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Search of human proteins with 5902052
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5902052 relaxin 1 preproprotein [Homo sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5902052 relaxin 1 preproprotein [Homo sapiens] 372 e-104
gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens] 308 1e-84
gi|20143935 relaxin 2 isoform 2 [Homo sapiens] 129 2e-30
gi|38569396 insulin-like 6 precursor [Homo sapiens] 55 3e-08
gi|4504711 insulin-like 4 precursor [Homo sapiens] 45 4e-05
gi|18254464 relaxin 3 preproprotein [Homo sapiens] 37 0.007
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 35 0.028
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 35 0.028
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 35 0.028
gi|38569233 insulin-like 5 precursor [Homo sapiens] 32 0.24
gi|38327535 insulin-like 3 precursor [Homo sapiens] 30 1.5
gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1 [... 30 1.5
gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2 [... 30 1.5
gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3 [... 30 1.5
gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 29 2.0
gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo ... 29 2.0
gi|239748103 PREDICTED: hypothetical protein [Homo sapiens] 29 2.0
gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo ... 29 2.0
gi|33468965 hypothetical protein LOC57456 [Homo sapiens] 29 2.0
gi|11024682 insulin-like growth factor 1 isoform 4 preproprotein... 29 2.6
gi|163659903 insulin-like growth factor 1 isoform 3 preproprotei... 29 2.6
gi|163659901 insulin-like growth factor 1 isoform 2 preproprotei... 29 2.6
gi|163659899 insulin-like growth factor 1 isoform 1 preproprotei... 29 2.6
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 28 3.4
gi|221316624 dystonin isoform 4 [Homo sapiens] 28 3.4
gi|221316622 dystonin isoform 3 [Homo sapiens] 28 3.4
gi|221316618 dystonin isoform 2 [Homo sapiens] 28 3.4
gi|34577047 dystonin isoform 1 [Homo sapiens] 28 3.4
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 28 3.4
gi|4758440 glia maturation factor, gamma [Homo sapiens] 28 3.4
>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
Length = 185
Score = 372 bits (956), Expect = e-104
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALK 120
DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALK
Sbjct: 61 DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALK 120
Query: 121 DSNLSFEEFKKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRS 180
DSNLSFEEFKKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRS
Sbjct: 121 DSNLSFEEFKKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRS 180
Query: 181 LAKYC 185
LAKYC
Sbjct: 181 LAKYC 185
>gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
Length = 185
Score = 308 bits (790), Expect = 1e-84
Identities = 152/185 (82%), Positives = 166/185 (89%)
Query: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLF FHLL CLLLNQFSRAVA W ++VIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALK 120
DAPQTPRPVAEIVPSFINKDTETI +M EF+ANLP ELK LSE QP+LP+LQQ+VP LK
Sbjct: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQLQQHVPVLK 120
Query: 121 DSNLSFEEFKKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRS 180
DS+L FEEFKKLIRNRQSEAADS+PSELKYLGLDTHS+KKR+ Y AL KCC +GCTKRS
Sbjct: 121 DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGLDTHSRKKRQLYSALANKCCHVGCTKRS 180
Query: 181 LAKYC 185
LA++C
Sbjct: 181 LARFC 185
>gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
Length = 117
Score = 129 bits (323), Expect = 2e-30
Identities = 62/70 (88%), Positives = 64/70 (91%)
Query: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLF FHLL CLLLNQFSRAVA W ++VIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVA 70
DAPQTPRPVA
Sbjct: 61 DAPQTPRPVA 70
>gi|38569396 insulin-like 6 precursor [Homo sapiens]
Length = 213
Score = 55.5 bits (132), Expect = 3e-08
