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Search of human proteins with 6005731
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005731 calcium binding protein P22 [Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005731 calcium binding protein P22 [Homo sapiens] 385 e-107
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi... 242 2e-64
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 131 4e-31
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 122 2e-28
gi|95007022 tescalcin [Homo sapiens] 115 2e-26
gi|5453708 DNA-dependent protein kinase catalytic subunit-intera... 72 2e-13
gi|163644313 calcium and integrin binding 1 [Homo sapiens] 62 2e-10
gi|71274156 calcium and integrin binding family member 4 [Homo s... 60 1e-09
gi|16930817 DNA-dependent protein kinase catalytic subunit-inter... 58 4e-09
gi|7705419 hippocalcin-like protein 4 [Homo sapiens] 57 1e-08
gi|58218968 calmodulin 3 [Homo sapiens] 55 4e-08
gi|4502549 calmodulin 2 [Homo sapiens] 55 4e-08
gi|5901912 calmodulin 1 [Homo sapiens] 55 4e-08
gi|21361559 visinin-like 1 [Homo sapiens] 53 2e-07
gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo sap... 53 2e-07
gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo sap... 53 2e-07
gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo sap... 53 2e-07
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap... 53 2e-07
gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo sap... 53 2e-07
gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo sap... 53 2e-07
gi|4885111 calmodulin-like 3 [Homo sapiens] 52 2e-07
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 52 3e-07
gi|19913443 hippocalcin-like 1 [Homo sapiens] 51 7e-07
gi|19913441 hippocalcin-like 1 [Homo sapiens] 51 7e-07
gi|98985795 neurocalcin delta [Homo sapiens] 50 9e-07
gi|98985793 neurocalcin delta [Homo sapiens] 50 9e-07
gi|98985791 neurocalcin delta [Homo sapiens] 50 9e-07
gi|98985789 neurocalcin delta [Homo sapiens] 50 9e-07
gi|98985787 neurocalcin delta [Homo sapiens] 50 9e-07
gi|98985785 neurocalcin delta [Homo sapiens] 50 9e-07
>gi|6005731 calcium binding protein P22 [Homo sapiens]
Length = 195
Score = 385 bits (988), Expect = e-107
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 60
MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 60
Query: 61 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 120
PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR
Sbjct: 61 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 120
Query: 121 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL
Sbjct: 121 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Query: 181 EKVDVEQKMSIRFLH 195
EKVDVEQKMSIRFLH
Sbjct: 181 EKVDVEQKMSIRFLH 195
>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
sapiens]
Length = 196
Score = 242 bits (617), Expect = 2e-64
Identities = 119/195 (61%), Positives = 155/195 (79%), Gaps = 1/195 (0%)
Query: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 60
MGSR+S + + I++ETGFS + + RL+ RF +LD+ + G LSR D Q+I LA+N
Sbjct: 1 MGSRSSHAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN 60
Query: 61 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNE-KSKDVNGPEPLNSRSNKLHFAF 119
PLGDRII +FFP+G +V+F GF+R LAHFRP+ED + +++D PEPLNSR NKLH+AF
Sbjct: 61 PLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAF 120
Query: 120 RLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
+LYDLD+D KISR E+LQVLR+MVGV +++EQL +IADRT+QEAD+DGD A+SF EF K
Sbjct: 121 QLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKS 180
Query: 180 LEKVDVEQKMSIRFL 194
LEK+DVEQKMSIR L
Sbjct: 181 LEKMDVEQKMSIRIL 195
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 131 bits (329), Expect = 4e-31
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 15/169 (8%)
Query: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRG 82
F +I RL RF LD +G+LS E+F +PEL NPL R+I+ F +G +V+F+
Sbjct: 15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKE 74
Query: 83 FMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMM 142
F+ ++ F D E+ KL FAFR+YD+DKD IS EL QVL+MM
Sbjct: 75 FIEGVSQFSVKGDKEQ---------------KLRFAFRIYDMDKDGYISNGELFQVLKMM 119
Query: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMSI 191
VG N+ D QL I D+TI AD+DGD ISF EF V+ +D+ +KM +
