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Search of human proteins with 13540586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13540586 hypothetical protein LOC81556 isoform 2 [Homo
sapiens]
(518 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13540586 hypothetical protein LOC81556 isoform 2 [Homo sapiens] 1047 0.0
gi|209862887 hypothetical protein LOC81556 isoform 1 [Homo sapiens] 886 0.0
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 38 0.020
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 38 0.020
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 38 0.020
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 38 0.020
gi|7661890 sorting nexin 17 [Homo sapiens] 33 0.82
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... 32 1.4
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom... 32 1.4
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo... 32 1.4
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo... 32 1.4
gi|109715827 zinc finger protein 35 [Homo sapiens] 32 1.8
gi|62243769 signal transducing adaptor family member 2 isoform 2... 31 2.4
gi|62243734 signal transducing adaptor family member 2 isoform 1... 31 2.4
gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Hom... 30 4.1
gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Hom... 30 4.1
gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Hom... 30 4.1
gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens] 30 5.3
gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens] 30 5.3
gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens] 30 5.3
gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens] 30 5.3
gi|162287219 prune homolog 2 [Homo sapiens] 30 6.9
gi|150378498 fragile site-associated protein [Homo sapiens] 30 6.9
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 29 9.1
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 29 9.1
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 29 9.1
gi|221219000 phospholipase C-like 2 isoform 1 [Homo sapiens] 29 9.1
gi|163644311 phospholipase C-like 2 isoform 2 [Homo sapiens] 29 9.1
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 29 9.1
>gi|13540586 hypothetical protein LOC81556 isoform 2 [Homo sapiens]
Length = 518
Score = 1047 bits (2707), Expect = 0.0
Identities = 518/518 (100%), Positives = 518/518 (100%)
Query: 1 MPTVVVMDVSLSMTRPVSIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLW 60
MPTVVVMDVSLSMTRPVSIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLW
Sbjct: 1 MPTVVVMDVSLSMTRPVSIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLW 60
Query: 61 ELMVPFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAIPCQVVLVTDGCLG 120
ELMVPFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAIPCQVVLVTDGCLG
Sbjct: 61 ELMVPFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAIPCQVVLVTDGCLG 120
Query: 121 IGRGSLRHSLATQNQRSESNRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNN 180
IGRGSLRHSLATQNQRSESNRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNN
Sbjct: 121 IGRGSLRHSLATQNQRSESNRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNN 180
Query: 181 GEGQIFTIDGPLCLKNVQSMFGKLIGLAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEI 240
GEGQIFTIDGPLCLKNVQSMFGKLIGLAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEI
Sbjct: 181 GEGQIFTIDGPLCLKNVQSMFGKLIGLAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEI 240
Query: 241 DPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSAN 300
DPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSAN
Sbjct: 241 DPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSAN 300
Query: 301 QIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPL 360
QIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPL
Sbjct: 301 QIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPL 360
Query: 361 PWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKIL 420
PWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKIL
Sbjct: 361 PWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKIL 420
Query: 421 RNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLT 480
RNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLT
Sbjct: 421 RNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLT 480
Query: 481 HAAQQLKLASTGTSEYAAYDQNITPLHTDFSGSSTERI 518
HAAQQLKLASTGTSEYAAYDQNITPLHTDFSGSSTERI
Sbjct: 481 HAAQQLKLASTGTSEYAAYDQNITPLHTDFSGSSTERI 518
>gi|209862887 hypothetical protein LOC81556 isoform 1 [Homo sapiens]
Length = 439
Score = 886 bits (2290), Expect = 0.0
Identities = 437/439 (99%), Positives = 437/439 (99%)
Query: 80 MDDYDKTCLGSALVGVCNIVQQEWGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSES 139
MDDYDKTCL SALVGVCNIVQQEWGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSES
Sbjct: 1 MDDYDKTCLESALVGVCNIVQQEWGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSES 60
Query: 140 NRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQS 199
NRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQS
Sbjct: 61 NRFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQS 120
Query: 200 MFGKLIGLAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEIDPIPKVINTDLEIVGFIDI 259
MFGKLI LAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEIDPIPKVINTDLEIVGFIDI
Sbjct: 121 MFGKLIDLAYTPFHAVLKCGHLTADVQVFPRPEPFVVDEEIDPIPKVINTDLEIVGFIDI 180
Query: 260 ADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSANQIAGKIPNFCVLLHGSLKV 319
ADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSANQIAGKIPNFCVLLHGSLKV
Sbjct: 181 ADISSPPVLSRHLVLPIALNKEGDEVGTGITDDNEDENSANQIAGKIPNFCVLLHGSLKV 240
Query: 320 EGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENP 379
EGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENP
Sbjct: 241 EGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENP 300
Query: 380 YGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNR 439
YGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNR
Sbjct: 301 YGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNR 360
Query: 440 LRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLTHAAQQLKLASTGTSEYAAY 499
LRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLTHAAQQLKLASTGTSEYAAY
Sbjct: 361 LRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLTHAAQQLKLASTGTSEYAAY 420
Query: 500 DQNITPLHTDFSGSSTERI 518
DQNITPLHTDFSGSSTERI
Sbjct: 421 DQNITPLHTDFSGSSTERI 439
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 366 MAQLGPISDAKENPYGEDDNKS---PFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKI--- 419
MA+ P D + + + ED + S P P KN Y+ +T+W + +Q +K+
Sbjct: 1 MAEAAPARDPETDKHTEDQSPSTPLPQPAAEKNSYLYSTEITLWTVVAAIQALEKKVDSC 60
Query: 420 LRNARKLPEKTQTFYKELNRLRKAALAFG 448
L L +T T K+L K A+ FG
Sbjct: 61 LTRLLTLEGRTGTAEKKLADCEKTAVEFG 89
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 366 MAQLGPISDAKENPYGEDDNKS---PFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKI--- 419
MA+ P D + + + ED + S P P KN Y+ +T+W + +Q +K+
Sbjct: 1 MAEAAPARDPETDKHTEDQSPSTPLPQPAAEKNSYLYSTEITLWTVVAAIQALEKKVDSC 60
Query: 420 LRNARKLPEKTQTFYKELNRLRKAALAFG 448
L L +T T K+L K A+ FG
Sbjct: 61 LTRLLTLEGRTGTAEKKLADCEKTAVEFG 89
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 366 MAQLGPISDAKENPYGEDDNKS---PFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKI--- 419
MA+ P D + + + ED + S P P KN Y+ +T+W + +Q +K+
Sbjct: 1 MAEAAPARDPETDKHTEDQSPSTPLPQPAAEKNSYLYSTEITLWTVVAAIQALEKKVDSC 60
Query: 420 LRNARKLPEKTQTFYKELNRLRKAALAFG 448
