Search of human proteins with 61966689

Search of human proteins with 61966689

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61966689 hypothetical protein LOC541468 [Homo sapiens]
         (239 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61966689 hypothetical protein LOC541468 [Homo sapiens]             484   e-137
gi|42822876 hypothetical protein LOC286343 [Homo sapiens]             108   4e-24
gi|27532984 protein inhibitor of activated STAT X isoform alpha ...    33   0.17 
gi|56699458 protein inhibitor of activated STAT X isoform beta [...    33   0.17 
gi|167736355 mucin 4 isoform a [Homo sapiens]                          32   0.37 
gi|239758162 PREDICTED: heterogeneous nuclear ribonucleoprotein ...    31   1.1  
gi|239752620 PREDICTED: similar to heterogeneous nuclear ribonuc...    31   1.1  
gi|226052117 heterogeneous nuclear ribonucleoprotein C-like [Hom...    31   1.1  
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]         30   1.8  
gi|16936520 wingless-type MMTV integration site family, member 1...    29   3.2  
gi|239757861 PREDICTED: similar to armadillo repeat containing, ...    29   3.2  
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   3.2  
gi|239742514 PREDICTED: similar to Putative POM121-like protein ...    29   4.1  
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]                 29   4.1  
gi|117190254 heterogeneous nuclear ribonucleoprotein C isoform b...    28   5.4  
gi|117190192 heterogeneous nuclear ribonucleoprotein C isoform a...    28   5.4  
gi|117190174 heterogeneous nuclear ribonucleoprotein C isoform b...    28   5.4  
gi|117189975 heterogeneous nuclear ribonucleoprotein C isoform a...    28   5.4  
gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]            28   5.4  
gi|239755799 PREDICTED: hypothetical protein [Homo sapiens]            28   5.4  
gi|239750301 PREDICTED: hypothetical protein [Homo sapiens]            28   5.4  
gi|239744612 PREDICTED: hypothetical protein XP_002343207 [Homo ...    28   5.4  
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         28   5.4  
gi|118498339 EMI domain containing 2 [Homo sapiens]                    28   5.4  
gi|145275193 specifically androgen-regulated protein isoform 2 [...    28   5.4  
gi|145275189 specifically androgen-regulated protein isoform 1 [...    28   5.4  
gi|195963410 MEF2 activating motif and SAP domain containing tra...    28   7.0  
gi|32698970 MEF2 activating motif and SAP domain containing tran...    28   7.0  
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]      28   7.0  
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]              28   7.0  

>gi|61966689 hypothetical protein LOC541468 [Homo sapiens]
          Length = 239

 Score =  484 bits (1245), Expect = e-137
 Identities = 239/239 (100%), Positives = 239/239 (100%)

Query: 1   MEGTVESQTPDLRDVEGKVGRKTPEGLLRGLRGECELGTSGALLLPGASSTGHDLGDKIM 60
           MEGTVESQTPDLRDVEGKVGRKTPEGLLRGLRGECELGTSGALLLPGASSTGHDLGDKIM
Sbjct: 1   MEGTVESQTPDLRDVEGKVGRKTPEGLLRGLRGECELGTSGALLLPGASSTGHDLGDKIM 60

Query: 61  ALKMELAYLRAIDVKILQQLVTLNEGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPG 120
           ALKMELAYLRAIDVKILQQLVTLNEGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPG
Sbjct: 61  ALKMELAYLRAIDVKILQQLVTLNEGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPG 120

Query: 121 RSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGPPGAPRSEMDWAKVIAGGER 180
           RSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGPPGAPRSEMDWAKVIAGGER
Sbjct: 121 RSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGPPGAPRSEMDWAKVIAGGER 180

Query: 181 ARTEVDVAATRLGSLRAVWKPPGERLQGGPPESPEDESAKLGFEAHWFWEQCQDDVTFL 239
           ARTEVDVAATRLGSLRAVWKPPGERLQGGPPESPEDESAKLGFEAHWFWEQCQDDVTFL
Sbjct: 181 ARTEVDVAATRLGSLRAVWKPPGERLQGGPPESPEDESAKLGFEAHWFWEQCQDDVTFL 239