Identities = 59/213 (27%), Positives = 81/213 (38%), Gaps = 49/213 (23%)
Query: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRL LL LLL +FSR ++ KLCGR LV+ +CG + WS+ +E
Sbjct: 1 MPRLLRLSLLWLGLLLVRFSRELSDI--SSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
Query: 61 ----------------------DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPEL 98
++PQT P + T + E N
Sbjct: 59 TPFSRLIAQASEKVEAYSPYQFESPQTASPAR-------GRGTNPVSTSWEEAVN----- 106
Query: 99 KAALSERQPSLPELQQ---YVPALKDSNLSFEEFKKLIRNRQSEAADSNPSELKYLG--- 152
S SLPE + Y P K S + + ++ +++K L
Sbjct: 107 ----SWEMQSLPEYKDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLF 162
Query: 153 LDTHSQKKRRPYVALFEKCCLIGCTKRSLAKYC 185
H Q+KRR Y EKCCL GCTK L+ C
Sbjct: 163 WGHHPQRKRRGYS---EKCCLTGCTKEELSIAC 192
>gi|4504711 insulin-like 4 precursor [Homo sapiens]
Length = 139
Score = 45.1 bits (105), Expect = 4e-05
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 1 MPRLFLFHLLEFCLLLNQFSR-AVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQ 59
M LF +L LLL+Q R ++AA+ ++ CG + ++ C M + +
Sbjct: 1 MASLFRSYLPAIWLLLSQLLRESLAAE-----LRGCGPRFGKHLLSYCPMPEKTFTTTPG 55
Query: 60 EDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPEL 112
++ RP E+V + NKD + + EFI NL PELK LSE QPSL ++
Sbjct: 56 GWLLESGRP-KEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKI 107
>gi|18254464 relaxin 3 preproprotein [Homo sapiens]
Length = 142
Score = 37.4 bits (85), Expect = 0.007
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
M R L LL +L + A+ ++LCGRE +RA I CG S W + +
Sbjct: 1 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH 60
Query: 61 DAPQTPRPVAE 71
+A P A+
Sbjct: 61 EAMGDTFPDAD 71
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 35.4 bits (80), Expect = 0.028
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQP 107
G S SKR + P TP P +P ++ +T L+F L P+L+ P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLET----FPLDFTEPLNPDLRETPHPESP 102
Query: 108 SLPELQQYVPALKDS-NLSFEEFKKLIRNRQSEAADSNPSELKYLG 152
P+ ++ +S ++ K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 35.4 bits (80), Expect = 0.028
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQP 107
G S SKR + P TP P +P ++ +T L+F L P+L+ P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLET----FPLDFTEPLNPDLRETPHPESP 102
Query: 108 SLPELQQYVPALKDS-NLSFEEFKKLIRNRQSEAADSNPSELKYLG 152
P+ ++ +S ++ K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 35.4 bits (80), Expect = 0.028
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 48 GMSTWSKRSLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQP 107
G S SKR + P TP P +P ++ +T L+F L P+L+ P
Sbjct: 47 GASENSKRDRLNPEFPGTPYPEPSKLPHTVSLET----FPLDFTEPLNPDLRETPHPESP 102
Query: 108 SLPELQQYVPALKDS-NLSFEEFKKLIRNRQSEAADSNPSELKYLG 152
P+ ++ +S ++ K+ SE P+E+ + G
Sbjct: 103 ETPKADSLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEMPHPG 148
>gi|38569233 insulin-like 5 precursor [Homo sapiens]
Length = 135
Score = 32.3 bits (72), Expect = 0.24
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 12 FCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQ 64
F L L A++ + ++LCG E +R I IC S W + QE PQ
Sbjct: 6 FTLFLFSVLFAISEVRSKESVRLCGLEYIRTVIYICASSRWRRH---QEGIPQ 55
>gi|38327535 insulin-like 3 precursor [Homo sapiens]
Length = 131
Score = 29.6 bits (65), Expect = 1.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 33 KLCGRELVRAQIAICGMSTWS 53
KLCG VRA + +CG WS
Sbjct: 32 KLCGHHFVRALVRVCGGPRWS 52
>gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1
[Homo sapiens]
Length = 871
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQY 115
+L +E+ + +P + P F K + E + L +LKA E S+ +L+
Sbjct: 395 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 454
Query: 116 VPALKDSNLSFEEFKKLI-RNRQSEAADSNPSELKYLGLD---THSQKKRR 162
V +L++ S + + ++ R+ Q +AA+ + GL + +Q+ RR
Sbjct: 455 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARR 505
>gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2
[Homo sapiens]
Length = 835
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQY 115
+L +E+ + +P + P F K + E + L +LKA E S+ +L+
Sbjct: 359 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 418
Query: 116 VPALKDSNLSFEEFKKLI-RNRQSEAADSNPSELKYLGLD---THSQKKRR 162
V +L++ S + + ++ R+ Q +AA+ + GL + +Q+ RR
Sbjct: 419 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARR 469
>gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3
[Homo sapiens]
Length = 782
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 56 SLSQEDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQY 115
+L +E+ + +P + P F K + E + L +LKA E S+ +L+
Sbjct: 306 ALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQ 365
Query: 116 VPALKDSNLSFEEFKKLI-RNRQSEAADSNPSELKYLGLD---THSQKKRR 162
V +L++ S + + ++ R+ Q +AA+ + GL + +Q+ RR
Sbjct: 366 VASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARR 416
>gi|4557669 interleukin 4 receptor alpha chain isoform a precursor
[Homo sapiens]
Length = 825
Score = 29.3 bits (64), Expect = 2.0
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 9 LLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQEDA--PQTP 66
+L CLL + +W D + LV I S W KRS QE A P
Sbjct: 244 ILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCPHWK 303
Query: 67 RPVAEIVPSFI 77
+ +++P F+
Sbjct: 304 NCLTKLLPCFL 314
>gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo
sapiens]
Length = 366
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 30 DVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRP 68
DVI+LCG +L R ++ CG +T Q D +T +P
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQP 101
>gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 366
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 30 DVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRP 68
DVI+LCG +L R ++ CG +T Q D +T +P
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQP 101
>gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
sapiens]
Length = 366
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 30 DVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRP 68
DVI+LCG +L R ++ CG +T Q D +T +P
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQP 101
>gi|33468965 hypothetical protein LOC57456 [Homo sapiens]
Length = 154
Score = 29.3 bits (64), Expect = 2.0
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 21/85 (24%)
Query: 95 PPELKAALSERQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEAADS----------- 143
PP+ S+++ P+ V LK +LS EE K+ ++ AD
Sbjct: 42 PPDEDGDHSDKEDEQPQ----VVVLKKGDLSVEEVMKIKAEIKAAKADEEPTPADGRIIY 97
Query: 144 -----NPSELKYLGLDTHSQKKRRP 163
+PS+ KY GL T S KK++P
Sbjct: 98 RKPVKHPSDEKYSGL-TASSKKKKP 121
>gi|11024682 insulin-like growth factor 1 isoform 4 preproprotein
[Homo sapiens]
Length = 153
Score = 28.9 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 157 SQKKRRPYVALFEKCCLIGCTKRSLAKYC 185
S +R P + ++CC C R L YC
Sbjct: 81 SSSRRAPQTGIVDECCFRSCDLRRLEMYC 109
>gi|163659903 insulin-like growth factor 1 isoform 3 preproprotein
[Homo sapiens]
Length = 195
Score = 28.9 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 157 SQKKRRPYVALFEKCCLIGCTKRSLAKYC 185
S +R P + ++CC C R L YC
Sbjct: 81 SSSRRAPQTGIVDECCFRSCDLRRLEMYC 109
>gi|163659901 insulin-like growth factor 1 isoform 2 preproprotein
[Homo sapiens]
Length = 137
Score = 28.9 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 157 SQKKRRPYVALFEKCCLIGCTKRSLAKYC 185
S +R P + ++CC C R L YC
Sbjct: 65 SSSRRAPQTGIVDECCFRSCDLRRLEMYC 93
>gi|163659899 insulin-like growth factor 1 isoform 1 preproprotein
[Homo sapiens]
Length = 158
Score = 28.9 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 157 SQKKRRPYVALFEKCCLIGCTKRSLAKYC 185
S +R P + ++CC C R L YC
Sbjct: 81 SSSRRAPQTGIVDECCFRSCDLRRLEMYC 109
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 28.5 bits (62), Expect = 3.4