Sbjct: 120 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 168
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 122 bits (306), Expect = 2e-28
Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRG 82
F + +I RL RF LD ++G+LS E+F +PEL NPL R+I+ F +G+ +V+F+
Sbjct: 18 FDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGDGEVDFKE 77
Query: 83 FMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMM 142
F+ + F D E+ KL FAF +YD+DKD IS EL QVL+MM
Sbjct: 78 FILGTSQFSVKGDEEQ---------------KLRFAFSIYDMDKDGYISNGELFQVLKMM 122
Query: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189
VG N++D QL + D+TI D+DGD ISF EF V+ +++ +K+
Sbjct: 123 VGNNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVVRDLEIHKKL 169
>gi|95007022 tescalcin [Homo sapiens]
Length = 267
Score = 115 bits (288), Expect = 2e-26
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 26/214 (12%)
Query: 2 GSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP 61
G+ + EE+ E++ +TGFS QI +L+ RF L G+ T+ +E+F +P+L +NP
Sbjct: 52 GTMGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLS-GDQPTIRKENFNNVPDLELNP 110
Query: 62 LGDRIINAFF--------PEG-EDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRS 112
+ +I+ AFF P G D++NF F+ +++FRPI+ + V SR
Sbjct: 111 IRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVE-----LSRK 165
Query: 113 NKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVN--ISDEQLGSIADRTIQEA------D 164
KL F F +YD D D +I+ +E V+ ++ N I E SIAD + EA
Sbjct: 166 EKLRFLFHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQ 225
Query: 165 QDGD---SAISFTEFVKVLEKVDVEQKMSIRFLH 195
+ D I+F +F+K+ + +D+E KM +RFL+
Sbjct: 226 MEPDQVYEGITFEDFLKIWQGIDIETKMHVRFLN 259
>gi|5453708 DNA-dependent protein kinase catalytic
subunit-interacting protein 2 [Homo sapiens]
Length = 187
Score = 72.4 bits (176), Expect = 2e-13
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 33/195 (16%)
Query: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQR------- 53
MG++ T+ +E+L+ + T F+ I +L+SRF L L D+++
Sbjct: 1 MGNK-QTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPN----LVPMDYRKSPIVHVP 55
Query: 54 ------IPELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEP 107
+PEL NP +RI+ AF +GE + F F+ D + P
Sbjct: 56 MSLIIQMPELRENPFKERIVAAFSEDGEGNLTFNDFV----------DMFSVLCESAPRE 105
Query: 108 LNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDG 167
L K ++AF++YD + D I +++L L + + +E++ + D+ I+EAD DG
Sbjct: 106 L-----KANYAFKIYDFNTDNFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDG 160
Query: 168 DSAISFTEFVKVLEK 182
D + F +F ++ K
Sbjct: 161 DGKLGFADFEDMIAK 175
>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
Length = 191
Score = 62.4 bits (150), Expect = 2e-10
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSR--------EDFQ 52
MG S L + E L E + T + +I + RF L E ++ E
Sbjct: 1 MGGSGSRLSK-ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQIL 59
Query: 53 RIPELAINPLGDRIINAFFPE-GEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSR 111
+PEL NP +RI F +D ++F F+ L+ F D P+
Sbjct: 60 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF---------SDTATPDI---- 106
Query: 112 SNKLHFAFRLYDLDKDEKISRDELLQVLRMMVG----VNISDEQLGSIADRTIQEADQDG 167
K H+AFR++D D D ++R++L +++ + G +S ++ + D ++E+D D
Sbjct: 107 --KSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDR 164
Query: 168 DSAISFTEFVKVLEK 182
D I+ +EF V+ +
Sbjct: 165 DGTINLSEFQHVISR 179
>gi|71274156 calcium and integrin binding family member 4 [Homo
sapiens]
Length = 185
Score = 60.1 bits (144), Expect = 1e-09
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 22/176 (12%)
Query: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKG----ENGTLSREDFQRIPELAINPLGDRII 67
E+LEE + T + ++I ++ F L + TL+ + +P L +NP DRI
Sbjct: 12 EDLEEYQALTFLTRNEILCIHDTFLKLCPPGKYYKEATLTMDQVSSLPALRVNPFRDRIC 71
Query: 68 NAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKD 127
F +G +F + + F +E++ S K+ +AFR+YD +++
Sbjct: 72 RVFSHKG--MFSFEDVLGMASVF-----SEQA----------CPSLKIEYAFRIYDFNEN 114
Query: 128 EKISRDELLQV-LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182
I ++L ++ LR++ ++S++ L + + + E+D D D+ +SF+EF + K
Sbjct: 115 GFIDEEDLQRIILRLLNSDDMSEDLLMDLTNHVLSESDLDNDNMLSFSEFEHAMAK 170
>gi|16930817 DNA-dependent protein kinase catalytic