>gi|42822876 hypothetical protein LOC286343 [Homo sapiens]
          Length = 228

 Score =  108 bits (270), Expect = 4e-24
 Identities = 74/202 (36%), Positives = 105/202 (51%), Gaps = 52/202 (25%)

Query: 6   ESQTPDLRDVEGKVGRKTPEGLLRGLRGE------------------------CELGTSG 41
           +S  PDLRD+E K+GRK PE L+R LRGE                        C   +S 
Sbjct: 3   DSPLPDLRDIELKLGRKVPESLVRSLRGEEPVPRERDRDPCGGSGGGGGGGGGCSSSSSY 62

Query: 42  ALLLPGASSTGHD-----------------LGDKIMALKMELAYLRAIDVKILQQLVTLN 84
               P  SS+                    L  K+  L+ E+  LRA DV++++QL+ +N
Sbjct: 63  CSFPPSLSSSSSSSPTSGSPRGSHSSALERLETKLHLLRQEMVNLRATDVRLMRQLLVIN 122

Query: 85  EGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDSVSI 144
           E IE+++W++EE+ T+TS  SSL+ S  SL   S   S RGS++SL D S  D LD +S+
Sbjct: 123 ESIESIKWMIEEKATITSRGSSLSGSLCSLL-ESQSTSLRGSYNSLHDGS--DGLDGISV 179

Query: 145 GSFLDTVA--------PSELDE 158
           GS+LDT+A        PS+LD+
Sbjct: 180 GSYLDTLADDVPGHQTPSDLDQ 201


>gi|27532984 protein inhibitor of activated STAT X isoform alpha
           [Homo sapiens]
          Length = 572

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 102 SHCSSLTSSQYSLTGGS----PGRSRRGSWDSLPDTSTTDRLDSVSIGSFL--DTVAPSE 155
           S  S++ SS +SL GGS    P  +  G   SLP TS T    S  +GS L  DT    E
Sbjct: 73  SDLSTIKSSVFSLDGGSSPVEPDLAVAGI-HSLPSTSVTPHSPSSPVGSVLLQDTKPTFE 131

Query: 156 LDEQGPPGAP 165
           + +  PP  P
Sbjct: 132 MQQPSPPIPP 141


>gi|56699458 protein inhibitor of activated STAT X isoform beta
           [Homo sapiens]
          Length = 621

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 102 SHCSSLTSSQYSLTGGS----PGRSRRGSWDSLPDTSTTDRLDSVSIGSFL--DTVAPSE 155
           S  S++ SS +SL GGS    P  +  G   SLP TS T    S  +GS L  DT    E
Sbjct: 73  SDLSTIKSSVFSLDGGSSPVEPDLAVAGI-HSLPSTSVTPHSPSSPVGSVLLQDTKPTFE 131

Query: 156 LDEQGPPGAP 165
           + +  PP  P
Sbjct: 132 MQQPSPPIPP 141


>gi|167736355 mucin 4 isoform a [Homo sapiens]
          Length = 5284

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 81  VTLNEGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPGRSRRGSW-DSLPDTSTTDR 138
           +T+    ++     EE  T  +  S+  +S  S+T G  G+SR  SW  S+ DTS + +
Sbjct: 138 ITMTTSTDSTLGNTEETSTAGTESSTPVTSAVSITAGQEGQSRTTSWRTSIQDTSASSQ 196


>gi|239758162 PREDICTED: heterogeneous nuclear ribonucleoprotein
           C-like [Homo sapiens]
          Length = 293

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      +G+E      EE  T +
Sbjct: 168 GSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSS 227

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDS 141
           S     T  +    GG+      G  D L D    D+ D+
Sbjct: 228 SSKKDKTHVKMESEGGADDSVEEG--DLLCDDDNEDQGDN 265


>gi|239752620 PREDICTED: similar to heterogeneous nuclear
           ribonucleoprotein C-like [Homo sapiens]
          Length = 293

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      +G+E      EE  T +
Sbjct: 168 GSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSS 227

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDS 141
           S     T  +    GG+      G  D L D    D+ D+
Sbjct: 228 SSKKDKTHVKMESEGGADDSVEEG--DLLCDDDNEDQGDN 265


