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Search of human proteins with 57863314
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
(355 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 739 0.0
gi|13375926 vacuolar protein sorting 37B [Homo sapiens] 166 4e-41
gi|117938318 vacuolar protein sorting 37D [Homo sapiens] 131 8e-31
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 82 6e-16
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 82 6e-16
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 82 6e-16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 82 6e-16
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 81 2e-15
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 80 2e-15
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 80 2e-15
gi|223555921 hepatocellular carcinoma related protein 1 isoform ... 79 6e-15
gi|223555919 hepatocellular carcinoma related protein 1 isoform ... 79 6e-15
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 79 8e-15
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 79 8e-15
gi|160707881 formin 2 [Homo sapiens] 79 8e-15
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 77 3e-14
gi|150417989 cyclin K isoform 1 [Homo sapiens] 77 3e-14
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 76 4e-14
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 75 7e-14
gi|163965366 nascent polypeptide-associated complex alpha subuni... 75 1e-13
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 74 2e-13
gi|118498339 EMI domain containing 2 [Homo sapiens] 74 2e-13
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 74 3e-13
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 73 4e-13
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 73 4e-13
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 73 4e-13
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 72 6e-13
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 72 1e-12
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 72 1e-12
gi|110832843 TBP-associated factor 4 [Homo sapiens] 71 1e-12
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 739 bits (1907), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 METLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPL 60
METLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPL
Sbjct: 1 METLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPL 60
Query: 61 EISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAE 120
EISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAE
Sbjct: 61 EISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAE 120
Query: 121 KFLEGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVR 180
KFLEGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVR
Sbjct: 121 KFLEGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVR 180
Query: 181 PVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGP 240
PVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGP
Sbjct: 181 PVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGP 240
Query: 241 LGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQS 300
LGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQS
Sbjct: 241 LGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQS 300
Query: 301 PYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWPGY 355
PYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWPGY
Sbjct: 301 PYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWPGY 355
>gi|13375926 vacuolar protein sorting 37B [Homo sapiens]
Length = 285
Score = 166 bits (419), Expect = 4e-41
Identities = 122/332 (36%), Positives = 171/332 (51%), Gaps = 66/332 (19%)
Query: 8 TLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEISRSNL 67
+L +L EL D + ++ + E Q++QL +EM LA+NRSLAE NL +Q L+ ++ L
Sbjct: 14 SLVQLNELLEDEGQLTEMVQKMEETQNVQLNKEMTLASNRSLAEGNLLYQPQLDTLKARL 73
Query: 68 SDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEV 127
+ +YQEL+ L E Q +K KL++ SS+ TLL LLQ EG KIEE++E MAEKFL+GE+
Sbjct: 74 TQKYQELQVLFEAYQIKKTKLDRQSSSASLETLLALLQAEGAKIEEDTENMAEKFLDGEL 133
Query: 128 PLETFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVRPVPQGTP 187
PL++F++ + S R L+H+RRV++EKLQE+V K + R P + P+P P
Sbjct: 134 PLDSFIDVYQSKRKLAHMRRVKIEKLQEMVLKGQ------------RLPQALAPLP---P 178
Query: 188 PVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPA 247
+ E P PL PYP P + P A +PP P PV +G L + A
Sbjct: 179 RLPELAPTAPL---PYPAPEASGPP----AVAPRRIPPPPPPVP------AGRLATPFTA 225
Query: 248 AQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQ--SPYPAT 305
A S +++P YPG P P R G G+ Q SPYP
Sbjct: 226 AM-----------SSGQAVP----YPGLQC----PPLPPRVGLPTQQGFSSQFVSPYP-- 264
Query: 306 GGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPG 337
PP P +P P PP+ PG
Sbjct: 265 ---PPLPQRPP------------PRLPPHQPG 281
Score = 29.6 bits (65), Expect = 4.3
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 8/47 (17%)
Query: 312 PIQPQLPSFPGQPQPSVPLQPPYPPGPAPPY----GFPPPPGPAWPG 354
P+ P+LP P+ PL P P PP PPPP P G
Sbjct: 175 PLPPRLPELA----PTAPLPYPAPEASGPPAVAPRRIPPPPPPVPAG 217
>gi|117938318 vacuolar protein sorting 37D [Homo sapiens]
Length = 251
Score = 131 bits (330), Expect = 8e-31
Identities = 88/229 (38%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 11 ELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEISRSNLSDR 70
+L +L D +D++ S + Q LQLERE LA+N +LA+ NL + LE+ R+ L+ +
Sbjct: 26 QLRDLLQDEPKLDRIVRLSRKFQGLQLEREACLASNYALAKENLALRPRLEMGRAALAIK 85
Query: 71 YQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLE 130
YQELR++ E C ++ +LE+ P L LQ E + E+E+E E+ L GE LE
Sbjct: 86 YQELREVAENCADKLQRLEESMHRWSPHCALGWLQAELEEAEQEAEEQMEQLLLGEQSLE 145
Query: 131 TFLENFSSMRMLSHLRRVRVEKLQEVVRKPRASQELA--GDAPPPRPPPPVRPVPQGT-- 186
FL F R L+HLRR + EKLQE++R+ S + A A PP+ P +P G
Sbjct: 146 AFLPAFQRGRALAHLRRTQAEKLQELLRRRERSAQPAPTSAADPPKSFPAAAVLPTGAAR 205
Query: 187 -PPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQP 234
PP V + PPL P P P SP P+GP P P SQP
Sbjct: 206 GPPAV-PRSLPPLDSRPVP-PLKGSPGCPLGPA------PLLSPRPSQP 246
Score = 33.5 bits (75), Expect = 0.30
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 225 PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGY 284
PAP P ++PAA + P GAA + RS+PP P P+ S PG
Sbjct: 181 PAPTSAADPPK--------SFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGS-PGC 231
Query: 285 PLRGGRAPSPGYPQQSP 301
PL SP Q P
Sbjct: 232 PLGPAPLLSPRPSQPEP 248
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 292 PSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPA 351
P +P + P + P + LP +P P + P P GPAP P P P
Sbjct: 189 PPKSFPAAAVLPTGAARGPPAVPRSLPPLDSRPVPPLKGSPGCPLGPAPLLS-PRPSQPE 247
Query: 352 WP 353
P
Sbjct: 248 PP 249
Score = 29.3 bits (64), Expect = 5.6
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 263 QRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG 322
+RS P P P + L G A P +S P +P P L PG
Sbjct: 176 ERSAQPAPTSAADPPKSFPAAAVLPTGAARGPPAVPRS-LPPLDSRPV----PPLKGSPG 230
Query: 323 QPQPSVPLQPPYPPGPAPPY 342
P PL P P P PP+
Sbjct: 231 CPLGPAPLLSPRPSQPEPPH 250
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 82.4 bits (202), Expect = 6e-16
Identities = 108/378 (28%), Positives = 151/378 (39%), Gaps = 60/378 (15%)
Query: 9 LQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEISRSNLS 68
LQ L ++ND EA P+ L E + +++ A+ + + + L+I L
Sbjct: 405 LQHLLLVRNDYEA-------RPQYYKLIEECISQIVLHKNGADPDFKCRH-LQIEIEGLI 456
Query: 69 DRYQELRKLVERCQEQKAKLEK-FSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEV 127
D+ + K VE+ + + A+LEK S L T LQVE K+E + E + +
Sbjct: 457 DQMIDKTK-VEKSEAKAAELEKKLDSEL---TARHELQVEMKKMESDFEQKLQDLQGEKD 512
Query: 128 PLETFLENFSSMRM-----LSHLRR--VRVEKLQEVVRKPRASQELAGDAPPPRPP---- 176
L + + ++ + +S L ++ K E +K AS A PP P
Sbjct: 513 ALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAP 572
Query: 177 -PPVRPVPQGTPPVVEEQPQP--PLAMPPYPLPYSPSPSLPVG------PTAHGALPPAP 227
PP P+P + ++ P P PP P P P P LP G P+ G +P
Sbjct: 573 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISP 632
Query: 228 FPVVSQPSFYSGPL----GPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
P +S + P G P+ P G A +PP P PG+ P
Sbjct: 633 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA---------IPPPPPLPGSAR-IPPPP 682
Query: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSV----PLQPPYPPG-- 337
PL G P P P P G PP P P LP PG P P P PP PPG
Sbjct: 683 PPLPGSAGIPPPPP---PLPGEAGMPPPP--PPLPGGPGIPPPPPFPGGPGIPPPPPGMG 737
Query: 338 --PAPPYGFPPPPGPAWP 353
P PP+GF P P P
Sbjct: 738 MPPPPPFGFGVPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 82.4 bits (202), Expect = 6e-16
Identities = 108/378 (28%), Positives = 151/378 (39%), Gaps = 60/378 (15%)
Query: 9 LQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEISRSNLS 68
LQ L ++ND EA P+ L E + +++ A+ + + + L+I L
Sbjct: 414 LQHLLLVRNDYEA-------RPQYYKLIEECISQIVLHKNGADPDFKCRH-LQIEIEGLI 465
Query: 69 DRYQELRKLVERCQEQKAKLEK-FSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEV 127
D+ + K VE+ + + A+LEK S L T LQVE K+E + E + +
Sbjct: 466 DQMIDKTK-VEKSEAKAAELEKKLDSEL---TARHELQVEMKKMESDFEQKLQDLQGEKD 521
Query: 128 PLETFLENFSSMRM-----LSHLRR--VRVEKLQEVVRKPRASQELAGDAPPPRPP---- 176
L + + ++ + +S L ++ K E +K AS A PP P
Sbjct: 522 ALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAP 581
Query: 177 -PPVRPVPQGTPPVVEEQPQP--PLAMPPYPLPYSPSPSLPVG------PTAHGALPPAP 227
PP P+P + ++ P P PP P P P P LP G P+ G +P
Sbjct: 582 VPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISP 641
Query: 228 FPVVSQPSFYSGPL----GPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
P +S + P G P+ P G A +PP P PG+ P
Sbjct: 642 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA---------IPPPPPLPGSAR-IPPPP 691
Query: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSV----PLQPPYPPG-- 337
PL G P P P P G PP P P LP PG P P P PP PPG
Sbjct: 692 PPLPGSAGIPPPPP---PLPGEAGMPPPP--PPLPGGPGIPPPPPFPGGPGIPPPPPGMG 746
Query: 338 --PAPPYGFPPPPGPAWP 353
P PP+GF P P P
Sbjct: 747 MPPPPPFGFGVPAAPVLP 764
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 82.4 bits (202), Expect = 6e-16
Identities = 71/195 (36%), Positives = 73/195 (37%), Gaps = 51/195 (26%)
Query: 168 GDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPS---LP---VGPTAHG 221
G A P PPPP P G P P+PPL P P P P P LP GP G
Sbjct: 219 GPAGPGGPPPPF---PAGQTP-----PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRG 270
Query: 222 ALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG 281
PP P QP F PLGP P GP PP PGY
Sbjct: 271 DRPPPPVLFPGQP-FGQPPLGPLPP----GPP-------------PPVPGY--------- 303
Query: 282 PGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAP- 340
G P P PQQ P P G PP P P P P P +P PP P PAP
Sbjct: 304 -------GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPH 356
Query: 341 --PYGFPPPPGPAWP 353
P FPPP P
Sbjct: 357 VNPAFFPPPTNSGMP 371
Score = 80.9 bits (198), Expect = 2e-15
Identities = 70/184 (38%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 172 PPRPP--PPVRPVPQGTPPVVEEQPQPPLAMPP----YPLPYSPSPSLPVGPTAHGALPP 225
PPRPP PP P P G PP + P PPLA PP P P P P G G LPP
Sbjct: 236 PPRPPLGPPGPPGPPGPPPPGQVLP-PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP 294
Query: 226 APFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPG-YPGTPMGASGPGY 284
P P V Y P GP P Q GP PP PG +P P G GP
Sbjct: 295 GPPPPVPG---YGPPPGP--PPPQQGP--------------PPPPGPFPPRPPGPLGPPL 335
Query: 285 PLRGGRAPSPGYPQQSPYPATGGKPPYP-IQPQLPSFPGQPQPSVPLQPPYPPGPAPPYG 343
L AP P P P G PP P + P FP +P P P PYG
Sbjct: 336 TL----AP----PPHLPGPPPGAPPPAPHVNPAF--FPPPTNSGMPTSDSRGPPPTDPYG 385
Query: 344 FPPP 347
PPP
Sbjct: 386 RPPP 389
Score = 61.2 bits (147), Expect = 1e-09
Identities = 53/148 (35%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 208 SPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMP 267
S + P G G P A V + GP GP P P P
Sbjct: 192 SSRAAFPQGGRGRGRFPGA----VPGGDRFPGPAGPGGPPPPF-----------PAGQTP 236
Query: 268 PRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQP--Q 325
PRP P P G GP P G+ P P P P G +PP P+ FPGQP Q
Sbjct: 237 PRP--PLGPPGPPGPPGPPPPGQVLPP--PLAGP-PNRGDRPPPPVL-----FPGQPFGQ 286
Query: 326 PSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P + PP PP P P YG PPPGP P
Sbjct: 287 PPLGPLPPGPPPPVPGYG--PPPGPPPP 312
Score = 45.8 bits (107), Expect = 6e-05
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 271 GYPGTPMGASGPGYPLRG-GRAPSPGYP---QQSPYPATGGKPPYPIQPQLPSFP-GQPQ 325
G G P G+S +P G GR PG + P PA G PP P FP GQ
Sbjct: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPP-------PPFPAGQTP 236
Query: 326 PSVPLQPPYPPGPAPPYGFPPPPGPAWPG 354
P PL PP PPG PPGP PG
Sbjct: 237 PRPPLGPPGPPG---------PPGPPPPG 256
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 82.4 bits (202), Expect = 6e-16
Identities = 80/231 (34%), Positives = 90/231 (38%), Gaps = 41/231 (17%)
Query: 151 EKLQEVVRKPRASQELAGDAPPPRP--------PPPVRPVPQGTPPVVEEQPQ--PPLAM 200
+ L E V + + +AG+ P P PPP PQG PP +PQ PP
Sbjct: 17 QNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 76
Query: 201 PPYPLPY-----SP--SPSLPVGPTAHGA------LPPAPFPVVSQPSFYSGPLGPTYPA 247
P P P SP P P GP G PP P P + P GP P
Sbjct: 77 PQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPG 136
Query: 248 AQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGG 307
GP S SP RS P +P P P G + P G P PG PQ P GG
Sbjct: 137 KPQGPPPQGDKSRSP-RSPPGKPQGP-PPQGGNQP-----QGPPPPPGKPQGP--PPQGG 187
Query: 308 K----PPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAP-----PYGFPPPPG 349
K PP P +PQ P G S P P GP P P G PPPPG
Sbjct: 188 KKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPG 238
Score = 81.3 bits (199), Expect = 1e-15
Identities = 79/238 (33%), Positives = 89/238 (37%), Gaps = 50/238 (21%)
Query: 156 VVRKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS--- 210