subunit-interacting protein 3 [Homo sapiens]
Length = 187
Score = 58.2 bits (139), Expect = 4e-09
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKG---------ENGTLSREDF 51
MG++ T+ E+LE + T F+ +I RL+ R+ L + + E
Sbjct: 1 MGNK-QTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELI 59
Query: 52 QRIPELAINPLGDRIINAFFPEGEDQV---NFRGFMRTLAHFRPIEDNEKSKDVNGPEPL 108
+PEL NP RI F +G+ + NF ++ P
Sbjct: 60 GSMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAP---------------- 103
Query: 109 NSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD 168
R K ++AF++YD + D+ I +L Q + + +S E++ + ++ + EAD D D
Sbjct: 104 --RDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHD 161
Query: 169 SAISFTEFVKVL 180
+S +F ++
Sbjct: 162 GRLSLEDFQNMI 173
>gi|7705419 hippocalcin-like protein 4 [Homo sapiens]
Length = 191
Score = 56.6 bits (135), Expect = 1e-08
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
+ ++ L E LE++ + T FS ++ + Y F L +G L+ E+FQ++ + P G
Sbjct: 3 KTNSKLAPEVLEDLVQNTEFSEQELKQWYKGF--LKDCPSGILNLEEFQQL-YIKFFPYG 59
Query: 64 D------RIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHF 117
D F G+ ++FR F+ L+ S KL++
Sbjct: 60 DASKFAQHAFRTFDKNGDGTIDFREFICALS----------------VTSRGSFEQKLNW 103
Query: 118 AFRLYDLDKDEKISRDELLQVLR---------MMVGVNISDEQLGSIADRTIQEADQDGD 168
AF +YDLD D +I+R E+L+++ +M+ +N D+ ++ DQD D
Sbjct: 104 AFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKD 163
Query: 169 SAISFTEF 176
I+ EF
Sbjct: 164 DQITLEEF 171
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPE-LAINPLGDRI---INAFFPEGEDQVN 79
+ QI F+ DK +GT++ ++ + L NP + IN +G ++
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 80 FRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVL 139
F F+ +A K KD + E + AFR++D D + IS EL V+
Sbjct: 66 FPEFLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGYISAAELRHVM 110
Query: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
+ G ++DE++ D I+EAD DGD +++ EFV+++
Sbjct: 111 TNL-GEKLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
AF L+D D D I+ EL V+R + G N ++ +L + I E D DG+ I F EF+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFL 70
Query: 178 KVLEK--VDVEQKMSIR 192
++ + D + + IR
Sbjct: 71 TMMARKMKDTDSEEEIR 87
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPE-LAINPLGDRI---INAFFPEGEDQVN 79
+ QI F+ DK +GT++ ++ + L NP + IN +G ++
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 80 FRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVL 139
F F+ +A K KD + E + AFR++D D + IS EL V+
Sbjct: 66 FPEFLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGYISAAELRHVM 110
Query: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
+ G ++DE++ D I+EAD DGD +++ EFV+++
Sbjct: 111 TNL-GEKLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
AF L+D D D I+ EL V+R + G N ++ +L + I E D DG+ I F EF+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFL 70
Query: 178 KVLEK--VDVEQKMSIR 192
++ + D + + IR
Sbjct: 71 TMMARKMKDTDSEEEIR 87
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPE-LAINPLGDRI---INAFFPEGEDQVN 79
+ QI F+ DK +GT++ ++ + L NP + IN +G ++
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 80 FRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVL 139
F F+ +A K KD + E + AFR++D D + IS EL V+
Sbjct: 66 FPEFLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGYISAAELRHVM 110
Query: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
+ G ++DE++ D I+EAD DGD +++ EFV+++
Sbjct: 111 TNL-GEKLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
AF L+D D D I+ EL V+R + G N ++ +L + I E D DG+ I F EF+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFL 70
Query: 178 KVLEK--VDVEQKMSIR 192
++ + D + + IR
Sbjct: 71 TMMARKMKDTDSEEEIR 87
>gi|21361559 visinin-like 1 [Homo sapiens]
Length = 191
Score = 52.8 bits (125), Expect = 2e-07
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 40/191 (20%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
+ ++ L E +E++ K T F+ ++ + Y F L +G L+ E+FQ++ + P G
Sbjct: 3 KQNSKLAPEVMEDLVKSTEFNEHELKQWYKGF--LKDCPSGRLNLEEFQQL-YVKFFPYG 59
Query: 64 D------RIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---K 114
D F G+ ++FR F+ L+ + SR + K
Sbjct: 60 DASKFAQHAFRTFDKNGDGTIDFREFICALS-------------------ITSRGSFEQK 100
Query: 115 LHFAFRLYDLDKDEKISRDELLQVLR---------MMVGVNISDEQLGSIADRTIQEADQ 165