>gi|226052117 heterogeneous nuclear ribonucleoprotein C-like [Homo
           sapiens]
          Length = 293

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      +G+E      EE  T +
Sbjct: 168 GSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSS 227

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDS 141
           S     T  +    GG+      G  D L D    D+ D+
Sbjct: 228 SSKKDKTHVKMESEGGADDSVEEG--DLLCDDDNEDQGDN 265


>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
          Length = 1962

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 109 SSQYSLTGGSPGRSRRGSWDSLPDTSTT---DRLDSVSIGSFLDTVAPSELDEQGPPGAP 165
           +++ S +GGS        W+ L  TS+    + ++  +   + ++  P+     G P   
Sbjct: 869 ANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPTPSQGWGDPPKS 928

Query: 166 RSEMDW---AKVIAGGERARTEVDVAATRLGSLRAVWKPPGERLQGGPPESPEDESAKLG 222
              + W   +K ++  +  + +  V +   G   A  KPPG    GGP  +P  E    G
Sbjct: 929 NQSLGWGDSSKPVSSPDWNKQQDIVGSW--GIPPATGKPPGTGWLGGPIPAPAKEEEPTG 986

Query: 223 FE 224
           +E
Sbjct: 987 WE 988


>gi|16936520 wingless-type MMTV integration site family, member 10A
           precursor [Homo sapiens]
          Length = 417

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 203 GERLQGGPPESPEDESAKLGFEAHWFWEQCQDDVTF 238
           G+ L  G PE P   +A  G +  W W  C  D+ F
Sbjct: 185 GKGLSHGVPEHPALPTASPGLQDSWEWGGCSPDMGF 220


>gi|239757861 PREDICTED: similar to armadillo repeat containing,
            X-linked 4 [Homo sapiens]
          Length = 2382

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 116  GGSPGRSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGPPGAPRSEMDWAKVI 175
            G + G S  G  D     S  D  D  S GS L  V      +Q   GA    +D +   
Sbjct: 1426 GQASGGSMLGPEDQSSGRSWADTADQASGGSRLGHV------DQSSGGAWAGTLDQS--- 1476

Query: 176  AGGERARTEVDVAATRLGSLRAVWKPPGERLQGGPPESPEDESA 219
             GG + R E     T  GS    W   G +  GG    PED+S+
Sbjct: 1477 GGGSKPRFENQT--TEEGS----WAGAGGQAGGGSKVGPEDQSS 1514


>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 6 [Homo sapiens]
          Length = 1093

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 97  RGTLTSHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSEL 156
           +G  +   +S +SS  S + G P +    S  S PD S   +L+      +    AP+  
Sbjct: 319 KGVSSFTSASSSSSSSSSSSGGPFQPAVSSLQSSPDFSAFPKLEQPEEDKYSKPTAPAPS 378

Query: 157 DEQGP--PGAPRSEMDWAKVIAGG 178
               P  P  P++++   KV+  G
Sbjct: 379 APPSPSAPEPPKADLFEQKVVFSG 402


>gi|239742514 PREDICTED: similar to Putative POM121-like protein
           1-like [Homo sapiens]
          Length = 896

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 20/86 (23%)

Query: 101 TSHCSSLT-----SSQYSLTGGSPG-RSRRGSWD-------SLPDTSTTDRLDSVSIG-- 145
           TS  SS T     SS YS TGG PG + RRG          S   T + DR  +VS G  
Sbjct: 69  TSWTSSSTKRNAISSSYSSTGGLPGLKQRRGPASSRCQLTLSYSKTVSEDRPQAVSSGHT 128

Query: 146 ---SFLDTVAPSELDEQGPPGAPRSE 168
                 DT     L  +G  G+PRS+
Sbjct: 129 RCEKAADTAPGQTLAPRG--GSPRSQ 152


>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
          Length = 775

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 18/114 (15%)

Query: 75  KILQQLVTLNEGIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGS----PGRSRRGSWDSL 130
           ++LQ    L + + A + LL+E+  L +    L+ S  +  G +    PG +     DS+
Sbjct: 27  QLLQYQARLKDVVRAYKSLLKEKEALEASIKVLSVSHEADVGLAGVQLPGLTFP---DSV 83