+ P+ G+ P PPPP +P QG PP +PQ PP P P P
Sbjct: 32 IAGNPQGPSPQGGNKPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRS 89
Query: 211 ----PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSW 260
P P GP G PP P P + P GP P GP S
Sbjct: 90 PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSR 149
Query: 261 SPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGK----PPYPIQPQ 316
SP RS P +P P P G + P P P PG PQ P GGK PP P +PQ
Sbjct: 150 SP-RSPPGKPQGP-PPQGGNQPQGP-----PPPPGKPQGPP--PQGGKKPQGPPPPGKPQ 200
Query: 317 LP-----------SFPGQPQ---------PSVPLQPPYPPGPAPPYGFPPPPGPAWPG 354
P S PG+PQ P P PP P PP G P GP PG
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 258
Score = 73.2 bits (178), Expect = 3e-13
Identities = 64/200 (32%), Positives = 78/200 (39%), Gaps = 20/200 (10%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPT 218
KP+ G+ P PPPP +P QG PP +PQ P PP P P P G
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNRPQGP---PPPGKPQGPPPQ---GDK 147
Query: 219 AHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMG 278
+ P P P + P GP P + P+G + PP PG P G
Sbjct: 148 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK--PQGPPPQGGKKPQGPPP----PGKPQG 201
Query: 279 ASGPGYPLRGGRAPSPGYPQQSPYPATG----GKPPYPIQPQLPSFPGQPQPSVPLQPPY 334
G R ++P PG PQ P P G G PP P +PQ P G +P P P
Sbjct: 202 PPPQGDKSRSSQSP-PGKPQGPP-PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 259
Query: 335 PPGPAPPYGFPPPPGPAWPG 354
P GP G + PG
Sbjct: 260 PQGPPAQGGSKSQSARSPPG 279
Score = 71.6 bits (174), Expect = 1e-12
Identities = 57/177 (32%), Positives = 67/177 (37%), Gaps = 23/177 (12%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS------ 210
KP+ G+ P PPPP +P QG PP ++PQ PP P P P
Sbjct: 157 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQS 214
Query: 211 -PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQ 263
P P GP G PP P P + P GP P GP G
Sbjct: 215 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA 274
Query: 264 RSMPPRPGYPGTPMGASGPGYPLRGG------RAPSPGYPQQSPYPATGGKPPYPIQ 314
RS P +P P G + G P G +AP G PQ P P GG+P P Q
Sbjct: 275 RSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 80.9 bits (198), Expect = 2e-15
Identities = 77/235 (32%), Positives = 86/235 (36%), Gaps = 48/235 (20%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS------ 210
KP+ G+ P PPPP +P QG PP +PQ PP P P P
Sbjct: 56 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 113
Query: 211 -PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQ 263
P P GP G PP P P + P GP P GP
Sbjct: 114 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSS 173
Query: 264 RSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKP---PYPIQPQLP-- 318
RS P +P P P G + P P P PG PQ P P G KP P P +PQ P
Sbjct: 174 RSPPGKPQGP-PPQGGNQPQGP-----PPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPPP 226
Query: 319 ----------SFPGQPQ---------PSVPLQPPYPPGPAPPYGFPPPPGPAWPG 354
S PG+PQ P P PP P PP G P GP PG
Sbjct: 227 QGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 281
Score = 80.9 bits (198), Expect = 2e-15
Identities = 77/236 (32%), Positives = 87/236 (36%), Gaps = 49/236 (20%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS------ 210
KP+ G+ P PPPP +P QG PP +PQ PP P P P +
Sbjct: 117 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSR 174
Query: 211 --PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSP 262
P P GP G PP P P + P GP P GP
Sbjct: 175 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQS 234
Query: 263 QRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKP---PYPIQPQLP- 318
RS P +P P P G + P P P PG PQ P P G KP P P +PQ P
Sbjct: 235 ARSPPGKPQGP-PPQGGNQPQGP-----PPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPP 287
Query: 319 -----------SFPGQPQ---------PSVPLQPPYPPGPAPPYGFPPPPGPAWPG 354
S PG+PQ P P PP P PP G P GP PG
Sbjct: 288 PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343
Score = 76.3 bits (186), Expect = 4e-14
Identities = 79/240 (32%), Positives = 90/240 (37%), Gaps = 53/240 (22%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS------ 210
KP+ G+ P PPPP +P QG PP +PQ PP P P P +
Sbjct: 179 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSAR 236
Query: 211 --PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSP 262
P P GP G PP P P + P GP P GP G
Sbjct: 237 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRS 296
Query: 263 QRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKP---PYPIQPQLP- 318
RS P +P P P G + P P P PG PQ P P G KP P P +PQ P
Sbjct: 297 SRSPPGKPQGP-PPQGGNQPQGP-----PPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPP 349
Query: 319 -----------SFPGQPQP------SVPLQPPYPPG------PAPPYGFPP-PPGPAWPG 354
S PG+PQ + P PP P G APP G P PP P G
Sbjct: 350 PQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGG 409
Score = 75.1 bits (183), Expect = 9e-14
Identities = 72/217 (33%), Positives = 82/217 (37%), Gaps = 36/217 (16%)
Query: 162 ASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHG 221
++Q L D P + PQG PP +PQ P + P P P G G
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKP----QGPPPQGGNQPQG 70
Query: 222 ALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG 281
PP P P + P GP P GP S SP RS P +P P P G +
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP-RSPPGKPQGP-PPQGGNQ 128
Query: 282 PGYPLRGGRAPSPGYPQQSPYPATGGKP---PYPIQPQLP------------SFPGQPQ- 325
P P P PG PQ P P G KP P P +PQ P S PG+PQ
Sbjct: 129 PQGP-----PPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182
Query: 326 --------PSVPLQPPYPPGPAPPYGFPPPPGPAWPG 354
P P PP P PP G P GP PG
Sbjct: 183 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 219
Score = 70.9 bits (172), Expect = 2e-12
Identities = 58/178 (32%), Positives = 67/178 (37%), Gaps = 24/178 (13%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS------ 210
KP+ G+ P PPPP +P QG PP +PQ PP P P P S
Sbjct: 241 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSR 298
Query: 211 --PSLPVGPTAHGAL------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSP 262
P P GP G PP P P + P GP P GP G
Sbjct: 299 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRS 358
Query: 263 QRSMPPRPGYPGTPMGASGPGYPLRGG------RAPSPGYPQQSPYPATGGKPPYPIQ 314
RS P +P P G + G P G +AP G PQ P P GG+P P Q
Sbjct: 359 ARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 416
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 80.5 bits (197), Expect = 2e-15
Identities = 65/178 (36%), Positives = 69/178 (38%), Gaps = 17/178 (9%)
Query: 171 PPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPV 230
PPPRP P P PQG + P P P P P + S GP H P P P
Sbjct: 134 PPPRPGKPEGPPPQGGNQ--SQGPPPRPGKPEGPPPQGGNQSQ--GPPPHPGKPEGPPPQ 189
Query: 231 VSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGR 290
S GP P P GP G + + PPRPG P P G G
Sbjct: 190 GGNQS--QGP--PPRPGKPEGPPPQGG---NQSQGPPPRPGKPEGPPSQGGNKPQ---GP 239
Query: 291 APSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
P PG PQ P P G KP P P P G P P Q P PP P G PPPP
Sbjct: 240 PPHPGKPQGPP-PQEGNKPQRPPPPGRPQ--GPPPPGGNPQQPLPPPAGKPQGPPPPP 294
Score = 75.1 bits (183), Expect = 9e-14
Identities = 65/198 (32%), Positives = 75/198 (37%), Gaps = 20/198 (10%)
Query: 159 KPRASQELAGD---APPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPV 215
KP G+ PPPRP P P PQG + P P P P P + S
Sbjct: 98 KPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQ--SQGPPPRPGKPEGPPPQGGNQSQ-- 153
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGT 275
GP P P P S GP P +P GP G + + PPRPG P
Sbjct: 154 GPPPRPGKPEGPPPQGGNQS--QGP--PPHPGKPEGPPPQGG---NQSQGPPPRPGKPEG 206
Query: 276 PMGASGPGYPLRGGRAPSPGYPQQSPYPATG---GKPPYPIQPQLPSFPGQPQPSVPLQP 332
P G G P PG P+ P G PP+P +PQ P +P P P
Sbjct: 207 PPPQGGNQSQ---GPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP 263
Query: 333 PYPPGPAPPYGFPPPPGP 350
P GP PP G P P P
Sbjct: 264 GRPQGPPPPGGNPQQPLP 281
Score = 72.8 bits (177), Expect = 4e-13
Identities = 72/245 (29%), Positives = 85/245 (34%), Gaps = 60/245 (24%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMP----------------P 202
KP + G+ P PPPP +P +G PP Q Q P P P
Sbjct: 35 KPEGRRPQGGNQPQRTPPPPGKP--EGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 92
Query: 203 YPLPYSPSPSLPVGPTAHGALPPAPF-PVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWS 261
P P P P G PP P P P + GP P P G +
Sbjct: 93 PPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP--PPRPGKPEGPPPQGGN 150
Query: 262 PQRSMPPRPG------------------YPGTPMGASGPGYPLRGGRAPSPGYPQQSPYP 303
+ PPRPG +PG P G G G P PG P+ P P
Sbjct: 151 QSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP-P 209
Query: 304 ATG----GKPPYPIQPQ------------LPSFPGQPQPSVPLQ---PPYPPGPAPPYGF 344
G G PP P +P+ P PG+PQ P + P PP P P G
Sbjct: 210 QGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQG- 268
Query: 345 PPPPG 349
PPPPG
Sbjct: 269 PPPPG 273
Score = 65.1 bits (157), Expect = 9e-11
Identities = 54/161 (33%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 171 PPPRPPPPVRPVPQGT-----PPVVEEQPQPP------LAMPPYPLPYSPSPSLPVGPTA 219
PPPRP P P PQG PP +P+ P + P P P P P G
Sbjct: 155 PPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 214
Query: 220 HGALPPAPFPVVSQPSFYSG-PLGPT-YPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPM 277
PP P PS P GP +P GP G + P RP PG P
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEG-------NKPQRPPPPGRPQ 267
Query: 278 GASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLP 318
G PG + P G PQ P P GG+P P Q Q P
Sbjct: 268 GPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 47.4 bits (111), Expect = 2e-05
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 262 PQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATG----GKPPYPIQPQ- 316
PQR+ PP PG P G G G P PG P+ P P G G PP P +P+
Sbjct: 47 PQRTPPP----PGKPEGRPPQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGKPEG 101
Query: 317 LPSFPGQPQPSVPLQPPYPPGPAPPYGFP---PPPGPAWP 353
P G P +P P GP P G PPP P P
Sbjct: 102 QPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 141
Score = 46.2 bits (108), Expect = 4e-05
Identities = 38/110 (34%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 252 PRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATG----G 307
P G + + PPRPG P P G G P PG P+ P P G G
Sbjct: 57 PEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ---GPPPRPGKPEGQP-PQGGNQSQG 112
Query: 308 KPPYPIQPQLPSFPGQPQPS-VPLQPPYPPGPAPPYGFP---PPPGPAWP 353
PP P +P+ P G Q P +P P GP P G PPP P P
Sbjct: 113 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 162
Score = 28.5 bits (62), Expect = 9.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPP 202
+P+ G+ P PPP +P PP +PP PP
Sbjct: 265 RPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 80.5 bits (197), Expect = 2e-15
Identities = 81/228 (35%), Positives = 93/228 (40%), Gaps = 37/228 (16%)
Query: 157 VRKPRASQEL-AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPP---LAMPPYPLPYSPSPS 212
+ KP A L AG RPPPP+ PP+ E P PP L +PP P P P+PS
Sbjct: 214 MEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMP-PTGPAPS 272
Query: 213 LPVG-----PTAHGALPPAPFPVVSQPSFYSGPLGP-TYPAAQLGPRGAAGYSWSPQRSM 266
P G P A G PPA PVV P+ P P +P A A G
Sbjct: 273 GPPGPPQLPPPAPGVHPPA--PVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
Query: 267 PPRPGY----PGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYP--------IQ 314
PP PG PG A G P G P+PG P P+ G P P +
Sbjct: 331 PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGV---HPPPSAGVHPQAPGVHPAAPAVH 387
Query: 315 PQLPSF----PGQPQPSVPLQPPYPPG--PAPPYGFPPPPG--PAWPG 354
PQ P PG P P P PPG P+ P P PPG P+ PG
Sbjct: 388 PQAPGVHPPAPGM-HPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPG 434
Score = 58.2 bits (139), Expect = 1e-08
Identities = 61/173 (35%), Positives = 71/173 (41%), Gaps = 24/173 (13%)
Query: 170 APPPRPPPPV--RPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAP 227
AP PP P P P PP P P PP P + P+P V P A G PPAP
Sbjct: 305 APGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPG--VHPPAPGVHPPAP 362
Query: 228 FPVVSQPSFYSGPLGP-TYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG-YP 285
V PS P P +PAA A G PP PG M PG +P
Sbjct: 363 -GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVH-------PPAPG-----MHPQAPGVHP 409
Query: 286 LRGGRAPS-PGYPQQSP--YPATGG-KPPYPIQPQL-PSFPGQPQPSVPLQPP 333
G PS PG Q P +P+ G PP P+ P L P P + ++P PP
Sbjct: 410 QPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
>gi|223555921 hepatocellular carcinoma related protein 1 isoform 2
[Homo sapiens]
Length = 372
Score = 79.0 bits (193), Expect = 6e-15
Identities = 40/154 (25%), Positives = 83/154 (53%)
Query: 4 LKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEIS 63
L + ++ +L ++ E + + L P+++ + +++ + + LA +NL + LE
Sbjct: 209 LSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLEAK 268
Query: 64 RSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFL 123
R + D+Y+ L ++ +++ + + S + L L+V + EEES+ +AE FL
Sbjct: 269 RQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 328
Query: 124 EGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVV 157
EG++ ++ FL +F R + H RR + EKLQ+ +
Sbjct: 329 EGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQAI 362
>gi|223555919 hepatocellular carcinoma related protein 1 isoform 1
[Homo sapiens]
Length = 397
Score = 79.0 bits (193), Expect = 6e-15
Identities = 40/154 (25%), Positives = 83/154 (53%)
Query: 4 LKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREMALATNRSLAERNLEFQGPLEIS 63
L + ++ +L ++ E + + L P+++ + +++ + + LA +NL + LE
Sbjct: 234 LSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLEAK 293
Query: 64 RSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFL 123
R + D+Y+ L ++ +++ + + S + L L+V + EEES+ +AE FL
Sbjct: 294 RQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 353