L++AF +YDLD D KI+R E+L+++ +M+ +N D+ + D+
Sbjct: 101 LNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDK 160
Query: 166 DGDSAISFTEF 176
+ D I+ EF
Sbjct: 161 NKDDQITLDEF 171
>gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo
sapiens]
Length = 225
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR---- 65
R E LE+++++T F+ ++ LY F + + +G ++ E+F++I P GD
Sbjct: 44 RPEGLEQLQEQTKFTRKELQVLYRGFKN--ECPSGIVNEENFKQIYSQFF-PQGDSSTYA 100
Query: 66 --IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
+ NAF + V+F F+ L S + G + ++L++AF LYD
Sbjct: 101 TFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWAFNLYD 144
Query: 124 LDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
L+KD I+++E+L +++ + + + +E + Q+ D++ D ++ EF
Sbjct: 145 LNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 204
Query: 177 VKVLEK 182
++ +K
Sbjct: 205 IESCQK 210
>gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo
sapiens]
Length = 220
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR---- 65
R E LE+++++T F+ ++ LY F + + +G ++ E+F++I P GD
Sbjct: 39 RPEGLEQLQEQTKFTRKELQVLYRGFKN--ECPSGIVNEENFKQIYSQFF-PQGDSSTYA 95
Query: 66 --IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
+ NAF + V+F F+ L S + G + ++L++AF LYD
Sbjct: 96 TFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWAFNLYD 139
Query: 124 LDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
L+KD I+++E+L +++ + + + +E + Q+ D++ D ++ EF
Sbjct: 140 LNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 199
Query: 177 VKVLEK 182
++ +K
Sbjct: 200 IESCQK 205
>gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo
sapiens]
Length = 252
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR---- 65
R E LE+++++T F+ ++ LY F + + +G ++ E+F++I P GD
Sbjct: 71 RPEGLEQLQEQTKFTRKELQVLYRGFKN--ECPSGIVNEENFKQIYSQFF-PQGDSSTYA 127
Query: 66 --IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
+ NAF + V+F F+ L S + G + ++L++AF LYD
Sbjct: 128 TFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWAFNLYD 171
Query: 124 LDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
L+KD I+++E+L +++ + + + +E + Q+ D++ D ++ EF
Sbjct: 172 LNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 231
Query: 177 VKVLEK 182
++ +K
Sbjct: 232 IESCQK 237
>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
sapiens]
Length = 227
Score = 52.8 bits (125), Expect = 2e-07
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFT-----SLDKGENGTLSREDFQRIPELAINPLGD 64
R E LE+++++T F+ ++ LY F S + +G ++ E+F++I P GD
Sbjct: 39 RPEGLEQLQEQTKFTRKELQVLYRGFKNPGALSFQECPSGIVNEENFKQIYSQFF-PQGD 97
Query: 65 R------IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFA 118
+ NAF + V+F F+ L S + G + ++L++A
Sbjct: 98 SSTYATFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWA 141
Query: 119 FRLYDLDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAI 171
F LYDL+KD I+++E+L +++ + + + +E + Q+ D++ D +
Sbjct: 142 FNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVV 201
Query: 172 SFTEFVKVLEK 182
+ EF++ +K
Sbjct: 202 TIEEFIESCQK 212
>gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo
sapiens]
Length = 285
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR---- 65
R E LE+++++T F+ ++ LY F + + +G ++ E+F++I P GD
Sbjct: 104 RPEGLEQLQEQTKFTRKELQVLYRGFKN--ECPSGIVNEENFKQIYSQFF-PQGDSSTYA 160
Query: 66 --IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
+ NAF + V+F F+ L S + G + ++L++AF LYD
Sbjct: 161 TFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWAFNLYD 204
Query: 124 LDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
L+KD I+++E+L +++ + + + +E + Q+ D++ D ++ EF
Sbjct: 205 LNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 264
Query: 177 VKVLEK 182
++ +K
Sbjct: 265 IESCQK 270
>gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo
sapiens]
Length = 270
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 10 RDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR---- 65
R E LE+++++T F+ ++ LY F + + +G ++ E+F++I P GD
Sbjct: 89 RPEGLEQLQEQTKFTRKELQVLYRGFKN--ECPSGIVNEENFKQIYSQFF-PQGDSSTYA 145
Query: 66 --IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
+ NAF + V+F F+ L S + G + ++L++AF LYD
Sbjct: 146 TFLFNAFDTNHDGSVSFEDFVAGL-----------SVILRG-----TVDDRLNWAFNLYD 189