Query: 131 PDTSTTDRLDSVSIGSFLDTVA-----------PSELDEQGPPGAPRSEMDWAK 173
            D  +T   DS    + LDT A             +   +GPP     E  W++
Sbjct: 84  DDRCSTHSEDSTGTATSLDTAASLTSTKGEFGVEDDRPARGPPPPKSEEASWSE 137


>gi|117190254 heterogeneous nuclear ribonucleoprotein C isoform b
           [Homo sapiens]
          Length = 293

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      + +E      EE  + +
Sbjct: 168 GSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKNDKSEEEQSSS 227

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLD 140
           S     T+ +    GG+   +  G  D L D    DR D
Sbjct: 228 SVKKDETNVKMESEGGADDSAEEG--DLLDDDDNEDRGD 264


>gi|117190192 heterogeneous nuclear ribonucleoprotein C isoform a
           [Homo sapiens]
          Length = 306

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      + +E      EE  + +
Sbjct: 181 GSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKNDKSEEEQSSS 240

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLD 140
           S     T+ +    GG+   +  G  D L D    DR D
Sbjct: 241 SVKKDETNVKMESEGGADDSAEEG--DLLDDDDNEDRGD 277


>gi|117190174 heterogeneous nuclear ribonucleoprotein C isoform b
           [Homo sapiens]
          Length = 293

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      + +E      EE  + +
Sbjct: 168 GSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKNDKSEEEQSSS 227

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLD 140
           S     T+ +    GG+   +  G  D L D    DR D
Sbjct: 228 SVKKDETNVKMESEGGADDSAEEG--DLLDDDDNEDRGD 264


>gi|117189975 heterogeneous nuclear ribonucleoprotein C isoform a
           [Homo sapiens]
          Length = 306

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 47  GASSTGHDLGDKIMALKMELAYLRAIDVKILQQLVTL-----NEGIEAVRWLLEERGTLT 101
           G+S +G   GD + A+K EL  ++     +L+ L  +      + +E      EE  + +
Sbjct: 181 GSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKNDKSEEEQSSS 240

Query: 102 SHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLD 140
           S     T+ +    GG+   +  G  D L D    DR D
Sbjct: 241 SVKKDETNVKMESEGGADDSAEEG--DLLDDDDNEDRGD 277


>gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 435

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 35  CELGTSGALLLPGASSTGHDLGDKIMALKMELAYLRAIDVK---ILQQLVTLNEG 86
           C++   G++   G+S  GH+L +K  A+K+ + +   I+V    ++  L+  +EG
Sbjct: 57  CQVNIQGSIKSQGSSDGGHNLANK--AVKVSVGWALDIEVSTTDVIDGLIVYHEG 109


>gi|239755799 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 146

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 35  CELGTSGALLLPGASSTGHDLGDKIMALKMELAYLRAIDVK---ILQQLVTLNEG 86
           C++   G++   G+S  GH+L +K  A+K+ + +   I+V    ++  L+  +EG
Sbjct: 57  CQVNIQGSIKSQGSSDGGHNLANK--AVKVSVGWALDIEVSTTDVIDGLIVYHEG 109


>gi|239750301 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 146

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 35  CELGTSGALLLPGASSTGHDLGDKIMALKMELAYLRAIDVK---ILQQLVTLNEG 86
           C++   G++   G+S  GH+L +K  A+K+ + +   I+V    ++  L+  +EG
Sbjct: 57  CQVNIQGSIKSQGSSDGGHNLANK--AVKVSVGWALDIEVSTTDVIDGLIVYHEG 109


>gi|239744612 PREDICTED: hypothetical protein XP_002343207 [Homo
           sapiens]
          Length = 146

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 35  CELGTSGALLLPGASSTGHDLGDKIMALKMELAYLRAIDVK---ILQQLVTLNEG 86
           C++   G++   G+S  GH+L +K  A+K+ + +   I+V    ++  L+  +EG
Sbjct: 57  CQVNIQGSIKSQGSSDGGHNLANK--AVKVSVGWALDIEVSTTDVIDGLIVYHEG 109


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 18/43 (41%), Positives = 22/43 (51%)