Query: 124 EGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVV 157
EG++ ++ FL +F R + H RR + EKLQ+ +
Sbjct: 354 EGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQAI 387
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 78.6 bits (192), Expect = 8e-15
Identities = 80/268 (29%), Positives = 94/268 (35%), Gaps = 90/268 (33%)
Query: 171 PPPRP---------PPPVRPVPQ---------GTPPVV--EEQPQPPLAMPPYP------ 204
PPPRP PPPV P+ G+PPV QP P PP+P
Sbjct: 170 PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA 229
Query: 205 --------------LPYSPSPSLPVGPTAHGAL----PPAPFPVVSQPSFYSGPLGP--- 243
P+S P LP PT AL PP P PV ++PS + + P
Sbjct: 230 LGGGSIRQSPLSSSSPFSNRPPLP--PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPP 287
Query: 244 --TYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG------------------PG 283
P PR +A P P RPG P P +SG P
Sbjct: 288 QNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPP 347
Query: 284 YPLRGGRAPSPGYPQQSPYPA-------TGGKPP-------------YPIQPQLPSFPGQ 323
P G P P P + P P +G PP P PQLPS G
Sbjct: 348 LPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGV 407
Query: 324 PQPSVPLQPPYPPGPAPPYGFPPPPGPA 351
P +PP PP P G PPPP P+
Sbjct: 408 DSPRSGPRPPLPP-DRPSAGAPPPPPPS 434
Score = 64.3 bits (155), Expect = 2e-10
Identities = 64/187 (34%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPS-PSLPVGPT 218
P + A PP PPPP RP P PP + P +P L S S P LP P
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP-RLPQRNLSLSSSTPPLP-SPG 352
Query: 219 AHGALPPAPF----PVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYP- 273
G LPP P P V P SGPL P P ++ G S R++P P P
Sbjct: 353 RSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNG---------STSRALPATPQLPS 403
Query: 274 --GTPMGASGPGYPLRGGRAPSPGYPQQSPYPAT---GGKPPYPIQPQLPS-FPGQPQPS 327
G SGP PL R PS G P P P+T G P + + S F P
Sbjct: 404 RSGVDSPRSGPRPPLPPDR-PSAGAPPPPP-PSTSIRNGFQDSPCEDEWESRFYFHPISD 461
Query: 328 VPLQPPY 334
+P PY
Sbjct: 462 LPPPEPY 468
Score = 62.4 bits (150), Expect = 6e-10
Identities = 63/202 (31%), Positives = 75/202 (37%), Gaps = 19/202 (9%)
Query: 159 KPRASQELAGDAPPPRP---PPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPV 215
KP + G P P P P P PP + P ++PP P+P +P P +
Sbjct: 139 KPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP-PVPSTPRP-IQS 196
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP---RPGY 272
P G+ P P QPS GP P +P + G SP S P RP
Sbjct: 197 SPHNRGSPPVPGGP--RQPS--PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPL 252
Query: 273 PGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQP 332
P TP A P P P P PP P Q P P P+PS Q
Sbjct: 253 PPTPSRALDDKPP------PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQA 306
Query: 333 PYPPGPAPPYGFPPPPGPAWPG 354
P PP P P PPP P+ G
Sbjct: 307 P-PPPPPPSRPGPPPLPPSSSG 327
Score = 42.4 bits (98), Expect = 6e-04
Identities = 48/143 (33%), Positives = 55/143 (38%), Gaps = 18/143 (12%)
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPG-YP- 273
GP G L A P + + G + P L P G S P S P PG +P
Sbjct: 96 GPPGLGGLFQAGMPKLRSTANRDNDSGGSRPP--LLPPGGRSTSAKPF-SPPSGPGRFPV 152
Query: 274 GTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG--QPQPSVPLQ 331
+P SGP P R P P P G KP I P +PS P Q P
Sbjct: 153 PSPGHRSGPPEPQRNRMPP--------PRPDVGSKPD-SIPPPVPSTPRPIQSSPHNRGS 203
Query: 332 PPYPPGPAPPYGFPPPPGPAWPG 354
PP P GP P P P P +PG
Sbjct: 204 PPVPGGPRQPS--PGPTPPPFPG 224
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 78.6 bits (192), Expect = 8e-15
Identities = 80/268 (29%), Positives = 94/268 (35%), Gaps = 90/268 (33%)
Query: 171 PPPRP---------PPPVRPVPQ---------GTPPVV--EEQPQPPLAMPPYP------ 204
PPPRP PPPV P+ G+PPV QP P PP+P
Sbjct: 170 PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA 229
Query: 205 --------------LPYSPSPSLPVGPTAHGAL----PPAPFPVVSQPSFYSGPLGP--- 243
P+S P LP PT AL PP P PV ++PS + + P
Sbjct: 230 LGGGSIRQSPLSSSSPFSNRPPLP--PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPP 287
Query: 244 --TYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG------------------PG 283
P PR +A P P RPG P P +SG P
Sbjct: 288 QNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPP 347
Query: 284 YPLRGGRAPSPGYPQQSPYPA-------TGGKPP-------------YPIQPQLPSFPGQ 323
P G P P P + P P +G PP P PQLPS G
Sbjct: 348 LPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGV 407
Query: 324 PQPSVPLQPPYPPGPAPPYGFPPPPGPA 351
P +PP PP P G PPPP P+
Sbjct: 408 DSPRSGPRPPLPP-DRPSAGAPPPPPPS 434
Score = 64.3 bits (155), Expect = 2e-10
Identities = 64/187 (34%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPS-PSLPVGPT 218
P + A PP PPPP RP P PP + P +P L S S P LP P
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP-RLPQRNLSLSSSTPPLP-SPG 352
Query: 219 AHGALPPAPF----PVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYP- 273
G LPP P P V P SGPL P P ++ G S R++P P P
Sbjct: 353 RSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNG---------STSRALPATPQLPS 403
Query: 274 --GTPMGASGPGYPLRGGRAPSPGYPQQSPYPAT---GGKPPYPIQPQLPS-FPGQPQPS 327
G SGP PL R PS G P P P+T G P + + S F P
Sbjct: 404 RSGVDSPRSGPRPPLPPDR-PSAGAPPPPP-PSTSIRNGFQDSPCEDEWESRFYFHPISD 461
Query: 328 VPLQPPY 334
+P PY
Sbjct: 462 LPPPEPY 468
Score = 62.4 bits (150), Expect = 6e-10
Identities = 63/202 (31%), Positives = 75/202 (37%), Gaps = 19/202 (9%)
Query: 159 KPRASQELAGDAPPPRP---PPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPV 215
KP + G P P P P P PP + P ++PP P+P +P P +
Sbjct: 139 KPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP-PVPSTPRP-IQS 196
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP---RPGY 272
P G+ P P QPS GP P +P + G SP S P RP
Sbjct: 197 SPHNRGSPPVPGGP--RQPS--PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPL 252
Query: 273 PGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQP 332
P TP A P P P P PP P Q P P P+PS Q
Sbjct: 253 PPTPSRALDDKPP------PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQA 306
Query: 333 PYPPGPAPPYGFPPPPGPAWPG 354
P PP P P PPP P+ G
Sbjct: 307 P-PPPPPPSRPGPPPLPPSSSG 327
Score = 42.4 bits (98), Expect = 6e-04
Identities = 48/143 (33%), Positives = 55/143 (38%), Gaps = 18/143 (12%)
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPG-YP- 273
GP G L A P + + G + P L P G S P S P PG +P
Sbjct: 96 GPPGLGGLFQAGMPKLRSTANRDNDSGGSRPP--LLPPGGRSTSAKPF-SPPSGPGRFPV 152
Query: 274 GTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG--QPQPSVPLQ 331
+P SGP P R P P P G KP I P +PS P Q P
Sbjct: 153 PSPGHRSGPPEPQRNRMPP--------PRPDVGSKPD-SIPPPVPSTPRPIQSSPHNRGS 203
Query: 332 PPYPPGPAPPYGFPPPPGPAWPG 354
PP P GP P P P P +PG
Sbjct: 204 PPVPGGPRQPS--PGPTPPPFPG 224
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 78.6 bits (192), Expect = 8e-15
Identities = 70/201 (34%), Positives = 77/201 (38%), Gaps = 33/201 (16%)
Query: 166 LAGDAPPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAH 220
L G A PP PP P +P P P P PPL PP PLP + P P P A
Sbjct: 948 LPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA- 1006
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGAS 280
G PP P P P P P A + P P +PP P PG +
Sbjct: 1007 GIPPPPPLPGAGIPP------PPPLPGAGIPPPPPL-----PGAGIPPPPPLPGAGIP-- 1053
Query: 281 GPGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPG---QPQPS 327
P PL G P P G P P P G PP P+ P P PG P P
Sbjct: 1054 -PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP 1112
Query: 328 VPLQPPYPPGPAPPYGFPPPP 348
+P PP P P G PPPP
Sbjct: 1113 LPGAGIPPPPPLPGAGIPPPP 1133
Score = 78.2 bits (191), Expect = 1e-14
Identities = 70/207 (33%), Positives = 75/207 (36%), Gaps = 35/207 (16%)
Query: 166 LAGDAPPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAH 220
L G PP PP P +P P P P PPL PP PLP + P P P A
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA- 1094
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGT----- 275
G PP P P V P P P A + P P +PP P PG
Sbjct: 1095 GIPPPPPLPGVGIPP------PPPLPGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPP 1143
Query: 276 ---PMGASGPGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQPQLPSFPGQPQP 326
P P PL G P P G P P P G PP P LP P P
Sbjct: 1144 PPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPP----PPLPGVGIPPPP 1199
Query: 327 SVPLQPPYPPGPAPPYGFPPPPGPAWP 353
+P PP P P G PP P P P
Sbjct: 1200 PLPGAGIPPPPPLPGMGIPPAPAPPLP 1226
Score = 77.8 bits (190), Expect = 1e-14
Identities = 74/224 (33%), Positives = 83/224 (37%), Gaps = 51/224 (22%)
Query: 168 GDAPPPRPPPPVRPVPQGTPPVVEEQPQPP-------LAMPPYPLPYSPSPSLPVGPTAH 220
G PPP PP P VP + PQPP L PP PLP + P P P A
Sbjct: 874 GMVPPPPPPLPGMTVPTLPSTAI---PQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAG 930
Query: 221 ----------GALPPAPFP--VVSQPSFYSG---PLGPTYPAAQLGPRGAAGYSWSPQRS 265
G PP P P + P G PL P P A + P P
Sbjct: 931 ILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL-----PGAG 985
Query: 266 MPPRPGYPGT------PMGASG--PGYPLRGGRAPSP------GYPQQSPYPATGGKPPY 311
+PP P PG P+ +G P PL G P P G P P P G PP
Sbjct: 986 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1045
Query: 312 PIQ----PQLPSFPG---QPQPSVPLQPPYPPGPAPPYGFPPPP 348
P+ P P PG P P +P PP P P G PPPP
Sbjct: 1046 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1089
Score = 77.8 bits (190), Expect = 1e-14
Identities = 69/201 (34%), Positives = 76/201 (37%), Gaps = 33/201 (16%)
Query: 166 LAGDAPPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAH 220
L G PP PP P +P P P P PPL PP PLP + P P P A
Sbjct: 1003 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA- 1061
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGAS 280
G PP P P P P P A + P P +PP P PG +
Sbjct: 1062 GIPPPPPLPGAGIPP------PPPLPGAGIPPPPPL-----PGAGIPPPPPLPGVGIP-- 1108
Query: 281 GPGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPGQ---PQPS 327
P PL G P P G P P P G PP P+ P P PG P P
Sbjct: 1109 -PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP 1167
Query: 328 VPLQPPYPPGPAPPYGFPPPP 348
+P PP P P G PPPP
Sbjct: 1168 LPGAGIPPPPPLPGVGIPPPP 1188
Score = 77.4 bits (189), Expect = 2e-14
Identities = 70/204 (34%), Positives = 77/204 (37%), Gaps = 27/204 (13%)
Query: 171 PPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAHGALPP 225
PPP PP P +P P P P PPL PP PLP + P P P A LPP
Sbjct: 909 PPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPP 968
Query: 226 APFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGT------PMGA 279
P P P P P L G P +PP P PG P+
Sbjct: 969 -PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1027
Query: 280 SG--PGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPG---QP 324
+G P PL G P P G P P P G PP P+ P P PG P
Sbjct: 1028 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1087
Query: 325 QPSVPLQPPYPPGPAPPYGFPPPP 348
P +P PP P P G PPPP
Sbjct: 1088 PPPLPGAGIPPPPPLPGVGIPPPP 1111
Score = 76.6 bits (187), Expect = 3e-14
Identities = 74/217 (34%), Positives = 81/217 (37%), Gaps = 36/217 (16%)
Query: 167 AGDAPPPR------PPPPVRP---VPQGTP-PVVEEQPQPPL----AMPPYPLPYSPSPS 212
AG PPP PPPP P +P P P P PPL PP PLP + P
Sbjct: 940 AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 999
Query: 213 LPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGY 272
P P A G PP P P P P P L G P +PP P
Sbjct: 1000 PPPLPGA-GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1058
Query: 273 PGT------PMGASG--PGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ---- 314
PG P+ +G P PL G P P G P P P G PP P+
Sbjct: 1059 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGI 1118
Query: 315 PQLPSFPG---QPQPSVPLQPPYPPGPAPPYGFPPPP 348
P P PG P P +P PP P P G PPPP
Sbjct: 1119 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPP 1155
Score = 76.3 bits (186), Expect = 4e-14
Identities = 74/224 (33%), Positives = 82/224 (36%), Gaps = 47/224 (20%)
Query: 166 LAGDAPPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAH 220
L G PP PP P +P P P P PPL PP PLP + P P P A
Sbjct: 970 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA- 1028
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGT----- 275
G PP P P P P P A + P P +PP P PG
Sbjct: 1029 GIPPPPPLPGAGIPP------PPPLPGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPP 1077
Query: 276 -PMGASG--PGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPG 322
P+ +G P PL G P P G P P P G PP P+ P P PG
Sbjct: 1078 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1137
Query: 323 Q---PQPSVPLQPPYPPGPAPPYGFPPPP---------GPAWPG 354
P P +P PP P P G PPPP P PG
Sbjct: 1138 AGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1181
Score = 75.9 bits (185), Expect = 5e-14
Identities = 70/218 (32%), Positives = 81/218 (37%), Gaps = 36/218 (16%)
Query: 162 ASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPL---AMPPYPLPYSPSPSLPVGPT 218
+S + G P PPPP+ + T P PPL M P P P P +P P
Sbjct: 866 SSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPP 925
Query: 219 AHGA----LPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQ---RSMPPRPG 271
GA LPP P + P G P P P AG P +PP P
Sbjct: 926 LPGAGILPLPPLPGAGIPPPPPLPGAAIPPPP-----PLPGAGIPLPPPLPGAGIPPPPP 980
Query: 272 YPGT------PMGASG--PGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ--- 314
PG P+ +G P PL G P P G P P P G PP P+
Sbjct: 981 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1040
Query: 315 -PQLPSFPG---QPQPSVPLQPPYPPGPAPPYGFPPPP 348
P P PG P P +P PP P P G PPPP
Sbjct: 1041 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1078
Score = 74.7 bits (182), Expect = 1e-13
Identities = 62/191 (32%), Positives = 73/191 (38%), Gaps = 27/191 (14%)
Query: 173 PRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGA--LPPAPFPV 230
P PPP + P + P PP +P +P PS ++P P G LPP P P+
Sbjct: 856 PSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPL 915
Query: 231 VSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGR 290
P P P A + P P +PP P PG A P PL G
Sbjct: 916 PGAGI----PPPPPLPGAGILPLPPL-----PGAGIPPPPPLPGA---AIPPPPPLPGAG 963