Query: 124 LDKDEKISRDELLQVLRMMVGV-------NISDEQLGSIADRTIQEADQDGDSAISFTEF 176
L+KD I+++E+L +++ + + + +E + Q+ D++ D ++ EF
Sbjct: 190 LNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 249
Query: 177 VKVLEK 182
++ +K
Sbjct: 250 IESCQK 255
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 52.4 bits (124), Expect = 2e-07
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 24/161 (14%)
Query: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPE-LAINPLGDRI---INAFFPEGEDQVN 79
+ Q+T F+ DK +G ++ + + L NP + ++ +G V+
Sbjct: 6 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 65
Query: 80 FRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVL 139
F F+ +A K KD + E + AFR++D D + +S EL V+
Sbjct: 66 FPEFLGMMAR--------KMKDTDNEEEIRE-------AFRVFDKDGNGFVSAAELRHVM 110
Query: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
+ G +SDE++ D I+ AD DGD +++ EFV+VL
Sbjct: 111 TRL-GEKLSDEEV----DEMIRAADTDGDGQVNYEEFVRVL 146
Score = 34.7 bits (78), Expect = 0.053
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
AF L+D D D I+ EL V+R + G N ++ +L + + E D+DG+ + F EF+
Sbjct: 16 AFSLFDKDGDGCITTRELGTVMRSL-GQNPTEAELRDM----MSEIDRDGNGTVDFPEFL 70
Query: 178 KVLEK--VDVEQKMSIR 192
++ + D + + IR
Sbjct: 71 GMMARKMKDTDNEEEIR 87
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 52.0 bits (123), Expect = 3e-07
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 38/189 (20%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
++++ L+ E +EE+ ++T F+ ++ + Y F + +G L FQ+I + P G
Sbjct: 3 KSNSKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFF-PFG 59
Query: 64 DR------IINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---K 114
D + N F + ++ F F++ L+ + SR K
Sbjct: 60 DPTKFATFVFNVFDENKDGRIEFSEFIQALS-------------------VTSRGTLDEK 100
Query: 115 LHFAFRLYDLDKDEKISRDELLQV---LRMMVG--VNISDEQ--LGSIADRTIQEADQDG 167
L +AF+LYDLD D I+R+E+L + + MVG V + +E+ DR D++
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNA 160
Query: 168 DSAISFTEF 176
D ++ EF
Sbjct: 161 DGKLTLQEF 169
>gi|19913443 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 50.8 bits (120), Expect = 7e-07
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E L+++++ T F+ ++ Y F L G L+ ++F++I P
Sbjct: 3 KQNSKLRPEVLQDLRENTEFTDHELQEWYKGF--LKDCPTGHLTVDEFKKIYANFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDTNGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + ISR E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNND 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|19913441 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 50.8 bits (120), Expect = 7e-07
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E L+++++ T F+ ++ Y F L G L+ ++F++I P
Sbjct: 3 KQNSKLRPEVLQDLRENTEFTDHELQEWYKGF--LKDCPTGHLTVDEFKKIYANFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDTNGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + ISR E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNND 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985795 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985793 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985791 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985789 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985787 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
>gi|98985785 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.4 bits (119), Expect = 9e-07
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELA 58
+ ++ LR E ++++ + T F+ +I Y F L +G LS E+F++I P
Sbjct: 3 KQNSKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGD 60
Query: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSN---KL 115
+ + + F G+ ++FR F+ L+ + SR KL
Sbjct: 61 ASKFAEHVFRTFDANGDGTIDFREFIIALS-------------------VTSRGKLEQKL 101
Query: 116 HFAFRLYDLDKDEKISRDELLQVL----RMMVGVNISDEQLGSIADRT---IQEADQDGD 168
+AF +YDLD + IS+ E+L+++ +M+ V E + RT ++ D + D
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 169 SAISFTEFVK 178
+S EF++
Sbjct: 162 GKLSLEEFIR 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,791,100
Number of Sequences: 37866
Number of extensions: 299463
Number of successful extensions: 1095
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 892
Number of HSP's gapped (non-prelim): 191
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.