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 63 PQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALKDS 122
PQTP + E + I ++++ I+ EF N PP LK E L PA +D
Sbjct: 488 PQTPSHLVEDLQDVIKQESDESGIVAEFQENGPPLLKKIKQEN--ILTSSVLMAPASEDE 545
Query: 123 NLSFEEF-----KKLIRNRQSEAADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLI 174
+ + F + L Q ++ P+ + S + R YV F L+
Sbjct: 546 DNVLKAFTVPKNRSLASPLQPCSSTWEPASCGKMEEQMTSSSQARKYVNAFSARTLV 602
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 28.5 bits (62), Expect = 3.4
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 28 KDDVIKLCGR--ELVRAQIAICGMSTW-SKRSLSQEDAPQTPRPV-AEIVPSFINKDTET 83
KD + +L + +L +AQ M W K + + QTP P E V + + ++ ++
Sbjct: 2445 KDKIAELNTKLSKLQKAQEESSAMMQWLQKMNKTATKWQQTPAPTDTEAVKTQVEQN-KS 2503
Query: 84 IIIMLEFIANLPPELKAALSE---RQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA 140
L+ N ELK L+E P PE ++ L + + ++E +L +RQ +
Sbjct: 2504 FEAELKQNVNKVQELKDKLTELLEENPDTPEAPRWKQMLTEIDSKWQELNQLTIDRQQKL 2563
Query: 141 ADSN 144
+S+
Sbjct: 2564 EESS 2567
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 28.5 bits (62), Expect = 3.4
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 28 KDDVIKLCGR--ELVRAQIAICGMSTW-SKRSLSQEDAPQTPRPV-AEIVPSFINKDTET 83
KD + +L + +L +AQ M W K + + QTP P E V + + ++ ++
Sbjct: 2456 KDKIAELNTKLSKLQKAQEESSAMMQWLQKMNKTATKWQQTPAPTDTEAVKTQVEQN-KS 2514
Query: 84 IIIMLEFIANLPPELKAALSE---RQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA 140
L+ N ELK L+E P PE ++ L + + ++E +L +RQ +
Sbjct: 2515 FEAELKQNVNKVQELKDKLTELLEENPDTPEAPRWKQMLTEIDSKWQELNQLTIDRQQKL 2574
Query: 141 ADSN 144
+S+
Sbjct: 2575 EESS 2578
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 28.5 bits (62), Expect = 3.4
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 28 KDDVIKLCGR--ELVRAQIAICGMSTW-SKRSLSQEDAPQTPRPV-AEIVPSFINKDTET 83
KD + +L + +L +AQ M W K + + QTP P E V + + ++ ++
Sbjct: 2594 KDKIAELNTKLSKLQKAQEESSAMMQWLQKMNKTATKWQQTPAPTDTEAVKTQVEQN-KS 2652
Query: 84 IIIMLEFIANLPPELKAALSE---RQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA 140
L+ N ELK L+E P PE ++ L + + ++E +L +RQ +
Sbjct: 2653 FEAELKQNVNKVQELKDKLTELLEENPDTPEAPRWKQMLTEIDSKWQELNQLTIDRQQKL 2712
Query: 141 ADSN 144
+S+
Sbjct: 2713 EESS 2716
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 28.5 bits (62), Expect = 3.4
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 28 KDDVIKLCGR--ELVRAQIAICGMSTW-SKRSLSQEDAPQTPRPV-AEIVPSFINKDTET 83
KD + +L + +L +AQ M W K + + QTP P E V + + ++ ++
Sbjct: 2416 KDKIAELNTKLSKLQKAQEESSAMMQWLQKMNKTATKWQQTPAPTDTEAVKTQVEQN-KS 2474
Query: 84 IIIMLEFIANLPPELKAALSE---RQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA 140
L+ N ELK L+E P PE ++ L + + ++E +L +RQ +
Sbjct: 2475 FEAELKQNVNKVQELKDKLTELLEENPDTPEAPRWKQMLTEIDSKWQELNQLTIDRQQKL 2534
Query: 141 ADSN 144
+S+
Sbjct: 2535 EESS 2538
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 28.5 bits (62), Expect = 3.4
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 28 KDDVIKLCGR--ELVRAQIAICGMSTW-SKRSLSQEDAPQTPRPV-AEIVPSFINKDTET 83
KD + +L + +L +AQ M W K + + QTP P E V + + ++ ++
Sbjct: 2090 KDKIAELNTKLSKLQKAQEESSAMMQWLQKMNKTATKWQQTPAPTDTEAVKTQVEQN-KS 2148
Query: 84 IIIMLEFIANLPPELKAALSE---RQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA 140
L+ N ELK L+E P PE ++ L + + ++E +L +RQ +
Sbjct: 2149 FEAELKQNVNKVQELKDKLTELLEENPDTPEAPRWKQMLTEIDSKWQELNQLTIDRQQKL 2208
Query: 141 ADSN 144
+S+
Sbjct: 2209 EESS 2212
>gi|4758440 glia maturation factor, gamma [Homo sapiens]
Length = 142
Score = 28.5 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 77 INKDTETIIIMLEFIANLPPELKAALSERQP 107
++KD + +++ EF P ELK L ERQP
Sbjct: 36 VDKDRQMVVLEEEFQNISPEELKMELPERQP 66
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,140,280
Number of Sequences: 37866
Number of extensions: 300515
Number of successful extensions: 1064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1020
Number of HSP's gapped (non-prelim): 68
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.