Query: 291 APSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPGQ---PQPSVPLQPPYPPG 337
P P G P P P G PP P+ P P PG P P +P PP
Sbjct: 964 IPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1023
Query: 338 PAPPYGFPPPP 348
P P G PPPP
Sbjct: 1024 PLPGAGIPPPP 1034
Score = 73.6 bits (179), Expect = 3e-13
Identities = 69/202 (34%), Positives = 76/202 (37%), Gaps = 36/202 (17%)
Query: 166 LAGDAPPPRPPPPVRPVPQGTP-PVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAH 220
L G PP PP P +P P P P PPL PP PLP P P P A
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGA- 1116
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGAS 280
G PP P P P P P A + P P+ +PP P PG +
Sbjct: 1117 GIPPPPPLPGAGIPP------PPPLPGAGIPPPPPL-----PRVGIPPPPPLPGAGIP-- 1163
Query: 281 GPGYPLRGGRAPSP------GYPQQSPYPATGGKPPYPIQ----PQLPSFPGQ---PQPS 327
P PL G P P G P P P G PP P+ P P PG P P+
Sbjct: 1164 -PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPA 1222
Query: 328 VPLQPP---YPPGPAPPYGFPP 346
PL PP PP P P PP
Sbjct: 1223 PPLPPPGTGIPPPPLLPVSGPP 1244
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/221 (23%), Positives = 76/221 (34%), Gaps = 27/221 (12%)
Query: 137 SSMRMLSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVRPVP------------- 183
S ++ L++ + ++LQ +++ + Q+L G P PP V P P
Sbjct: 197 SDIQQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLLGP 256
Query: 184 ---QGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALP--PAPFPVVSQPSFYS 238
G P + Q A+ P + P P P + G LP AP +QP+
Sbjct: 257 SGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKD 316
Query: 239 GPLGPTYPAAQLGP----RGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSP 294
P +P + GP GA + P G+ G + G
Sbjct: 317 SPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQ 376
Query: 295 GYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYP 335
++ A G P P S PG P PS PYP
Sbjct: 377 RLGEEPEEEAQG-----PDAPAAASLPGSPAPSQRCFKPYP 412
Score = 42.0 bits (97), Expect = 8e-04
Identities = 55/212 (25%), Positives = 66/212 (31%), Gaps = 37/212 (17%)
Query: 169 DAPPPRPPPPVRPVPQGTPPVVEEQPQPP------LAMPPYPLPYSPSPSLPVGPTAHGA 222
D P RPP PP E PQ L + P + P +
Sbjct: 761 DGLPGRPP---------CPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPP 811
Query: 223 LPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGP 282
PP+ Q S P Q + ++ ++P P P T +S P
Sbjct: 812 PPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMP 871
Query: 283 GY--------PLRGGRAP---SPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQ 331
G PL G P S PQ P T PP P P LP P P +P
Sbjct: 872 GLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPP--PPLPGAGIPPPPPLPGA 929
Query: 332 PPYPPGPAPPYGFPPPP---------GPAWPG 354
P P P G PPPP P PG
Sbjct: 930 GILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 961
Score = 40.0 bits (92), Expect = 0.003
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 23/122 (18%)
Query: 168 GDAPPPRPP----PPVRPVP-QGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGA 222
G PPP P PP P+P G PP P P + +PP P P P P
Sbjct: 1183 GIPPPPPLPGVGIPPPPPLPGAGIPP---PPPLPGMGIPPAPAPPLPPPGT--------G 1231
Query: 223 LPPAPFPVVSQPSFYSGPLGPTYPAAQLG-------PRGAAGYSWSPQRSMPPRPGYPGT 275
+PP P VS P T P Q+ P G G + + +P P
Sbjct: 1232 IPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCR 1291
Query: 276 PM 277
PM
Sbjct: 1292 PM 1293
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 76.6 bits (187), Expect = 3e-14
Identities = 71/205 (34%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 171 PPPRPPPPVRPVPQGTPPVVE----EQPQPP---LAMPPYPLPYSPSPSLPVGPTAHGAL 223
PPP+ PPP +P P PP + +QP PP + P P+P + P A +
Sbjct: 72 PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSA 131
Query: 224 PPAPFPVVSQPSFYSGPLGPT---YPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGAS 280
PPA P P SGP GPT PA P GA PP G P TP A
Sbjct: 132 PPATPPTSGAPP-GSGP-GPTPTPPPAVTSAPPGA-------PPPTPPSSGVPTTPPQAG 182
Query: 281 GPGYPLRGGRAPSPGYPQQSPYPA--TGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGP 338
GP P P PG P+Q P P GGK P P+ PG P +PP+ G
Sbjct: 183 GPPPPPAAVPGPGPG-PKQGPGPGGPKGGK--MPGGPKPGGGPGLSTPGGHPKPPHRGGG 239
Query: 339 A--------PPY-----GFPPPPGP 350
PPY PPP GP
Sbjct: 240 EPRGGRQHHPPYHQQHHQGPPPGGP 264
Score = 66.2 bits (160), Expect = 4e-11
Identities = 55/176 (31%), Positives = 61/176 (34%), Gaps = 35/176 (19%)
Query: 175 PPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQP 234
P PP+ P PP ++Q QPP PP P P P P PP P P Q
Sbjct: 56 PKPPIPP-----PPPHQQQQQPPPQQPP---PQQPPPHQP---------PPHPQPHQQQQ 98
Query: 235 SFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSP 294
P + P GP A G +P S P P T G P G P+P
Sbjct: 99 P-PPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPT------SGAPPGSGPGPTP 151
Query: 295 GYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGP 350
P G PP P P VP PP GP PP P PGP
Sbjct: 152 TPPPAVTSAPPGAPPPTP-----------PSSGVPTTPPQAGGPPPPPAAVPGPGP 196
Score = 52.8 bits (125), Expect = 5e-07
Identities = 51/158 (32%), Positives = 55/158 (34%), Gaps = 25/158 (15%)
Query: 168 GDAPPPRPP-PPVRPVPQGTPPVVEEQPQP------PLAMPPYPLPYSPSPSLPVGPTAH 220
G APP PP P G PP P P A P P P PS +P P
Sbjct: 122 GSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA 181
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMP--PRP-GYPGTPM 277
G PP P V GP GP GP+G MP P+P G PG
Sbjct: 182 GGPPPPPAAVPG-----PGP-GPKQGPGPGGPKGG---------KMPGGPKPGGGPGLST 226
Query: 278 GASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQP 315
P P RGG P G PY + P P P
Sbjct: 227 PGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGP 264
Score = 46.2 bits (108), Expect = 4e-05
Identities = 37/104 (35%), Positives = 39/104 (37%), Gaps = 17/104 (16%)
Query: 264 RSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYP--QQSPYPATGGKPPYPIQPQLPSFP 321
RS PP G G GPG G + P P P QQ P PP P P P
Sbjct: 32 RSPPPGMGL-NQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQP--P 88
Query: 322 GQPQPSVPLQPPYP------------PGPAPPYGFPPPPGPAWP 353
PQP QPP P PGPAP G PP + P
Sbjct: 89 PHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 13/108 (12%)
Query: 251 GPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPP 310
GP G P+ +PP P P P P + P P P P P +PP
Sbjct: 45 GPMGPGPGQSGPKPPIPPPP--PHQQQQQPPPQQP--PPQQPPPHQPPPHPQPHQQQQPP 100
Query: 311 YPIQ----PQLPSFPGQPQPSVPLQPPY----PPGPAPPYGFPPPPGP 350
P Q P + PG P P V PP PP P G PP GP
Sbjct: 101 PPPQDSSKPVVAQGPG-PAPGVGSAPPASSSAPPATPPTSGAPPGSGP 147
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 76.6 bits (187), Expect = 3e-14
Identities = 69/237 (29%), Positives = 86/237 (36%), Gaps = 48/237 (20%)
Query: 156 VVRKPRASQELAGDAPPPRPP---------PPVRPVPQGTPPVVEEQPQPPLAMPPYPLP 206
VV P+ + A + PPP+ P PP P P PP+ + A PP P+
Sbjct: 337 VVVSPKEENK-AAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGE---AEPPGPVD 392
Query: 207 YSPSPSLPVGPTAHGALPPAPFPVVSQP----------------SFYSGP---------- 240
+ P + + P AH A P P+ +P S+ SG
Sbjct: 393 ATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMK 452
Query: 241 -LGPTYPAAQ--LGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYP 297
GP+Y A GP Y PP P P P P P P+PGYP
Sbjct: 453 TEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIP-----PPTPGYP 507
Query: 298 QQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQP-PYPPGPAPPYGFPPPPGPAWP 353
P PP P P + P P P + L P YPP PP G PP P P P
Sbjct: 508 PPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPP 564
Score = 75.9 bits (185), Expect = 5e-14
Identities = 75/222 (33%), Positives = 90/222 (40%), Gaps = 53/222 (23%)
Query: 158 RKPRASQELAGDAPPPRP-----------PPPVRPVPQGTPPVVEEQPQPPLAMPP--YP 204
RKP + L G+A PP P PPP P P PP + +P PP PP Y
Sbjct: 374 RKPPLAAAL-GEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPP---PPSSYM 429
Query: 205 LPYSPSPSLPVGP-------------TAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLG 251
S + S G ++GALPPA P P ++ P P +
Sbjct: 430 TGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLP-YHPHVYPPNPPPPPVP 488
Query: 252 PRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSP-YPATGGKPP 310
P A S+ P PP PGYP P P Y +P +P P P T PP
Sbjct: 489 PPPA---SFPPPAIPPPTPGYPPPP-----PTY--------NPNFPPPPPRLPPTHAVPP 532
Query: 311 YPIQPQLPSFPGQ-PQPSVPL--QPPYPPGPAPPYGFPPPPG 349
+P P L P P P+VP QPP PP P PP G PP G
Sbjct: 533 HP-PPGLGLPPASYPPPAVPPGGQPPVPP-PIPPPGMPPVGG 572
Score = 60.1 bits (144), Expect = 3e-09
Identities = 94/365 (25%), Positives = 126/365 (34%), Gaps = 91/365 (24%)
Query: 71 YQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEGEVPLE 130
YQ L K ++ + K K++K L ++ E E A+A +L G + +
Sbjct: 161 YQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRL-CK 219
Query: 131 TFLENFSSMRMLSH-----LRRVRVEKLQEVVRK-----PRASQELAGDAP-----PP-- 173
++ ++S M ++ V V+ L+++ + + Q++ P PP
Sbjct: 220 FEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSL 279
Query: 174 RPPPPVRPVPQGTPPVVEEQPQP-------------PLAMP--PYPLPYS---------- 208
+P P V V Q P E QP P P P P P S
Sbjct: 280 QPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVV 339
Query: 209 -----------PSPSLPVGPTAHGALPPAPFPVVSQPSFYSG-----PLGPT----YPAA 248
P P +P T H LPPA P +P + P GP P
Sbjct: 340 SPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKV 399
Query: 249 QLGPRGAAGYSWS----PQRSMPPRP-----GYPGTPMGASGPGY-----------PLRG 288
Q+ P P R PP P G T SG GY P G
Sbjct: 400 QIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYG 459
Query: 289 GRAPSPGYPQQSPYPA---TGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPY--G 343
P+ G P PY PP P+ P SFP P P P YPP P P Y
Sbjct: 460 ALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFP--PPAIPPPTPGYPP-PPPTYNPN 516
Query: 344 FPPPP 348
FPPPP
Sbjct: 517 FPPPP 521
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 171 PPPRPPPPVRPVPQGTPPVVEEQPQPPLA----MPPYPLPYSPSPSLPVGPTAHGALPPA 226
PPP PPPP P PP P PP PP P P+ ++P P LPPA
Sbjct: 484 PPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPA 543
Query: 227 PFPVVSQPSFYSGPLGPTYPAAQLGPRGAAG 257
+P + P P+ P P + P G G
Sbjct: 544 SYPPPAVPPGGQPPVPPPIPPPGMPPVGGLG 574
Score = 34.7 bits (78), Expect = 0.13
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 170 APPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGA 222
A PP PPP + P PP PP PP P P P PVG A
Sbjct: 529 AVPPHPPPGLGLPPASYPP----PAVPPGGQPPVPPPIPPPGMPPVGGLGRAA 577
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 76.3 bits (186), Expect = 4e-14
Identities = 67/207 (32%), Positives = 81/207 (39%), Gaps = 35/207 (16%)
Query: 165 ELAGDAPPP--RPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGA 222
+L DAPPP P P V + G PP P P PP P P + P +P A
Sbjct: 209 QLFADAPPPPSAPNPVVSSLGSGLPP--PGMPPPGSFPPPVPPPGALPPGIPP------A 260
Query: 223 LPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP----RPGYPGTPMG 278
+PP P P G G P+A G G+ S PP PG +
Sbjct: 261 MPPPPMP--------PGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLA 312
Query: 279 ASGP---GYPLRG----GRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFP---GQPQPSV 328
GP G+P G G P P P P+P G PP + P+ P F G P P
Sbjct: 313 HHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP---GPPPMGMPPRGPPFGSPMGHPGPMP 369
Query: 329 PLQPPYPPGPAPPYGFPPPPGPAWPGY 355
P PP PP+G+ PP P GY
Sbjct: 370 PHGMRGPPPLMPPHGYTGPPRPPPYGY 396
Score = 75.9 bits (185), Expect = 5e-14
Identities = 77/214 (35%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYS------PSPSL 213
P S +G PP PPP P P PP P P AMPP P+P PS
Sbjct: 223 PVVSSLGSGLPPPGMPPPGSFPPP--VPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGT 280
Query: 214 P-VGPTAHGALPPAPFPVVSQPS--------FYSGPLGPTYPAAQLGPRGAAGYSWSPQR 264
P G HG P PFP P + GP G +P A GP G+ G
Sbjct: 281 PGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHA--GPPGSGG------- 331
Query: 265 SMPPRPGYPGTPMGASGP-GYPLRGGRAPSP-GYPQQSPYPATGGKPPYPIQPQLPSFPG 322
PPRP PG P P G P RG SP G+P P P G + P P+ P + G
Sbjct: 332 QPPPRPP-PGMPHPGPPPMGMPPRGPPFGSPMGHP--GPMPPHGMRGPPPLMPP-HGYTG 387
Query: 323 QPQPSV------PLQPPYPPGPAPPYGFPPPPGP 350
P+P PL PP P P PP PP GP
Sbjct: 388 PPRPPPYGYQRGPLPPPRPT-PRPPV---PPRGP 417
Score = 67.4 bits (163), Expect = 2e-11
Identities = 62/193 (32%), Positives = 72/193 (37%), Gaps = 44/193 (22%)
Query: 168 GDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLP-VGPTAHGALPPA 226
G PPP PPP +P G PP + P PP A P PS P G HG P
Sbjct: 241 GSFPPPVPPPGA--LPPGIPPAMPPPPMPPGAAGHGP----PSAGTPGAGHPGHGHSHPH 294
Query: 227 PFPVVSQPS--------FYSGPLGPTYPAAQLGPRGAAG-----------YSWSPQRSMP 267
PFP P + GP G +P A GP G+ G + P MP
Sbjct: 295 PFPPGGMPHPGMSQMQLAHHGPHGLGHPHA--GPPGSGGQPPPRPPPGMPHPGPPPMGMP 352
Query: 268 PRPGYPGTPMGASGPGYPLRGGRAPSPGYP---------------QQSPYPATGGKPPYP 312
PR G+PMG GP P G R P P P Q+ P P P P
Sbjct: 353 PRGPPFGSPMGHPGP-MPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPP 411
Query: 313 IQPQLPSFPGQPQ 325
+ P+ P PQ
Sbjct: 412 VPPRGPLRGPLPQ 424
Score = 34.3 bits (77), Expect = 0.17
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
Query: 276 PMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYP 335
P+ + + L P P P G PP + P PG P VP P
Sbjct: 200 PLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPP-----PGSFPPPVP-----P 249
Query: 336 PGPAPPYGFPP--PPGPAWPG 354
PG PP G PP PP P PG
Sbjct: 250 PGALPP-GIPPAMPPPPMPPG 269
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 75.5 bits (184), Expect = 7e-14
Identities = 75/208 (36%), Positives = 82/208 (39%), Gaps = 35/208 (16%)
Query: 168 GDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAP 227
G P P P VP G PP P +P P P PS+P PT PPAP
Sbjct: 36 GSNPWNNPSAP-SSVPSGLPPSAT-----PSTVPFGPAPTGMYPSVP--PTGPPPGPPAP 87
Query: 228 FPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMP--PRP-GYPGTPMGA----- 279
FP S PS P G YPA + G G +P P PRP G P P A
Sbjct: 88 FPP-SGPS--CPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGP 144
