Guide to the Human Genome
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Name: KCNIP2 Sequence: fasta or formatted (252aa) NCBI GI: 27886672
Description:

Kv channel interacting protein 2 isoform 3

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [285aa] Kv channel interacting protein 2 isoform 1
alt prot [270aa] Kv channel interacting protein 2 isoform 2
alt prot [227aa] Kv channel interacting protein 2 isoform 4
alt prot [225aa] Kv channel interacting protein 2 isoform 5
alt prot [220aa] Kv channel interacting protein 2 isoform 6
alt prot [184aa] Kv channel interacting protein 2 isoform 7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          8           1
 C cysteine            2.4          6           2
 D aspartate           7.9         20           2
 E glutamate           8.7         22           2
 F phenylalanine       6.7         17           2
 G glycine             6.3         16           1
 H histidine           1.6          4           1
 I isoleucine          4.0         10           1
 K lysine              6.3         16           2
 L leucine             8.7         22           2
 M methionine          3.2          8           2
 N asparagine          4.8         12           1
 P proline             4.4         11           2
 Q glutamine           5.6         14           1
 R arginine            5.2         13           1
 S serine              7.5         19           2
 T threonine           4.8         12           1
 V valine              5.2         13           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kv channel interacting protein 2 isoform 3 
KCNIP2                0.972   Kv channel interacting protein 2 isoform 2 
KCNIP2                0.961   Kv channel interacting protein 2 isoform 1 
KCNIP2                0.824   Kv channel interacting protein 2 isoform 6 
KCNIP2                0.809   Kv channel interacting protein 2 isoform 4 
KCNIP2                0.769   Kv channel interacting protein 2 isoform 5 
KCNIP4                0.680   Kv channel interacting protein 4 isoform 1 
KCNIP4                0.641   Kv channel interacting protein 4 isoform 4 
KCNIP4                0.639   Kv channel interacting protein 4 isoform 5 
KCNIP4                0.635   Kv channel interacting protein 4 isoform 2 
KCNIP4                0.613   Kv channel interacting protein 4 isoform 3 
KCNIP4                0.613   Kv channel interacting protein 4 isoform 3 
KCNIP1                0.594   Kv channel interacting protein 1 isoform 3 
KCNIP3                0.594   Kv channel interacting protein 3 isoform 1 
KCNIP1                0.592   Kv channel interacting protein 1 isoform 2 
KCNIP3                0.592   Kv channel interacting protein 3 isoform 2 
KCNIP1                0.588   Kv channel interacting protein 1 isoform 1 
KCNIP2                0.578   Kv channel interacting protein 2 isoform 7 
FREQ                  0.320   frequenin homolog isoform 1 
HPCA                  0.300   hippocalcin 
FREQ                  0.296   frequenin homolog isoform 2 
HPCAL4                0.292   hippocalcin-like protein 4 
VSNL1                 0.290   visinin-like 1 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
NCALD                 0.288   neurocalcin delta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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