L L +T T K+L K A+ FG
Sbjct: 61 LTRLLTLEGRTGTAEKKLADCEKTAVEFG 89
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 366 MAQLGPISDAKENPYGEDDNKS---PFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKI--- 419
MA+ P D + + + ED + S P P KN Y+ +T+W + +Q +K+
Sbjct: 1 MAEAAPARDPETDKHTEDQSPSTPLPQPAAEKNSYLYSTEITLWTVVAAIQALEKKVDSC 60
Query: 420 LRNARKLPEKTQTFYKELNRLRKAALAFG 448
L L +T T K+L K A+ FG
Sbjct: 61 LTRLLTLEGRTGTAEKKLADCEKTAVEFG 89
>gi|7661890 sorting nexin 17 [Homo sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 0.82
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 421 RNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLT 480
R + L EK KE RL + +G+L VAD E++C ++ + + + QL
Sbjct: 245 RQLKSLQEKVSK--KEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLR 302
Query: 481 HAAQQLKLAS 490
QQL+ S
Sbjct: 303 LPGQQLREGS 312
>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
sapiens]
Length = 841
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 269 SRHLVLPIALNKEGDEVGT-GITDDNEDENSANQIAGKIPNFCVLLHG--SLKVEGMVAI 325
S+ P A +G++ T +T ++E S +A +P ++ + S ++ +V+
Sbjct: 16 SKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVST 75
Query: 326 VQLGPEWHGMLYSQADSKKKSNLMMSLF 353
+Q +W +L SQ + ++N + SL+
Sbjct: 76 IQQDADWDSVLSSQQRMESENNKLCSLY 103
>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
sapiens]
Length = 801
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 269 SRHLVLPIALNKEGDEVGT-GITDDNEDENSANQIAGKIPNFCVLLHG--SLKVEGMVAI 325
S+ P A +G++ T +T ++E S +A +P ++ + S ++ +V+
Sbjct: 3 SKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVST 62
Query: 326 VQLGPEWHGMLYSQADSKKKSNLMMSLF 353
+Q +W +L SQ + ++N + SL+
Sbjct: 63 IQQDADWDSVLSSQQRMESENNKLCSLY 90
>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
sapiens]
Length = 804
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 269 SRHLVLPIALNKEGDEVGT-GITDDNEDENSANQIAGKIPNFCVLLHG--SLKVEGMVAI 325
S+ P A +G++ T +T ++E S +A +P ++ + S ++ +V+
Sbjct: 6 SKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVST 65
Query: 326 VQLGPEWHGMLYSQADSKKKSNLMMSLF 353
+Q +W +L SQ + ++N + SL+
Sbjct: 66 IQQDADWDSVLSSQQRMESENNKLCSLY 93
>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
sapiens]
Length = 808
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 269 SRHLVLPIALNKEGDEVGT-GITDDNEDENSANQIAGKIPNFCVLLHG--SLKVEGMVAI 325
S+ P A +G++ T +T ++E S +A +P ++ + S ++ +V+
Sbjct: 3 SKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVST 62
Query: 326 VQLGPEWHGMLYSQADSKKKSNLMMSLF 353
+Q +W +L SQ + ++N + SL+
Sbjct: 63 IQQDADWDSVLSSQQRMESENNKLCSLY 90
>gi|109715827 zinc finger protein 35 [Homo sapiens]
Length = 527
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 366 MAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQT 414
+A GP+ KE E++N FP Q +++ +++N+ VW GLQT
Sbjct: 11 LAPWGPVKVKKEEE--EEEN---FPGQASSQQVHSENIKVWAPVQGLQT 54
>gi|62243769 signal transducing adaptor family member 2 isoform 2
[Homo sapiens]
Length = 403
Score = 31.2 bits (69), Expect = 2.4
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 337 YSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNK 396
Y +AD + N+ ++ PGP P P G L P S D P P P +
Sbjct: 256 YVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPAS--------SQDKLPPLPPLPNQE 307
Query: 397 RSY 399
+Y
Sbjct: 308 ENY 310
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 31.2 bits (69), Expect = 2.4
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 337 YSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNK 396
Y +AD + N+ ++ PGP P P G L P S D P P P +
Sbjct: 256 YVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPAS--------SQDKLPPLPPLPNQE 307
Query: 397 RSY 399
+Y
Sbjct: 308 ENY 310
>gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Homo
sapiens]
Length = 823
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 299 ANQIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLF-EPGP 357
A +GK FC+L G+ +++ L PEW+ +++ L +++F E G
Sbjct: 523 AADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWN-KVFTFPIKDIHDVLEVTVFDEDGD 581
Query: 358 EPLPWLGKMA-QLGPISDAKENPY 380
+P +LGK+A L I D + N Y
Sbjct: 582 KPPDFLGKVAIPLLSIRDGQPNCY 605
>gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Homo
sapiens]
Length = 878
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 299 ANQIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLF-EPGP 357
A +GK FC+L G+ +++ L PEW+ +++ L +++F E G
Sbjct: 523 AADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWN-KVFTFPIKDIHDVLEVTVFDEDGD 581
Query: 358 EPLPWLGKMA-QLGPISDAKENPY 380
+P +LGK+A L I D + N Y
Sbjct: 582 KPPDFLGKVAIPLLSIRDGQPNCY 605
>gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Homo
sapiens]
Length = 306
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 299 ANQIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLF-EPGP 357
A +GK FC+L G+ +++ L PEW+ +++ L +++F E G
Sbjct: 111 AADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWN-KVFTFPIKDIHDVLEVTVFDEDGD 169
Query: 358 EPLPWLGKMA-QLGPISDAKENPY 380
+P +LGK+A L I D + N Y
Sbjct: 170 KPPDFLGKVAIPLLSIRDGQPNCY 193
>gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens]
Length = 534
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 333 HGMLYSQADSKKKSNLMMSLFEPGPEPL-------PWLGKMA--QLGPISDAKENPYGED 383
+G A S KSNL++S PG +PL P++G+M+ + PI + P GED
Sbjct: 250 NGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMNGVTGPDGED 309
Query: 384 ----------DNKSPFPLQPKNKRSYAQNVTVWIKPS 410
KS P Q ++K S + + T+ ++ S
Sbjct: 310 YSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKS 346
>gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens]
Length = 520
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 333 HGMLYSQADSKKKSNLMMSLFEPGPEPL-------PWLGKMA--QLGPISDAKENPYGED 383
+G A S KSNL++S PG +PL P++G+M+ + PI + P GED
Sbjct: 250 NGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMNGVTGPDGED 309
Query: 384 ----------DNKSPFPLQPKNKRSYAQNVTVWIKPS 410
KS P Q ++K S + + T+ ++ S
Sbjct: 310 YSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKS 346
>gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens]
Length = 521
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 333 HGMLYSQADSKKKSNLMMSLFEPGPEPL-------PWLGKMA--QLGPISDAKENPYGED 383
+G A S KSNL++S PG +PL P++G+M+ + PI + P GED
Sbjct: 250 NGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMNGVTGPDGED 309
Query: 384 ----------DNKSPFPLQPKNKRSYAQNVTVWIKPS 410
KS P Q ++K S + + T+ ++ S
Sbjct: 310 YSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKS 346
>gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens]
Length = 552
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 333 HGMLYSQADSKKKSNLMMSLFEPGPEPL-------PWLGKMA--QLGPISDAKENPYGED 383
+G A S KSNL++S PG +PL P++G+M+ + PI + P GED
Sbjct: 250 NGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMNGVTGPDGED 309
Query: 384 ----------DNKSPFPLQPKNKRSYAQNVTVWIKPS 410
KS P Q ++K S + + T+ ++ S
Sbjct: 310 YSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKS 346
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 29.6 bits (65), Expect = 6.9
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 361 PW-LGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVW-IKPSGLQTDVQK 418
PW + + P+ NP+ D+++SPF L+ K S+ Q +W I+P D K
Sbjct: 1867 PWGVPVQGDIEPVETHYTNPFS-DNHQSPF-LEGNGKNSHEQ---LWNIQPRQPDPDADK 1921
Query: 419 ILRNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQ 478