Query: 280 -----SGPGYPLRGGRAPSPG--YPQQSPYPAT------GGKPPYPIQPQLPSFPGQPQP 326
SGP P GG+ P+P YP PYPA G PP P P G P P
Sbjct: 145 WGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAP 204
Query: 327 SVPLQPPYP-PG--PAPPYGFPPPPGPA 351
YP PG P P F P GP+
Sbjct: 205 YPAPTGSYPTPGLYPTPSNPFQVPSGPS 232
Score = 74.3 bits (181), Expect = 2e-13
Identities = 68/190 (35%), Positives = 76/190 (40%), Gaps = 35/190 (18%)
Query: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVV 231
PP PPP P P PP P P PYP P P P GPT P PFP +
Sbjct: 76 PPTGPPPGPPAP--FPPSGPSCPPPG---GPYPAPTVPGP----GPTGPYPTPNMPFPEL 126
Query: 232 SQPSFYSGPLGPTYPAAQLGPRGAAGYS-WSPQR-------SMP-PRPG-YPGTPMG-AS 280
+P Y P P A LGP G+ W+P +MP P PG YP P A
Sbjct: 127 PRP--YGAPTDPA-AAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAP 183
Query: 281 GPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAP 340
G P+ G P + +PYPA G P P P PS P Q P P AP
Sbjct: 184 GAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTP--------GLYPTPSNPFQVPSGPSGAP 235
Query: 341 PYGFPPPPGP 350
P P GP
Sbjct: 236 PM----PGGP 241
Score = 42.7 bits (99), Expect = 5e-04
Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 266 MPPRPGYPGTPMGASGPG-YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQP-QLPSFPGQ 323
+PP P G + G YP P PG P +P+P +G P P P P+ PG
Sbjct: 53 LPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPP--APFPPSGPSCPPPGGPYPAPTVPG- 109
Query: 324 PQPSVPLQPPYPPGP--APPYGFPPPPGPAWP 353
P P+ P P P P PYG P P A P
Sbjct: 110 PGPTGPYPTPNMPFPELPRPYGAPTDPAAAGP 141
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 269 RPGYPGTPMGASGP-GYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPS 327
+PG P S P P PS P +P G P + P +P P P
Sbjct: 26 KPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPP 85
Query: 328 VPLQPPYP--PGPAPPYGFPPPPGPAWPG 354
P P P P P PY P PGP G
Sbjct: 86 APFPPSGPSCPPPGGPYPAPTVPGPGPTG 114
Score = 37.0 bits (84), Expect = 0.027
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 171 PPPRPPPPVRPVPQGTPPVVEEQPQPPLAMP--PYPLP-YSPSPSLPVG-PTAHGALPPA 226
PPP+ P PVP GT P P P P YP P P+PS P P+ PP
Sbjct: 178 PPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPM 237
Query: 227 P 227
P
Sbjct: 238 P 238
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 74.7 bits (182), Expect = 1e-13
Identities = 61/193 (31%), Positives = 73/193 (37%), Gaps = 18/193 (9%)
Query: 173 PRPPPPVRPVPQGTP--PVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPV 230
P PP P P+G P P + P PP A PP P +PS PT A PP+P
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
Query: 231 VSQPSFYSGPLGPTY--------PAAQLGPRGAAGYSWSPQRSMPPRP-GYP-GTPMGAS 280
+ PS P P PAA P+GA+ +P + PP P G P TP+
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS----TPPAATPPSPKGSPAATPLPKG 1055
Query: 281 GPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAP 340
P P PSP +P PP P P P P PP P+P
Sbjct: 1056 APTTP--AATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP 1113
Query: 341 PYGFPPPPGPAWP 353
G PP P
Sbjct: 1114 KGGLATPPHKGAP 1126
Score = 70.1 bits (170), Expect = 3e-12
Identities = 65/203 (32%), Positives = 77/203 (37%), Gaps = 24/203 (11%)
Query: 171 PPPR----PPPPVRPVPQG---TPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGAL 223
PPP+ P P P+G TPP + P P A PP P +PS PT A
Sbjct: 1143 PPPKGAPTTPAATPPSPKGGLATPPP-KGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201
Query: 224 PPAPFPVVSQPSFYSGPLGPTY----PAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGA 279
PP+P ++ PS P P P L G +P + P G P TP
Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPK 1261
Query: 280 SGPGYP------LRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFP-GQPQP--SVPL 330
P P L+GG A P +P T PP P S P G P P + P
Sbjct: 1262 GAPTPPAATPPSLKGGLATPPHKGAPNPAVVT---PPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 331 QPPYPPGPAPPYGFPPPPGPAWP 353
P PG PP G P PP P
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPP 1341
Score = 69.3 bits (168), Expect = 5e-12
Identities = 62/195 (31%), Positives = 74/195 (37%), Gaps = 44/195 (22%)
Query: 181 PVPQGTP--PVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYS 238
P P+G P P + P PP A PP P +PS PT A PP+P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP---------KG 975
Query: 239 GPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRP-GYPGTPMGASGPGYPLRGGRAPSP-GY 296
GP P+ P+GA +P + PP P G P TP P P PSP G
Sbjct: 976 GPATPS-------PKGAP----TPPAATPPSPKGGPATPSPKGAPTPP--AVTPPSPKGS 1022
Query: 297 PQQSPYPATGGKPP-------------YPIQPQLPSFPGQPQPSV---PLQPPYPPGPAP 340
P +P+P PP P+ P+ P PS P P P P
Sbjct: 1023 PAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Query: 341 PYGFPPPP--GPAWP 353
P PP P GPA P
Sbjct: 1083 PAATPPSPKGGPATP 1097
Score = 68.9 bits (167), Expect = 6e-12
Identities = 63/200 (31%), Positives = 76/200 (38%), Gaps = 24/200 (12%)
Query: 173 PRPPPPVRPVPQGTP--PVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPA---- 226
P PP P P+G P P + P PP A PP P +PS PT PP+
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS 1022
Query: 227 ----PFPV-VSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG 281
PFP S P + P PAA P+GA +P ++P G P TP
Sbjct: 1023 PAATPFPKGASTPPAATPPSPKGSPAATPLPKGA---PTTPAATLPSPKGGPATPSLKGA 1079
Query: 282 PGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQ----LPSFPGQPQPSVP-LQPPYPP 336
P P PSP +P P PP P L + P + P+ P PP P
Sbjct: 1080 PTPP--AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 337 G---PAPPYGFPPPPGPAWP 353
G PP G P P P
Sbjct: 1138 GGLATPPPKGAPTTPAATPP 1157
Score = 65.5 bits (158), Expect = 7e-11
Identities = 63/199 (31%), Positives = 79/199 (39%), Gaps = 26/199 (13%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTP---PVVEEQPQPPLAMPPYPLPYSPSPSLPVG 216
P A+ G + PP PP P+G+P P+ + P P A P P +PSL
Sbjct: 1023 PAATPFPKGASTPPAATPPS---PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 217 PTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTP 276
PT A PP+P + PS P+ P A P+G + PP G P TP
Sbjct: 1080 PTPPAATPPSPKGGPATPSPKGAPMPPA--ATPPSPKGGL--------ATPPHKGAPTTP 1129
Query: 277 MGASGPGYPLRGGRAP----SPGYPQQSPYPATGG--KPPYPIQPQLPSFPGQPQPSVPL 330
A+ P P G P +P P +P GG PP P P+ P P L
Sbjct: 1130 --AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA-ATPPSPKGGL 1186
Query: 331 QPPYPPG-PAPPYGFPPPP 348
P P G P P PP P
Sbjct: 1187 ATPSPKGAPTTPAATPPSP 1205
Score = 61.2 bits (147), Expect = 1e-09
Identities = 63/200 (31%), Positives = 77/200 (38%), Gaps = 33/200 (16%)
Query: 167 AGDAPPPRPPPP----VRPVPQGTPPVVEEQPQPPLAMPPYPLPY-SPSPSLPVGPTAHG 221
A P PP P P P+G P P P P P P +P+P P+ G
Sbjct: 1217 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276
Query: 222 ALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRP-GYPGTPMGAS 280
L P P+ + P P A P+GA +P + PP P G PGTP
Sbjct: 1277 GLATPPHKGAPNPAVVTPP-SPKGGPATSPPKGAP----TPPAATPPSPKGSPGTP---- 1327
Query: 281 GPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAP 340
P +G AP+P P +P P+ G P P PS G P + P PP P
Sbjct: 1328 ----PPKG--APTP--PAVTP-PSPKGTPTLP--ATTPSSKGGPTTPSSKEGPTPPAATP 1376
Query: 341 -----PYGFPPPP--GPAWP 353
P PP P GPA P
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIP 1396
Score = 59.7 bits (143), Expect = 4e-09
Identities = 63/217 (29%), Positives = 83/217 (38%), Gaps = 38/217 (17%)
Query: 162 ASQELAGDAPPPRPPPPVRPVPQGTP----------------PVVEEQPQPPLAMPPYPL 205
AS A P P+ P P+P+G P P ++ P PP A PP P
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Query: 206 PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGP--TYPAAQLG-----PRGA--- 255
+PS P A PP+P ++ P P P T P+ + G P+GA
Sbjct: 1092 GGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT 1151
Query: 256 -AGYSWSPQRSM--PPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYP 312
A SP+ + PP G P TP A+ P P G PSP +P PP P
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTP--AATPPSPKGGLATPSPKGAPTTP----AATPPSP 1205
Query: 313 IQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPG 349
+ L + + P+ P P P P P P G
Sbjct: 1206 -KGGLATPSPKGAPTTPAATP--PSPKGGLATPSPKG 1239
Score = 59.7 bits (143), Expect = 4e-09
Identities = 58/217 (26%), Positives = 77/217 (35%), Gaps = 39/217 (17%)
Query: 160 PRASQELAGDAPPPRPPP-----PVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLP 214
P S PP PP P P P+G P P P P P + +PS
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP---ATTPSSK 1357
Query: 215 VGPTAHGALPPAPFPVVSQPSFYSGPL--------GPTYPAAQLGPRGAAGYSWSPQRSM 266
GPT + P P + PS GP GP P+ + P A SP+++
Sbjct: 1358 GGPTTPSS-KEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA- 1415
Query: 267 PPRPGYPGTPMGASGPGYPLRGG------------RAPSPGYPQQSP-YPATGGKPPYP- 312
P TP+ G P +G +AP+ P+ P P++ G P P
Sbjct: 1416 ------PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPA 1469
Query: 313 IQPQLPSFPGQP-QPSVPLQPPYPPGPAPPYGFPPPP 348
+ P P P P Q + P P P G P P
Sbjct: 1470 VTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Score = 55.8 bits (133), Expect = 6e-08
Identities = 56/203 (27%), Positives = 74/203 (36%), Gaps = 23/203 (11%)
Query: 158 RKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVG- 216
+ P S G A P P +P TPP +E P P +P+ P+G
Sbjct: 1445 KAPATSAPKGGPATPSSKGDPT--LPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGA 1502
Query: 217 PTAHGALPPAPFPVVSQPSFYSGPLGPTYPA------AQLGPRGAAGYSWSPQRSMPPRP 270
PT +P +P V + PS P+ PT A L P+ A P ++P
Sbjct: 1503 PTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEAL---IPPAMTVPSPK 1559
Query: 271 GYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPL 330
P P P P + P P+T P P + +P P PS P
Sbjct: 1560 KTPAIPTPKEAPATPSSKEASSPPAVT-----PSTYKGAPSPKELLIP--PAVTSPS-PK 1611
Query: 331 QPPYPPGPAPPYGFPPPPGPAWP 353
+ P PP PP P GPA P
Sbjct: 1612 EAPTPPAVTPP---SPEKGPATP 1631
Score = 55.5 bits (132), Expect = 7e-08
Identities = 61/211 (28%), Positives = 72/211 (34%), Gaps = 29/211 (13%)
Query: 158 RKPRASQELAGDAPPPRPPPPVRPVP-----------QGTP--PVVEEQPQPPLAMPPYP 204
R P D P PV PV QG+ P P PP + P
Sbjct: 807 RPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPP-SPKGAP 865
Query: 205 LPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQ- 263
P + +P P G T LPP P S + GP PA + P + S SP+
Sbjct: 866 TPSAVTPLSPKGVT----LPPKETPTPSVVNLPFPKEGPATPAPKQAP-ALSMTSSSPKK 920
Query: 264 -RSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG 322
R+ P G P +P P P PSP +P P PP P P
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPP--AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA 978
Query: 323 QPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P P P PP PP P GPA P
Sbjct: 979 TPSPK---GAPTPPAATPP---SPKGGPATP 1003
Score = 43.1 bits (100), Expect = 4e-04
Identities = 64/240 (26%), Positives = 83/240 (34%), Gaps = 53/240 (22%)
Query: 154 QEVVRKPRASQELAGDAPPPRP---PPPVRPVPQGTPPVVEEQPQPPLAMPPYPL--PYS 208
+E P + AP P+ PP V T P +E P PP PP P P +
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELLIPPAV------TSPSPKEAPTPPAVTPPSPEKGPAT 1630
Query: 209 PSP-----SLPVGPTAHGALPPAPFPVVSQ-----PSFYSG---PLGPT-------YPAA 248
P+P S PV P++ P +P V + P G GPT PA
Sbjct: 1631 PAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAP 1690
Query: 249 QLGPRGAAGYSWSPQ-----RSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYP 303
+ P A PQ + PP P G+ GP + AP+P P Q
Sbjct: 1691 ESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTV----APAPLLPVQKDSS 1746
Query: 304 ATGGKPPYPIQPQLPSFPGQPQPSVPLQP-------PYP------PGPAPPYGFPPPPGP 350
T P+ P P + + S PL P P P+PP P P P
Sbjct: 1747 KTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSP 1806
Score = 35.8 bits (81), Expect = 0.060
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 21/102 (20%)
Query: 154 QEVVRKPRASQELAGDAPP---PRPPPPVRPVP------QGTPPVVEEQPQPPLA----- 199
++V+ KP ++ A +PP P P PV +P +P +V E P PLA
Sbjct: 1779 EKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADED 1838
Query: 200 -----MPPYPLPYS-PSPSLPVG-PTAHGALPPAPFPVVSQP 234
+PP P+ P S+ V PT A P P P QP
Sbjct: 1839 ELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQP 1880
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/174 (27%), Positives = 60/174 (34%), Gaps = 28/174 (16%)
Query: 171 PPPRPPPPVRPVPQGTPPVVEEQPQP-----PLAMPPYPLPYSPSPS---LPVG--PTAH 220
P P PPP P PQ P Q P +A P +P+ S S LP+G P A
Sbjct: 41 PGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAP 100
Query: 221 GALPPAPFPVVSQPSF-YSGPL------GPTYPAAQLGPRGAAGYSWSPQRSMPPR--PG 271
LP P +S + + P+ G +A L A +S + PP
Sbjct: 101 TFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTS 160
Query: 272 YPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATG-GKPPYPIQPQLPSFPGQP 324
P + SG L APS P T K P + P P P
Sbjct: 161 PPSVAVAESGSVITLSAPIAPSE--------PKTNLNKVPSEVVPNPKGTPSPP 206
Score = 33.9 bits (76), Expect = 0.23
Identities = 53/202 (26%), Positives = 75/202 (37%), Gaps = 31/202 (15%)
Query: 160 PRASQEL-AGDAPPPRPPPPVRPVPQGTPPVV---EEQPQPPLAMPPYPLPYSPSPSLPV 215
P+AS+ L A P V P P+ TP + + PQ + P P P PS
Sbjct: 1666 PQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP-PICPDPSAKN 1724
Query: 216 GPTAH-GALPPAPFPVVSQPSFYS-----------GPLGPTYPAAQLGPRGAAGYSWSPQ 263
G + PAP V + S + GPL P A P AA + +
Sbjct: 1725 GSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKAST-PLTAAAF----E 1779
Query: 264 RSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGY---PQQSPYPATGGKPPYPIQPQLPSF 320
+ +P P + ++ P P+ APSP P+Q P++ G P P
Sbjct: 1780 KVLPK----PESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLE--SPSKPLA 1833
Query: 321 PGQPQPSVPLQPPYPPGPAPPY 342
P +PL PP P P+
Sbjct: 1834 PADEDELLPLIPPEPISGGVPF 1855
Score = 33.1 bits (74), Expect = 0.39
Identities = 40/155 (25%), Positives = 52/155 (33%), Gaps = 24/155 (15%)
Query: 198 LAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAG 257
LA +P+ +LP+ PTA P AP P + + L P P +