Query: 16   EGKVGRKTPEGLLRGLRGECELGTSGALLLPGASSTGHDLGDK 58
            E KV +++P GLLR  +G  E G S A   PGA        DK
Sbjct: 1918 EVKVRKRSPAGLLRPKKGLGEPGPSLAAPTPGARGPDPSSPDK 1960


>gi|118498339 EMI domain containing 2 [Homo sapiens]
          Length = 439

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 117 GSPG---RSRRGSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGPPGAP 165
           G+PG    S +G+  SL   +  D  DS    + +DTV       +GPPG P
Sbjct: 260 GNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPP 311


>gi|145275193 specifically androgen-regulated protein isoform 2
           [Homo sapiens]
          Length = 355

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 15/104 (14%)

Query: 128 DSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGP-PGAPRSEMDWAKVIAGGERARTEVD 186
           D+ P TST     S+  GSFLD ++PS L    P P +  +  D+A  I  G+ A  E +
Sbjct: 254 DASPKTST-----SLGKGSFLDKISPSVLRNSRPRPASLGTGKDFAG-IQVGKLADLEQE 307

Query: 187 VAATRLG----SLRAVWKPPGERL----QGGPPESPEDESAKLG 222
            ++ RL     S   + +PP   +    +G P E   +   KLG
Sbjct: 308 QSSKRLSYQGQSRDKLPRPPCVSVKISPKGVPNEHRREALKKLG 351


>gi|145275189 specifically androgen-regulated protein isoform 1
           [Homo sapiens]
          Length = 601

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 15/104 (14%)

Query: 128 DSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGP-PGAPRSEMDWAKVIAGGERARTEVD 186
           D+ P TST     S+  GSFLD ++PS L    P P +  +  D+A  I  G+ A  E +
Sbjct: 500 DASPKTST-----SLGKGSFLDKISPSVLRNSRPRPASLGTGKDFAG-IQVGKLADLEQE 553

Query: 187 VAATRLG----SLRAVWKPPGERL----QGGPPESPEDESAKLG 222
            ++ RL     S   + +PP   +    +G P E   +   KLG
Sbjct: 554 QSSKRLSYQGQSRDKLPRPPCVSVKISPKGVPNEHRREALKKLG 597


>gi|195963410 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 1 [Homo sapiens]
          Length = 415

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 125 GSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGP-PGAPRSEMDWAKVIAGG 178
           GS+D L  +  ++ L SV   S      PS  +   P P  P   +DW + ++GG
Sbjct: 333 GSFDVLSPSPDSEGLSSVFSSSL-----PSPTNSSSPSPRDPTDSLDWLEALSGG 382


>gi|32698970 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 2 [Homo sapiens]
          Length = 312

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 125 GSWDSLPDTSTTDRLDSVSIGSFLDTVAPSELDEQGP-PGAPRSEMDWAKVIAGG 178
           GS+D L  +  ++ L SV   S      PS  +   P P  P   +DW + ++GG
Sbjct: 230 GSFDVLSPSPDSEGLSSVFSSSL-----PSPTNSSSPSPRDPTDSLDWLEALSGG 279


>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
          Length = 1992

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 59   IMALKMELAYLRAIDVKILQ--QLVTLNEGIEAVRWLLEERGTLTSH 103
            I  +KM+  +L  +  K +   +LV L  G+   +W+L +  +LTSH
Sbjct: 1690 IAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSH 1736


>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
          Length = 882

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 86  GIEAVRWLLEERGTLTSHCSSLTSSQYSLTGGSPGRSRRGSWDSLPDTSTTDRLDSVSIG 145
           G  A  WL+  R    S      SS  S  G S    R G+   LP   +  R +     
Sbjct: 19  GFTAASWLIAPRVAELSERKRRGSSLCSYYGRSAAGPRAGAQQPLPQPQSRPRQE----- 73

Query: 146 SFLDTVAPSELDEQGPP 162
               +  P+  D QGPP
Sbjct: 74  ---QSPPPARQDLQGPP 87


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,923,256
Number of Sequences: 37866
Number of extensions: 522586
Number of successful extensions: 1501
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 53
length of query: 239
length of database: 18,247,518
effective HSP length: 99
effective length of query: 140
effective length of database: 14,498,784
effective search space: 2029829760
effective search space used: 2029829760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.