platelet receptor Gi24 
SRCAP                 0.003   Snf2-related CBP activator protein 
MNX1                  0.003   homeo box HB9 
VNN1                  0.003   vanin 1 precursor 
LAMC2                 0.003   laminin, gamma 2 isoform b precursor 
LAMC2                 0.003   laminin, gamma 2 isoform a precursor 
LOC100288928          0.003   PREDICTED: hypothetical protein 
LOC100288928          0.003   PREDICTED: hypothetical protein XP_002342353 
ENAM                  0.003   enamelin 
SEZ6                  0.003   seizure related 6 homolog isoform 2 
SEZ6                  0.003   seizure related 6 homolog isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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