Sbjct: 683 LAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKS--------- 733
Query: 258 YSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQL 317
P S+PP PGT G AP P++ P +G + L
Sbjct: 734 ---VPSPSLPPAGTPPGT---KKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTL 787
Query: 318 PSFPGQPQP---SVPLQPPYPP------GPAPPYG 343
P P SV Q PP GP P G
Sbjct: 788 TYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIG 822
Score = 32.7 bits (73), Expect = 0.51
Identities = 51/202 (25%), Positives = 69/202 (34%), Gaps = 36/202 (17%)
Query: 171 PPPRPPPPVRPVPQGTP--PVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPF 228
P P+ P + P P+ P P +E PP A+ P +PSP + P A + P
Sbjct: 1556 PSPKKTPAI-PTPKEAPATPSSKEASSPP-AVTPSTYKGAPSPKELLIPPAVTSPSPKEA 1613
Query: 229 PVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGP----GY 284
P + S GP PA + G + + S + P P MGA+ P G
Sbjct: 1614 PTPPAVTPPSPEKGPATPAPK-GTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGL 1672
Query: 285 PLRGGR--------APSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPP 336
P + G AP+P P G Q + S PP P
Sbjct: 1673 PAKKGPTALKEVLVAPAPESTPIITAPTRKGP--------------QTKKSSATSPPICP 1718
Query: 337 GPAPPYGFPPP-----PGPAWP 353
P+ G P P P P
Sbjct: 1719 DPSAKNGSKGPLSTVAPAPLLP 1740
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 74.3 bits (181), Expect = 2e-13
Identities = 72/237 (30%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 157 VRKPRASQELAGDAPPPRPP----PPVRPVP--QGTPPVVEEQPQPPLAMPPYPLPYSPS 210
++ P+A + PP PP PP+ P+ G PP + + P +PP P P S
Sbjct: 778 LQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTA--TVPPVPPPQYFS 835
Query: 211 PSLPVGPTAHGALPPA----PFPVVSQPSFYSGPLG-----------PTYPAAQLGPRGA 255
P++ + P+ LPPA P V P PL T P + P G
Sbjct: 836 PAV-ILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGV 894
Query: 256 AGYS-WSPQRSMPPRPGYPGT-PMGAS-----GPGYPLRGGRA--------PSPGYPQQS 300
A S S +P +P YP P A P + ++ RA P P P Q
Sbjct: 895 AALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQP 954
Query: 301 PYPATGGKPPYPIQPQLPSFPGQ----PQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P PP P+ P P+ P Q PQP +P QP PP PA P P P P P
Sbjct: 955 VLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVR-PEPLQPHLP 1010
Score = 62.0 bits (149), Expect = 8e-10
Identities = 77/280 (27%), Positives = 93/280 (33%), Gaps = 96/280 (34%)
Query: 168 GDAPPP--RPPP-----------------PVRPVPQGTPPVVE--------------EQP 194
G PP +PPP P++PVP PP + + P
Sbjct: 722 GQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMP 781
Query: 195 QPPL--------AMPPYPL--PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYS------ 238
Q PL MPP P+ P +P + P A LP A P V P ++S
Sbjct: 782 QAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILP 841
Query: 239 ---GPLGPTYPAAQL---------------------------------GPRGAAGYS-WS 261
PL P PA L P G A S S
Sbjct: 842 SLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHS 901
Query: 262 PQRSMPPRPGYPGT-PMGA-----SGPGYPLRGGRA--PSPGYPQQSPYPATGGKPPYPI 313
+P +P YP P A P + ++ RA P P P Q P PP P
Sbjct: 902 AVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPT 961
Query: 314 QPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P P P PQP+ P QP PP P P PP PA P
Sbjct: 962 LPPQPVLP--PQPTRPPQPVLPPQPMLPPQPVLPPQPALP 999
Score = 59.3 bits (142), Expect = 5e-09
Identities = 62/196 (31%), Positives = 71/196 (36%), Gaps = 35/196 (17%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMP-PYPLPYSPSPSLPVGPT 218
P + A PPP P P P G P +QP PPLA P P P +P P +P+ P
Sbjct: 700 PDPAMSFAPVLPPPSTPMPTGP---GQPAPPGQQP-PPLAQPTPLPQVLAPQPVVPLQPV 755
Query: 219 AHGALPP--APFPVVSQPSFYSG---PLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYP 273
LPP AP V P+ P P P AQ+ P+ MPP P P
Sbjct: 756 P-PHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQ------------MPPIPVVP 802
Query: 274 GTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPP 333
P PL G G P P T PP P P + PL P
Sbjct: 803 --------PITPLAG----IDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPA 850
Query: 334 YPPGPAPPYGFPPPPG 349
P P P PPG
Sbjct: 851 SPALPLQAVKLPHPPG 866
Score = 52.4 bits (124), Expect = 6e-07
Identities = 64/220 (29%), Positives = 78/220 (35%), Gaps = 36/220 (16%)
Query: 166 LAGDAPPPR-----PPPPVRPV-PQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTA 219
LA AP P PP PV PQ P + Q P A P P+ P+P+ P
Sbjct: 640 LADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQ--PTAAPGLPVGSVPAPACPPSLQQ 697
Query: 220 HGALPPAPFPVVSQPSFYSGPLGPTYPAAQ-LGPRGAAGYSWSPQRSMPPRPGYPGTPMG 278
H P F V P P GP PA P A + PQ + P+P P P+
Sbjct: 698 HFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQ-VLAPQPVVPLQPVP 756
Query: 279 ASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQ-----PP 333
P Y + +P + P +P + PQ+P P P P PL PP
Sbjct: 757 PHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVVP-PITPLAGIDGLPP 815
Query: 334 ---------YPPGPAPPYGFP-----------PPPGPAWP 353
PP P P Y P PP PA P
Sbjct: 816 ALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALP 855
Score = 52.0 bits (123), Expect = 8e-07
Identities = 64/207 (30%), Positives = 78/207 (37%), Gaps = 33/207 (15%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTA 219
P A ++A PP P V+ + + TPP PQP L PP P+ P P+LP P
Sbjct: 913 PAAFPQMAPTDVPPSPHHTVQNM-RATPPQPALPPQPTL--PPQPV-LPPQPTLPPQPV- 967
Query: 220 HGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGA 279
LPP P QP P+ P P L P+ A P R P +P P A
Sbjct: 968 ---LPPQPTRP-PQPVLPPQPMLPPQPV--LPPQPAL-----PVRPEPLQPHLPEQAAPA 1016
Query: 280 SGPGYPLRGGRAPSP-------GYPQQSPYPATGGKPPYP---------IQPQLPSFPGQ 323
+ PG + G P+P P PA PP P + PQ PS
Sbjct: 1017 ATPGSQILLGH-PAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLAT 1075
Query: 324 PQPSVPLQPPYPPGPAPPYGFPPPPGP 350
SV P PP P P GP
Sbjct: 1076 VSASVQSVPTQTATLLPPANPPLPGGP 1102
Score = 47.0 bits (110), Expect = 3e-05
Identities = 61/217 (28%), Positives = 80/217 (36%), Gaps = 35/217 (16%)
Query: 159 KPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPT 218
+P+ Q++ PP P++ Q T QP PP P + P+LP T
Sbjct: 551 QPKEQQDVGSPDKARGPPVPLQV--QVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTSAT 608
Query: 219 AHGALPPAPFPVVSQPSFYSGPLGPTYPAAQ-------LGPRGAAGYSWSPQRSMPPRPG 271
+ + S +F SG Y +Q LG A S + PP
Sbjct: 609 S----------LASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSE 658
Query: 272 YPGTP-----MGA-----SGPGYPLRGGRAPS--PGYPQQSPYPATGGKP--PYPIQPQL 317
P P +GA + PG P+ AP+ P Q P PA P P P P +
Sbjct: 659 GPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTP-M 717
Query: 318 PSFPGQPQPSVPLQPPY-PPGPAPPYGFPPPPGPAWP 353
P+ PGQP P PP P P P P P P P
Sbjct: 718 PTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQP 754
Score = 45.8 bits (107), Expect = 6e-05
Identities = 54/187 (28%), Positives = 65/187 (34%), Gaps = 22/187 (11%)
Query: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVV 231
PP+P P +PV PP PQP L PP P+ P P LP P ALP P P+
Sbjct: 957 PPQPTLPPQPV---LPPQPTRPPQPVL--PPQPM-LPPQPVLPPQP----ALPVRPEPL- 1005
Query: 232 SQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRA 291
QP P +Q+ A Y+ +P P P + P L
Sbjct: 1006 -QPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLPAAPE 1064
Query: 292 PSPGYPQ---------QSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPY 342
P +P QS T P P P LP PG P +Q P
Sbjct: 1065 LLPQFPSSLATVSASVQSVPTQTATLLP-PANPPLPGGPGIASPCPTVQLTVEPVQEEQA 1123
Query: 343 GFPPPPG 349
PPG
Sbjct: 1124 SQDKPPG 1130
Score = 44.7 bits (104), Expect = 1e-04
Identities = 60/199 (30%), Positives = 71/199 (35%), Gaps = 33/199 (16%)
Query: 162 ASQELAGDAPPPRPP-PPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAH 220
ASQ+L A P PP P P+ +PPV PQ A +P S G +
Sbjct: 1363 ASQQLLSQAGPSNPPGAPPAPLAPSSPPVTA-LPQDGAAPATSTMPEPAS-----GTASQ 1416
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGAS 280
P P + S+ S PL T+ A G + P P T AS
Sbjct: 1417 AGGPGTPQGLTSELET-SQPLAETHEAPLAVQPLVVGLA-----PCTPAPEAAST-RDAS 1469
Query: 281 GPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQP-----------QLPSFPGQPQPSVP 329
P PL AP P +P PA G P P+ P QLPS P P
Sbjct: 1470 APREPLPPP-APEPSPHSGTPQPALG--QPAPLLPAAVGAVSLATSQLPS-----PPLGP 1521
Query: 330 LQPPYPPGPAPPYGFPPPP 348
PP PP G PPP
Sbjct: 1522 TVPPQPPSALESDGEGPPP 1540
Score = 42.0 bits (97), Expect = 8e-04
Identities = 53/201 (26%), Positives = 72/201 (35%), Gaps = 31/201 (15%)
Query: 167 AGDAPPPRPPPPVRPVP----QGTPPVVEE--QPQPPLAMPPYPLPYSPSPSLPVGPTAH 220
A +AP PP P+ +P Q + P ++ + P + L PS P G
Sbjct: 1323 APEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNPPGAPPA 1382
Query: 221 GALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQ------RSMPPRPGYPG 274
P +P PV + P + P T P G AG +PQ + P
Sbjct: 1383 PLAPSSP-PVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHE 1441
Query: 275 TPMGASGPGYPLRGGRAPSPGYPQQ-SPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPP 333
P+ PL G AP P+ S A+ + P P P P+PS P
Sbjct: 1442 APLAVQ----PLVVGLAPCTPAPEAASTRDASAPREPLP--------PPAPEPS-----P 1484
Query: 334 YPPGPAPPYGFPPPPGPAWPG 354
+ P P G P P PA G
Sbjct: 1485 HSGTPQPALGQPAPLLPAAVG 1505
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 160 PRASQELAGDAP-PPRPPPPVRPVPQ-GTPPVVEEQPQP--PLAMPPYPLPYSPSPSLPV 215
P A+ AP P PPP P P GTP QP P P A+ L S PS P+
Sbjct: 1460 PEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPL 1519
Query: 216 GPTAHGALPPAP 227
GPT +PP P
Sbjct: 1520 GPT----VPPQP 1527
Score = 32.0 bits (71), Expect = 0.87
Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 20/119 (16%)
Query: 145 LRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVRP----VPQGTPPVVEEQPQPPLAM 200
LRR VE QE +P + A +AP P+PP P++ + + + E P A
Sbjct: 42 LRRSVVESDQE---EPPGLE--AAEAPGPQPPQPLQRRVLLLCKTRRLIAERARGRPAAP 96
Query: 201 PPYPL---PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAA 256
P L P +P GP G P P P+ + T PA GPR A
Sbjct: 97 APAALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAAVE--------TAPAPDGGPREEA 147
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 73.9 bits (180), Expect = 2e-13
Identities = 65/208 (31%), Positives = 74/208 (35%), Gaps = 20/208 (9%)
Query: 149 RVEKLQEVVRKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYS 208
R+ + E + A L A P P P P+ TPP E P +P+P
Sbjct: 133 RLSDMSERLTTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQ 192
Query: 209 PSPSLPVGPTAHGALP-PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMP 267
P+ P GP P PA P +G GP P LGP G R +P
Sbjct: 193 RRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPG--------PRGLP 244
Query: 268 PRPGYPGTPMGASGPGYPLRGGRAPSPGYPQ------QSPYPATGGKPPYPIQPQLPSFP 321
G PG P G GP G PSP PQ Q P G
Sbjct: 245 GEMGRPGPP-GPPGPA----GNPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA 299
Query: 322 GQPQPSVPLQPPYPPGPAPPYGFPPPPG 349
G P P P PP PPGP P G P PG
Sbjct: 300 GVPGPRGPPGPPGPPGPRGPPGPPGTPG 327
Score = 30.4 bits (67), Expect = 2.5
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 291 APSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYP-----PGPAPPYGFP 345
A P P PA PP + LP ++PL P P GPA P G
Sbjct: 154 AERPSSPDND-LPAPESTPPTWNEDFLPD-------AIPLAHPVPRQRRPTGPAGPPGQT 205
Query: 346 PPPGPAWP 353
PPGPA P
Sbjct: 206 GPPGPAGP 213
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 73.6 bits (179), Expect = 3e-13
Identities = 59/195 (30%), Positives = 78/195 (40%), Gaps = 23/195 (11%)
Query: 172 PPRPPPPVRPVPQG-TPPVVEEQPQP---PLAMPPYPLPYSPSPSLPVGPTAHGALPPAP 227
P PPP++ T P +E P P PL PP PL P P P++ PP
Sbjct: 539 PSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPP----PETPSSIATPPPQA 594
Query: 228 FPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPG-TPMGASGPGYP- 285
P ++ P P P P A P+ + P ++ P P P +P+ P P
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPN 654
Query: 286 ------LRGGRAPSPGYPQQSPY--PAT-----GGKPPYPIQPQLPSFPGQPQPSVPLQP 332
L+ +P P P Q+P+ PA+ PP P L + P Q PS P P
Sbjct: 655 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 714
Query: 333 PYPPGPAPPYGFPPP 347
P P PP PPP
Sbjct: 715 PMSPSATPPPQAPPP 729
Score = 72.4 bits (176), Expect = 6e-13
Identities = 63/190 (33%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 170 APPPRPPPPVRPV-----PQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALP 224
A PP PP P P TPP Q PPLA PP +P SP S P+ P+A P
Sbjct: 700 AAPPLQVPPSPPASPPMSPSATPP---PQAPPPLAAPPLQVPPSPPASPPMSPSA--TPP 754
Query: 225 PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPR-PGYPGTPMGASGPG 283
P P+++ P PL Q+ P A SP PP+ P TP
Sbjct: 755 PRVPPLLAAP-----PL-------QVPPSPPASLPMSPLAKPPPQAPPALATP------- 795
Query: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPI---QPQLPSFPGQPQPSVPLQPPYPPGPAP 340
PL+ +P +P Q+P+ + P P+ PQ P P VP PP P
Sbjct: 796 -PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 854
Query: 341 PYGFPPPPGP 350
P PP PGP
Sbjct: 855 PRR-PPTPGP 863
Score = 67.0 bits (162), Expect = 2e-11
Identities = 61/197 (30%), Positives = 70/197 (35%), Gaps = 31/197 (15%)
Query: 171 PPPRPPPPVRPVP-QGTP-----PVVEEQPQPP--LAMPPYPLPYSPSPSLPVGPTAHGA 222
PPP+ PP + P QG P P+ PQ P LA+PP P SP S P+ P A
Sbjct: 590 PPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLA--- 646
Query: 223 LPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGP 282
P P P P P +SP S P P TP + P
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPP-------PSPPVQAPFSPPASPPVSPS--ATPPSQAPP 697
Query: 283 GYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPY 342
L P P SP + PP P L + P Q PS P PP P PP
Sbjct: 698 S--LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP 755
Query: 343 GFPP---------PPGP 350
PP PP P
Sbjct: 756 RVPPLLAAPPLQVPPSP 772
Score = 66.6 bits (161), Expect = 3e-11
Identities = 66/213 (30%), Positives = 77/213 (36%), Gaps = 22/213 (10%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSP--SPSLPVGP 217
P+A LA P PP+ P+ P PPL PP P P SP SP P
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSP-PASPPLSPLATPSP 650