+ KL + KE + + ++ +L + + T+LP HPD AF
Sbjct: 1922 FSQLV-KLDQ-----IKEKDSREQTFVSAAGDELTPETPTQEQCQDTMLPVCDHPDTAF- 1974
Query: 479 LTHAAQ 484
THA +
Sbjct: 1975 -THAEE 1979
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 29.6 bits (65), Expect = 6.9
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 372 ISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQ 431
+SD ++ DD K PL P S + +T+ ++ + T
Sbjct: 1970 VSDEQDEGVESDDLKKDLPLMPPPPDSCSMKLTI--------KEIWFSFAAPTNVRSHTH 2021
Query: 432 TFYKELNRLRKAALAFGF----LDLLKGVADMLERECTL 466
F ++LN L A A G +D LK + LE E TL
Sbjct: 2022 AFSRQLNLLSTATPAVGAWLVPIDQLKSSLNKLETEGTL 2060
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 29.3 bits (64), Expect = 9.1
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 65 PFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAI-----PCQVVLVTDGCL 119
P +R L + D ++ + + S+ + N V W A+ PC L+ +
Sbjct: 115 PVSRSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNSSLIALPSI 174
Query: 120 GIGRGSLRHSLATQNQRSESNRFPLPFPF 148
+ + SLA+ N+ + N +PL PF
Sbjct: 175 SLLLQEFKASLASSNEANSINAYPLDLPF 203
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 29.3 bits (64), Expect = 9.1
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 65 PFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAI-----PCQVVLVTDGCL 119
P +R L + D ++ + + S+ + N V W A+ PC L+ +
Sbjct: 115 PVSRSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNSSLIALPSI 174
Query: 120 GIGRGSLRHSLATQNQRSESNRFPLPFPF 148
+ + SLA+ N+ + N +PL PF
Sbjct: 175 SLLLQEFKASLASSNEANSINAYPLDLPF 203
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 29.3 bits (64), Expect = 9.1
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 65 PFTRDYNTLQEALSNMDDYDKTCLGSALVGVCNIVQQEWGGAI-----PCQVVLVTDGCL 119
P +R L + D ++ + + S+ + N V W A+ PC L+ +
Sbjct: 115 PVSRSVTILARTEPSNDSFNVSSVVSSDRPLTNRVLDGWLLALGDPLGPCNSSLIALPSI 174
Query: 120 GIGRGSLRHSLATQNQRSESNRFPLPFPF 148
+ + SLA+ N+ + N +PL PF
Sbjct: 175 SLLLQEFKASLASSNEANSINAYPLDLPF 203
>gi|221219000 phospholipase C-like 2 isoform 1 [Homo sapiens]
Length = 1127
Score = 29.3 bits (64), Expect = 9.1
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 394 KNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNRLRKAALAFGFLDLL 453
K R YA T+WIK V ++ +NA+ P + T +E ++ A ++F L L
Sbjct: 900 KKSREYASLRTLWIK------TVDEVFKNAQP-PIRDATDLRE--NMQNAVVSFKELCGL 950
Query: 454 KGVADMLERECTLLPETAHPD 474
VA++++ + P PD
Sbjct: 951 SSVANLMQCMLAVSPRFLGPD 971
>gi|163644311 phospholipase C-like 2 isoform 2 [Homo sapiens]
Length = 1001
Score = 29.3 bits (64), Expect = 9.1
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 394 KNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNRLRKAALAFGFLDLL 453
K R YA T+WIK V ++ +NA+ P + T +E ++ A ++F L L
Sbjct: 774 KKSREYASLRTLWIK------TVDEVFKNAQP-PIRDATDLRE--NMQNAVVSFKELCGL 824
Query: 454 KGVADMLERECTLLPETAHPD 474
VA++++ + P PD
Sbjct: 825 SSVANLMQCMLAVSPRFLGPD 845
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 29.3 bits (64), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 327 QLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEP 359
Q P+ GM Y+ DS KS SLF+ P P
Sbjct: 445 QTAPKMLGMFYTSNDSPSKSVFTSSLFQMEPSP 477
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,400,121
Number of Sequences: 37866
Number of extensions: 965547
Number of successful extensions: 2060
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2055
Number of HSP's gapped (non-prelim): 31
length of query: 518
length of database: 18,247,518
effective HSP length: 107
effective length of query: 411
effective length of database: 14,195,856
effective search space: 5834496816
effective search space used: 5834496816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.