Query: 218 TAHGAL---------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP 268
A AL P P P V P +S P P + P A +P +PP
Sbjct: 651 QAPNALAVHLLQAPFSPPPSPPVQAP--FSPPASPPVSPSATPPSQAPPSLAAPPLQVPP 708
Query: 269 RP--GYPGTPMGASGPGY--PLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQP 324
P P +P P PL P P SP + PP + P L + P Q
Sbjct: 709 SPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQV 768
Query: 325 QPSVPLQPPYPPGPAPPYGFPP----PPGPAWP 353
PS P P P PP PP PP A P
Sbjct: 769 PPSPPASLPMSPLAKPPPQAPPALATPPLQALP 801
Score = 58.2 bits (139), Expect = 1e-08
Identities = 68/261 (26%), Positives = 85/261 (32%), Gaps = 68/261 (26%)
Query: 155 EVVRKPRASQELAGDA-PPPRPPP----------PVRPV-----PQGTPPVVEEQPQPPL 198
+V P AS ++ A PPP+ PP P P P TPP + P L
Sbjct: 705 QVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPP---PRVPPLL 761
Query: 199 AMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGY 258
A PP +P SP SLP+ P A PP P ++ P + P P Q +A
Sbjct: 762 AAPPLQVPPSPPASLPMSPLAKP--PPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 819
Query: 259 SWSPQRSMPP---------------------------RPGYPGTPMGASGPGYPLRGGRA 291
SP + PP RP PG SGP L
Sbjct: 820 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879
Query: 292 PSPGYPQQSPYPATGG-------KPPYPIQPQLPSFPGQPQPSVPLQPP----------- 333
P P P +SP G +L + P+ PP
Sbjct: 880 PPPP-PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPA 938
Query: 334 -YPPGPAPPYGFPPPPGPAWP 353
+ GPAPP F PG P
Sbjct: 939 AWSRGPAPPLAFRGAPGAPLP 959
Score = 50.4 bits (119), Expect = 2e-06
Identities = 63/219 (28%), Positives = 79/219 (36%), Gaps = 39/219 (17%)
Query: 161 RASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAH 220
R S+ + PRP P RP P E P+ ++ PSP+ P+A
Sbjct: 178 RRSRAAGTEVGLPRPAPSARPRPP------TEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 221 GALP------------PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP 268
G L P P S PS P P +P+ Q P+G PQ + P
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS-QPKPKGLQALR-PPQVTPPR 289
Query: 269 RPGYPGT-PMGASGPGYPLRGGRAPSPGYPQQS---PYPAT--GGKP---PYPIQPQLPS 319
+ P P+ +S P G P P + P PAT P P P+ P PS
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPS 349
Query: 320 FPGQPQ--PSVPLQPPY--------PPGPAPPYGFPPPP 348
P Q PS P PP PP APP PP
Sbjct: 350 APPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPP 388
Score = 47.4 bits (111), Expect = 2e-05
Identities = 51/200 (25%), Positives = 71/200 (35%), Gaps = 16/200 (8%)
Query: 155 EVVRKPRASQELAGDAP---PPRPPPPVRPVPQGT-----PPVVEEQPQPPLAMPPYPLP 206
+ +R P+ + AP P P P P GT PP P +PP P
Sbjct: 278 QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPL 337
Query: 207 YSPSPSLPVGPTAHGAL-----PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWS 261
+P P P P+A +L PPA P + PS + P+ + P S
Sbjct: 338 ATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS 397
Query: 262 PQRSMPPRPGYPGTPMGASGPGYP-LRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSF 320
P PP P + + G P L+ + P+Q+ T P P P
Sbjct: 398 PSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSP-- 455
Query: 321 PGQPQPSVPLQPPYPPGPAP 340
P Q S+P PP +P
Sbjct: 456 PLQAPLSLPASPPLQTSLSP 475
Score = 46.2 bits (108), Expect = 4e-05
Identities = 51/206 (24%), Positives = 65/206 (31%), Gaps = 16/206 (7%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLA---MPPYPLPYSPSPSLPVG 216
P L+ P P + P+ Q + PQ PL+ MPP S +P
Sbjct: 467 PPLQTSLSPAVSPLSSPLTIHPL-QALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQT 525
Query: 217 PTAHGALPPAP-FPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGT 275
P A PP P ++ P + T P + P A +P + P +
Sbjct: 526 PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPS 585
Query: 276 PMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQP--SVPLQPP 333
+ P P P G P P P P LP P P S PL P
Sbjct: 586 SIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPL 645
Query: 334 YPPGPAPPYG---------FPPPPGP 350
P P P F PPP P
Sbjct: 646 ATPSPQAPNALAVHLLQAPFSPPPSP 671
Score = 42.0 bits (97), Expect = 8e-04
Identities = 59/243 (24%), Positives = 78/243 (32%), Gaps = 65/243 (26%)
Query: 170 APPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFP 229
+PP P P+ P PP ++ P PP P P +P + P+ +PP P
Sbjct: 334 SPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ-TIPPIQVP 392
Query: 230 -VVSQPSFYSGP------------------LGPTYPAAQLGPRGAAGYSWSPQRSMPPRP 270
++ PS + P L T+ + PR SP R P
Sbjct: 393 HSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPP 452
Query: 271 GYPGTPMGASGPGY-PLRGGRAP-----------------------SPGYP--------- 297
P S P PL+ +P SP P
Sbjct: 453 DSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL 512
Query: 298 --QQSPYPATGGKPPYPI-QPQLPSFPGQPQP-----SVPLQPPY---PPGPAP-PYGFP 345
Q S P + PP + P L + P P S PL P+ PP PAP P P
Sbjct: 513 ETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAP 572
Query: 346 PPP 348
P P
Sbjct: 573 PSP 575
Score = 35.8 bits (81), Expect = 0.060
Identities = 41/122 (33%), Positives = 48/122 (39%), Gaps = 19/122 (15%)
Query: 197 PLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAA 256
P + P P P SP P PV P A L A G +G A + G G A
Sbjct: 22 PGLLTPRP-PGSPRPPPPVTPAALRVLGAA------------GAVGRKPLAERAGGIGGA 68
Query: 257 GYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAP-----SPGYPQQSPYPATGGKPPY 311
S R+ P R + AS P RG RAP SPG P SP A+G P
Sbjct: 69 TIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPG-PVSSPGRASGTTRPG 127
Query: 312 PI 313
P+
Sbjct: 128 PL 129
Score = 29.6 bits (65), Expect = 4.3
Identities = 63/248 (25%), Positives = 81/248 (32%), Gaps = 69/248 (27%)
Query: 171 PP--PRPPPPVRPV---------PQGTPPVVEE---------QPQPPLAMPPYPL----- 205
PP PRPPPPV P G P+ E P A P
Sbjct: 29 PPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSR 88
Query: 206 -PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLG------------- 251
P S P+ G A A +P P VS P SG P P Q G
Sbjct: 89 NPASRPPASGRGERAPPAKNTSPGP-VSSPGRASGTTRPG-PLGQKGLRISAEETVARGK 146
Query: 252 ----PRGAAGYSWSPQRSMPPRPGYP-----------GTPMGASGPGYPLRGGRAPSPGY 296
P+ +A + + + + P PG P GT +G P P R P+ G
Sbjct: 147 ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPA-PSARPRPPTEG- 204
Query: 297 PQQS-----------PYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFP 345
P++S P PA +P Q P+ + PL P GP+
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 346 PPPGPAWP 353
P P+ P
Sbjct: 265 APAHPSQP 272
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 72.8 bits (177), Expect = 4e-13
Identities = 70/237 (29%), Positives = 90/237 (37%), Gaps = 51/237 (21%)
Query: 162 ASQELAGDAPPPRPPPPVRPVPQGTP--PVVEEQPQP--------PLAMPPY-------- 203
AS+ L+ A P P P +GTP P QP+P P PP
Sbjct: 229 ASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG 288
Query: 204 PLPYSP----SPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--------------PTY 245
PL SP SPS P P+A +L P P + PS + LG P
Sbjct: 289 PLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 348
Query: 246 PAAQLGPRGAAGYSWSPQRSMPPRPGYPG-TPMGASGPGYP-------LRGGRAPSPGYP 297
P A P+ + P ++ P P P +P+ P P L+ +P P P
Sbjct: 349 PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 408
Query: 298 QQSPY--PAT-----GGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPP 347
Q+P+ PA+ PP P L + P Q PS P PP P PP PPP
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 465
Score = 68.9 bits (167), Expect = 6e-12
Identities = 65/231 (28%), Positives = 83/231 (35%), Gaps = 52/231 (22%)
Query: 155 EVVRKPRASQELAGDAPPP-RPPPPV--------RPVPQGTP----PVVEEQPQPPLAMP 201
+V P AS ++ A PP + PPP+ +P PQ P P ++ P PP + P
Sbjct: 441 QVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP 500
Query: 202 PYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWS 261
P+SPS SLP+ P A PP PV++ P P P P Q
Sbjct: 501 G-QAPFSPSASLPMSPLA--TPPPQAPPVLAAPLLQVPPSPPASPTLQ------------ 545
Query: 262 PQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGG-------KPPYPIQ 314
P RP PG SGP L P P P +SP G
Sbjct: 546 ----APRRPPTPGPDTSVSGPRLTLALAPGPPPP-PSRSPSSTLSGPDLAGHSSSATSTP 600
Query: 315 PQLPSFPGQPQPSVPLQPP------------YPPGPAPPYGFPPPPGPAWP 353
+L + P+ PP + GPAPP F PG P
Sbjct: 601 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Score = 60.8 bits (146), Expect = 2e-09
Identities = 60/190 (31%), Positives = 74/190 (38%), Gaps = 34/190 (17%)
Query: 170 APPPRPP------PPVRPV--PQGTPPVVEEQPQPPLAMPPYPLPYSPSP--SLPVGPTA 219
+PPP PP PP P P TPP Q P LA PP +P PSP S P+ P+A
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPP---SQAPPSLAAPPLQVP--PSPPASPPMSPSA 456
Query: 220 HGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMP-PRPGYPGTPMG 278
P AP P+ + P + P P P A P P +++P P +PG
Sbjct: 457 TPP-PQAPPPLAAPPLQLAKP-PPQAPPALATP---------PLQALPSPPASFPGQAPF 505
Query: 279 ASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQP--QLPSFPGQPQPSVPLQPP--- 333
+ P+ P P P P P P P Q P P P P + P
Sbjct: 506 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLT 565
Query: 334 --YPPGPAPP 341
PGP PP
Sbjct: 566 LALAPGPPPP 575
Score = 48.9 bits (115), Expect = 7e-06
Identities = 61/216 (28%), Positives = 77/216 (35%), Gaps = 38/216 (17%)
Query: 161 RASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAH 220
R S+ + PRP P RP P E P+ ++ PSP+ P+A
Sbjct: 169 RRSRAAGTEVGLPRPAPSARPRPP------TEGPRKSVSSASEHSTTEPSPAARRRPSAG 222
Query: 221 GAL------------PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP 268
G L P P S PS P P +P +Q P+G PQ + P
Sbjct: 223 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHP-SQPKPKGLQALR-PPQVTPPR 280
Query: 269 RPGYPGT-PMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQ-- 325
+ P P+ +S PL +P P P T PP Q + G P
Sbjct: 281 KDAAPALGPLSSS----PLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Query: 326 ------PSVPLQP-PYPPGPAPP-YGFPP---PPGP 350
PS PL P PP APP PP PP P
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP 372
Score = 32.3 bits (72), Expect = 0.66
Identities = 62/239 (25%), Positives = 80/239 (33%), Gaps = 60/239 (25%)
Query: 171 PP--PRPPPPVRPV---------PQGTPPVVEE------QPQPPLAMPPYPLPYSPSPSL 213
PP PRPPPPV P G P+ E P A P S P+
Sbjct: 29 PPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPAS 88
Query: 214 PVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLG-----------------PRGAA 256
G A A +P P VS P SG P P Q G P+ +A
Sbjct: 89 GRGERAPPAKNTSPGP-VSSPGRASGTTRPG-PLGQKGLRISAEETVARGKATEAPKRSA 146
Query: 257 GYSWSPQRSMPPRPGYP-----------GTPMGASGPGYPLRGGRAPSPGYPQQS----- 300
+ + + + P PG P GT +G P P R P+ G P++S
Sbjct: 147 LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPA-PSARPRPPTEG-PRKSVSSAS 204
Query: 301 ------PYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P PA +P Q P+ + PL P GP+ P P+ P
Sbjct: 205 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP 263
Score = 30.4 bits (67), Expect = 2.5
Identities = 42/156 (26%), Positives = 52/156 (33%), Gaps = 39/156 (25%)
Query: 158 RKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGP 217
++ +A A P R P + P P G SP P PV P
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLTPRPPG----------------------SPRPPPPVTP 41
Query: 218 TAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPM 277
A L A G +G A + G G A S R+ P R P
Sbjct: 42 AALRVLGAA------------GAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRP---- 85
Query: 278 GASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPI 313
ASG G + SPG P SP A+G P P+
Sbjct: 86 PASGRGERAPPAKNTSPG-PVSSPGRASGTTRPGPL 120
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 72.8 bits (177), Expect = 4e-13
Identities = 61/207 (29%), Positives = 77/207 (37%), Gaps = 48/207 (23%)
Query: 178 PVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSP-------SLPVGPTAH------GALP 224
P++ P G PP + P PP+ P+P + P S PVG + G +P
Sbjct: 412 PMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMP 471
Query: 225 PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGP-- 282
P P ++ P P P+ L P W Q+ PP P P + M +S P
Sbjct: 472 PPPMGMMPPPPPPPSGQPPPPPSGPLPP-------WQQQQQQPPPPPPPSSSMASSTPLP 524
Query: 283 -------------------GYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQ 323
+ A SPG PQ P PP +QP LP PG
Sbjct: 525 WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP-GVQPPLP--PGA 581
Query: 324 PQPSVPLQPPYPPGPAPPYGFPPPPGP 350
P P PP PPG A PPPP P
Sbjct: 582 PPP----PPPPPPGSAGMMYAPPPPPP 604
Score = 57.0 bits (136), Expect = 3e-08
Identities = 59/193 (30%), Positives = 71/193 (36%), Gaps = 43/193 (22%)
Query: 168 GDAPPPRPPPPVRPVPQGT---PPVVEEQPQPPLAMPP-------YPLPYSPSPSLPVGP 217
G PPP PPP +P P + PP ++Q QPP PP PLP+ + +
Sbjct: 476 GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS 535
Query: 218 TAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPG-YPGTP 276
G++PP Q + P P Q P +P PG P P
Sbjct: 536 AGTGSIPP------WQQQQAAAAASPGAPQMQGNP-----------TMVPLPPGVQPPLP 578
Query: 277 MGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPS-FPGQPQPSVPLQPPYP 335
GA P P P PG P PP P P PS F V PP+
Sbjct: 579 PGAPPPPPP------PPPGSAGMMYAP-----PPPPPPPMDPSNFVTMMGMGVAGMPPFG 627
Query: 336 PGPAPPYGFPPPP 348
PAPP PPPP
Sbjct: 628 MPPAPP---PPPP 637
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/202 (29%), Positives = 70/202 (34%), Gaps = 55/202 (27%)
Query: 170 APPPRPPPP-VRPVPQGTPPVVEEQP---QPPLAMP----------PYPLPYSPSPSLPV 215
AP PPPP + Q PP + P +P M P+ P+ P PSL
Sbjct: 348 APANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPH-PLPSLTG 406
Query: 216 GPTAHGAL-----PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRP 270
G H PP P+ P GP +P GP PP
Sbjct: 407 GHGGHPMQHNPNGPPPPWMQPPPPPMNQGP----HPPGHHGP--------------PPMD 448
Query: 271 GYPG-TPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVP 329
Y G TP+G+ Y L G+ P P G PP P P GQP P P
Sbjct: 449 QYLGSTPVGSGV--YRLHQGKG-------MMPPPPMGMMPPPPPPPS-----GQPPP--P 492
Query: 330 LQPPYPPGPAPPYGFPPPPGPA 351
P PP PPPP P+
Sbjct: 493 PSGPLPPWQQQQQQPPPPPPPS 514
Score = 37.7 bits (86), Expect = 0.016
Identities = 37/118 (31%), Positives = 42/118 (35%), Gaps = 29/118 (24%)
Query: 160 PRASQELAGDAPPPRPP----PPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPV 215
P Q+ A A P P P + P+P G P P PP A PP P P P
Sbjct: 543 PWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQP-----PLPPGAPPPPPPP-------PP 590
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYP 273
G PP P P PS + +G G AG P MPP P P
Sbjct: 591 GSAGMMYAPPPPPPPPMDPSNFVTMMG----------MGVAG---MPPFGMPPAPPPP 635
Score = 31.2 bits (69), Expect = 1.5
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 39/119 (32%)
Query: 273 PGTPMGASGPGY-PLRGGRAPSPGYPQQSPYP-----ATGGKPPY----PIQPQL----- 317
P + SGP PL AP P P +P P T +PP+ P + +
Sbjct: 326 PASVGSTSGPATTPLAS--APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMH 383
Query: 318 ---PSFPG-------QPQPSV-------PLQPPYPPGPAPPYGFPPPP----GPAWPGY 355
P PG P PS+ P+Q P GP PP+ PPPP GP PG+
Sbjct: 384 GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQ-HNPNGPPPPWMQPPPPPMNQGPHPPGH 441
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 72.8 bits (177), Expect = 4e-13
Identities = 56/158 (35%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 191 EEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQL 250
++Q QPP A+PP P P+ + GP A L AP VV P+ P G P+ Q+
Sbjct: 987 QQQQQPPPALPPGSQPIPPTGA--AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQI 1044
Query: 251 GPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPP 310
G AG + PQ+ P P GA PG P G PSP QQ+P G P
Sbjct: 1045 G---QAGSTAGPQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
Query: 311 YPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
PG P PL PP P P+P P PP
Sbjct: 1098 G------SGHPGVADPGTPL-PPDPTAPSPGTVTPVPP 1128
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMP------PYPLPYSPSPSL 213
P+ Q P PP P P G P +Q PP MP +P P L
Sbjct: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ-TPPSMMPGAVPGSGHPGVADPGTPL 1111
Query: 214 PVGPTA--HGALPPAPFP 229
P PTA G + P P P
Sbjct: 1112 PPDPTAPSPGTVTPVPPP 1129
Score = 30.8 bits (68), Expect = 1.9
Identities = 39/137 (28%), Positives = 48/137 (35%), Gaps = 36/137 (26%)
Query: 167 AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPA 226
AG PP P + Q +Q QP A P +P P +P P HG P+
Sbjct: 1029 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP----PGVP-PPGPHG---PS 1080
Query: 227 PFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPL 286
PFP P P+ G +G+ P PGTP+ P P
Sbjct: 1081 PFPNQQTP-----------PSMMPGAVPGSGH---------PGVADPGTPL----PPDP- 1115
Query: 287 RGGRAPSPGYPQQSPYP 303
APSPG P P
Sbjct: 1116 ---TAPSPGTVTPVPPP 1129
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 72.4 bits (176), Expect = 6e-13
Identities = 55/174 (31%), Positives = 65/174 (37%), Gaps = 22/174 (12%)
Query: 156 VVRKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQ--PPLAMPPYPLPYSPS--- 210
+ P+ G+ P PPPP +P QG PP +PQ PP P P P
Sbjct: 32 IAGNPQGPSPQGGNKPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRS 89
Query: 211 ----PSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSM 266
P P GP G P P P + P GP P GP G RS
Sbjct: 90 PRSPPGKPQGPPPQGGKPQGP-----PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP 144
Query: 267 PPRPGYPGTPMGASGPGYPLRGG------RAPSPGYPQQSPYPATGGKPPYPIQ 314
P +P P G + G P G +AP G PQ P P GG+P P Q
Sbjct: 145 PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 198
Score = 61.2 bits (147), Expect = 1e-09
Identities = 64/206 (31%), Positives = 74/206 (35%), Gaps = 42/206 (20%)
Query: 162 ASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHG 221
++Q L D P + PQG P +PQ P P P P GP G
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGP----------PPPPGKPQGPPPQG 64
Query: 222 ALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASG 281
+ P GP P GP S SP RS P +P P P G
Sbjct: 65 G---------------NKPQGPPPPGKPQGPPPQGDKSRSP-RSPPGKPQGP-PPQGGKP 107
Query: 282 PGYPLRGGRAPS----PGYPQQSPYPATGGKPPYPIQ--PQLPSFPGQPQPSVPLQPPYP 335
G P +GG P PG PQ P A GG + P P P Q + + P PP P
Sbjct: 108 QGPPPQGGNKPQGPPPPGKPQGPP--AQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP 165
Query: 336 PG------PAPPYGFPP-PPGPAWPG 354
G APP G P PP P G
Sbjct: 166 AGGNPQQPQAPPAGQPQGPPRPPQGG 191
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 71.6 bits (174), Expect = 1e-12
Identities = 68/225 (30%), Positives = 82/225 (36%), Gaps = 65/225 (28%)
Query: 171 PPPRPPPPVRPVPQGTPPVVEEQP-QPPLAMPPYPL------------PYSPSPSLPVGP 217
PPP PPPP P+P PP+ P + PL PP PL P +P P P P
Sbjct: 175 PPPTPPPPPPPLP---PPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPP 231
Query: 218 TAHGALPPAP---------------FPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSP 262
LPPA P + P P G YP + P A + P
Sbjct: 232 PTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCG--YPGLKAEPASPAQDAQEP 289
Query: 263 QRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG 322
PP P Y AS P PL G + S + P P+ P+ PSF
Sbjct: 290 PAPPPPLPPYASCSPRASLPAPPLPGVNSSS--------------ETPPPLPPKSPSFQA 335
Query: 323 QPQ----PSVPLQPPYPPGPAP-----PYGFP--------PPPGP 350
PQ ++P PP PPG P +G P PPP P
Sbjct: 336 PPQKAGAQALP-APPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAP 379
Score = 63.2 bits (152), Expect = 4e-10
Identities = 64/204 (31%), Positives = 73/204 (35%), Gaps = 33/204 (16%)
Query: 167 AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYP--LPYSPSPSLPVGPTAHGALP 224
A PPRP P P P TPP P PP PP P P P GP G LP
Sbjct: 161 AARTAPPRPNVPAPPPP--TPP-----PPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLP 213
Query: 225 PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGA-AGYSWSPQRS---MPPRP---------G 271
PV P P PT P L P + + PQ + +PP P G
Sbjct: 214 VVAPPVPCAPPPPPPPPPPTPP--PLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCG 271
Query: 272 YPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQ 331
YPG + P + AP P P PY + + P P LP + PL
Sbjct: 272 YPGLKAEPASPAQDAQEPPAPPPPLP---PYASCSPRASLP-APPLPGVNSSSETPPPLP 327
Query: 332 PPYPPGPAPP-----YGFPPPPGP 350
P P APP P PP P
Sbjct: 328 PKSPSFQAPPQKAGAQALPAPPAP 351
Score = 50.8 bits (120), Expect = 2e-06
Identities = 45/134 (33%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 216 GPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPR-GAAGYSWSPQRSMPPRPGYPG 274
G T G AP P + + SGPL P PA+ PR G + R+ PPRP P
Sbjct: 120 GKTGQGPGSRAPSPRLPNKTI-SGPLIP--PAS---PRLGNTSEAHGAARTAPPRPNVPA 173
Query: 275 TPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPY 334
P P P P P SP PP P+ P P P PP
Sbjct: 174 PPPPTPPPPPP-----PLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPP 228
Query: 335 PPGPAPPYGFPPPP 348
PP P PP P PP
Sbjct: 229 PPPPTPP---PLPP 239
Score = 49.7 bits (117), Expect = 4e-06
Identities = 58/201 (28%), Positives = 71/201 (35%), Gaps = 36/201 (17%)
Query: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVG------PTAHGAL-- 223
PP PPPP+ P P PPL PP P P +P S P AL
Sbjct: 4 PPPPPPPLPP------------PPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLA 51
Query: 224 ---PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAA---GYSWSPQRSMPPRPGYP---- 273
V+Q + S P + G+A G S P G+P
Sbjct: 52 DIQQGTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRP 111
Query: 274 -GTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQP 332
G A G G RAPSP P ++ G P P+L + + + P
Sbjct: 112 AGQRDVAGGKTGQGPGSRAPSPRLPNKT----ISGPLIPPASPRLGN-TSEAHGAARTAP 166
Query: 333 PYPPGPAPPYGFPPPPGPAWP 353
P P PAPP PPPP P P
Sbjct: 167 PRPNVPAPPPPTPPPPPPPLP 187
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 71.6 bits (174), Expect = 1e-12
Identities = 59/174 (33%), Positives = 71/174 (40%), Gaps = 26/174 (14%)
Query: 191 EEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQL 250
++Q QPP A+PP P P+ + GP A L AP VV P+ P G P+ Q+
Sbjct: 987 QQQQQPPPALPPGSQPIPPTGA--AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQI 1044
Query: 251 GPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPP 310
G AG + PQ+ P P GA PG P G PSP QQ+P G P
Sbjct: 1045 G---QAGSTAGPQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
Query: 311 YPIQP----------------QLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
P LPS P P PL PP P P+P P PP
Sbjct: 1098 GSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPL-PPDPTAPSPGTVTPVPP 1150
Score = 46.2 bits (108), Expect = 4e-05
Identities = 42/137 (30%), Positives = 49/137 (35%), Gaps = 31/137 (22%)
Query: 224 PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
PP P SQP P GP G + +P S+ P P G P G+ GP
Sbjct: 992 PPPALPPGSQP---------IPPTGAAGPPAVHGLAVAPA-SVVPAPAGSGAPPGSLGPS 1041
Query: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYG 343
+ G+A S PQQ QP PG P VP P+ P P P
Sbjct: 1042 EQI--GQAGSTAGPQQQ-------------QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ 1086
Query: 344 FPPP------PGPAWPG 354
PP PG PG
Sbjct: 1087 TPPSMMPGAVPGSGHPG 1103
Score = 36.2 bits (82), Expect = 0.046
Identities = 45/140 (32%), Positives = 55/140 (39%), Gaps = 20/140 (14%)
Query: 167 AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPA 226
AG PP P + Q +Q QP A P +P P +P P HG P+
Sbjct: 1029 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP----PGVP-PPGPHG---PS 1080
Query: 227 PFP-VVSQPSFYSGPL-GPTYP-AAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
PFP + PS G + G +P A P A + S P P PGTP+ P
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPL----PP 1135
Query: 284 YPLRGGRAPSPGYPQQSPYP 303
P APSPG P P
Sbjct: 1136 DP----TAPSPGTVTPVPPP 1151
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 71.2 bits (173), Expect = 1e-12
Identities = 70/209 (33%), Positives = 78/209 (37%), Gaps = 24/209 (11%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSL------ 213
P A E A A P PPP R P G P ++P PP P +P P+P
Sbjct: 75 PAAPAEGAPGAAP-EPPPAGRARPGGGGP---QRPGPPSPRRPL-VPAGPAPPAAKLRPP 129
Query: 214 PVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPA--AQLGPRGAAGYSWSPQRSMPPRPG 271
P G A PA V + P P GP PA A L R G P P PG
Sbjct: 130 PEGSAGSCAPVPAAAAVAAGPE--PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPG 187
Query: 272 YPGTPMGA---SGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQP----QLPSFPGQP 324
P P A +G L A +P + PA P P P Q P F G
Sbjct: 188 KPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAA 247
Query: 325 QPSVPL--QPPYPPGPAPPYGFPPPPGPA 351
P P PP P PA P PPPP PA
Sbjct: 248 APPAPAAPSPPAAPAPAAPAAAPPPPPPA 276
Score = 68.9 bits (167), Expect = 6e-12
Identities = 65/212 (30%), Positives = 75/212 (35%), Gaps = 29/212 (13%)
Query: 160 PRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTA 219
P A + G P RP PP P+V P PP A P S PV A
Sbjct: 90 PPAGRARPGGGGPQRPGPP-----SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAA 144
Query: 220 HGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGA 279
A P P P + P GP AA+ GP G P P +P PG
Sbjct: 145 AVAAGPEPAPAGP-----AKPAGPAALAARAGPGPGPGPGPGPGPG-PGKPAGPGAAQTL 198
Query: 280 SGPGYPLRGGRAPSPGYPQQS---------PYPATGGK----PPY-----PIQPQLPSFP 321
+G L A +P + P PA G PP+ P P PS P
Sbjct: 199 NGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPP 258
Query: 322 GQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P P+ P P PP PAP PP PA P
Sbjct: 259 AAPAPAAPAAAPPPPPPAPATLARPPGHPAGP 290
Score = 68.6 bits (166), Expect = 8e-12
Identities = 55/179 (30%), Positives = 68/179 (37%), Gaps = 4/179 (2%)
Query: 176 PPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPS 235
P + P+P+ P Q P + P P +PSP P A A PP P P + +
Sbjct: 222 PAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLA 281
Query: 236 FYSG-PLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSP 294
G P GP A + P AA S + P P G P G SG P AP+P
Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPA-AGGPAGVSGQPGPGAAAAAPAP 340
Query: 295 GYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
G +SP PP Q S P S+ + P G P PPP P P
Sbjct: 341 GVKAESPKRVVQAAPP-AAQTLAASGPASTAASMVIGPTM-QGALPSPAAVPPPAPGTP 397
Score = 51.2 bits (121), Expect = 1e-06
Identities = 58/201 (28%), Positives = 70/201 (34%), Gaps = 27/201 (13%)
Query: 170 APPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFP 229
AP P P P P P + P P A PP P P P+ + GA PAP P
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHP-AGPPTAAPAVPPPAAAQNGGSAGA-APAPAP 317
Query: 230 VVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGP------- 282
P+ SG GP AA P A SP+R + P T + ASGP
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAE---SPKRVVQAAPPAAQT-LAASGPASTAASM 373
Query: 283 --GYPLRGG-------RAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPG-----QPQPSV 328
G ++G P+PG P P A G + + G P
Sbjct: 374 VIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLA 433
Query: 329 PLQPPYPPGPAPPYGFPPPPG 349
P P P P F PPG
Sbjct: 434 PRLPQPPQNPTNIQNFQLPPG 454
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/114 (28%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 240 PLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQ 299
P P AA G G S SP + P P + P P G P G PQ+
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104
Query: 300 SPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
P P + +P P P P+ +P P P A P P PA P
Sbjct: 105 -PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,957,185
Number of Sequences: 37866
Number of extensions: 2002120
Number of successful extensions: 53936
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 2102
Number of HSP's that attempted gapping in prelim test: 12073
Number of HSP's gapped (non-prelim): 17678
length of query: 355
length of database: 18,247,518
effective HSP length: 103
effective length of query: 252
effective length of database: 14,347,320
effective search space: 3615524640
effective search space used: 3615524640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.