Search of human proteins with 57863295

Search of human proteins with 57863295

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57863295 hypothetical protein LOC23313 isoform b [Homo
sapiens]
         (404 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens]    820   0.0  
gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens]    785   0.0  
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi...    32   1.0  
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi...    32   1.0  
gi|63175654 fucokinase [Homo sapiens]                                  31   1.7  
gi|150456444 hypothetical protein LOC57578 [Homo sapiens]              31   2.3  
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]    30   3.0  
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]     30   3.0  
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             30   5.1  
gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]                     30   5.1  
gi|56118310 nuclear casein kinase and cyclin-dependent kinase su...    30   5.1  
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]             29   6.6  
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]       29   6.6  
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]        29   6.6  
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]       29   6.6  
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]        29   6.6  
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]          29   6.6  
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...    29   6.6  
gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo...    29   6.6  
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho...    29   6.6  
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]               29   6.6  
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]               29   6.6  
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]               29   6.6  
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]                29   6.6  
gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]    29   6.6  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        29   6.6  
gi|156105703 SUMO1/sentrin specific peptidase 6 isoform 2 [Homo ...    29   8.7  
gi|156105701 SUMO1/sentrin specific peptidase 6 isoform 1 [Homo ...    29   8.7  
gi|221136866 WD repeat domain 79 isoform 4 [Homo sapiens]              29   8.7  
gi|221136862 WD repeat domain 79 isoform 3 [Homo sapiens]              29   8.7  

>gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens]
          Length = 404

 Score =  820 bits (2119), Expect = 0.0
 Identities = 404/404 (100%), Positives = 404/404 (100%)

Query: 1   MLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLA 60
           MLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLA
Sbjct: 1   MLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLA 60

Query: 61  YSGSESGADGRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCA 120
           YSGSESGADGRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCA
Sbjct: 61  YSGSESGADGRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCA 120

Query: 121 VCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVG 180
           VCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVG
Sbjct: 121 VCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVG 180

Query: 181 EGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNM 240
           EGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNM
Sbjct: 181 EGEMVCVELVASDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNM 240

Query: 241 EFVRMKGPQGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRP 300
           EFVRMKGPQGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRP
Sbjct: 241 EFVRMKGPQGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRP 300

Query: 301 AFFSPSLKRKVPRNRIAEMKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLV 360
           AFFSPSLKRKVPRNRIAEMKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLV
Sbjct: 301 AFFSPSLKRKVPRNRIAEMKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLV 360

Query: 361 GSWLKLNRADGNFLLYAHLTYVTLPLHRILTDILEVRQKPILMT 404
           GSWLKLNRADGNFLLYAHLTYVTLPLHRILTDILEVRQKPILMT
Sbjct: 361 GSWLKLNRADGNFLLYAHLTYVTLPLHRILTDILEVRQKPILMT 404


>gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens]
          Length = 409

 Score =  785 bits (2028), Expect = 0.0
 Identities = 384/386 (99%), Positives = 385/386 (99%)

Query: 19  CGLGCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLAYSGSESGADGRKAAEPEV 78
           C +GCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLAYSGSESGADGRKAAEPEV
Sbjct: 24  CSMGCFKDDRIVFWTWMFSTYFMEKWAPRQDDMLFYVRRKLAYSGSESGADGRKAAEPEV 83

Query: 79  EVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQ 138
           EVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQ
Sbjct: 84  EVEVYRRDSKKLPGLGDPDIDWEESVCLNLILQKLDYMVTCAVCTRADGGDIHIHKKKSQ 143

Query: 139 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTF 198
           QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTF
Sbjct: 144 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNTF 203

Query: 199 QGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAV 258
           QGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAV
Sbjct: 204 QGVIFQGSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAV 263

Query: 259 SRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAE 318
           SRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAE
Sbjct: 264 SRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAE 323

Query: 319 MKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLVGSWLKLNRADGNFLLYAH 378
           MKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLVGSWLKLNRADGNFLLYAH
Sbjct: 324 MKKSHSANDSEEFFREDDGGADLHNATNLRSRSLSGTGRSLVGSWLKLNRADGNFLLYAH 383

Query: 379 LTYVTLPLHRILTDILEVRQKPILMT 404
           LTYVTLPLHRILTDILEVRQKPILMT
Sbjct: 384 LTYVTLPLHRILTDILEVRQKPILMT 409


>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
           sapiens]
          Length = 681

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 248 PQGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSL 307
           P+ + ++  + S  S+  + P GT  D +   P  ER +   T  TP    RP       
Sbjct: 346 PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQS 405

Query: 308 KRKVPRNR 315
           + ++ R R
Sbjct: 406 RDRLDRGR 413


>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
           sapiens]
          Length = 681

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 248 PQGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSL 307
           P+ + ++  + S  S+  + P GT  D +   P  ER +   T  TP    RP       
Sbjct: 346 PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQS 405

Query: 308 KRKVPRNR 315
           + ++ R R
Sbjct: 406 RDRLDRGR 413


>gi|63175654 fucokinase [Homo sapiens]
          Length = 1084

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 328 SEEFFREDDGGADLHNATNLRSRSLSGTGRSLVGSWL-KLNRADGNFLLYAHLTYVTLPL 386
           SE+  R   GG +LH  + L   S  GT   L G+ L  L RA G  +    L +  L L
Sbjct: 815 SEQLLRTFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHL 874

Query: 387 HRILT 391
            ++LT
Sbjct: 875 EQVLT 879


>gi|150456444 hypothetical protein LOC57578 [Homo sapiens]
          Length = 2458

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 261  VSTGDTSPCGTEEDSSPASPMHERVTSFSTPP 292
            ++ GD  P G    SSP+ P H  V S ST P
Sbjct: 1475 MNQGDDGPSGKNAASSPSVPSHPSVLSLSTAP 1506


>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
          Length = 2087

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 270 GTEEDSSPASPMHERVTSFST---PPTPERNNRPA--------FFSPSLKRKVPRN 314
           G+   S P SP+ E+++ F T    PT +++++P+         FSP + RK+ ++
Sbjct: 847 GSTASSEPVSPLQEKLSPFFTLDLSPTEDKSSKPSSFTEKVVYAFSPKIGRKLSKS 902


>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
          Length = 1738

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 11/56 (19%)

Query: 270 GTEEDSSPASPMHERVTSFST---PPTPERNNRPA--------FFSPSLKRKVPRN 314
           G+   S P SP+ E+++ F T    PT +++++P+         FSP + RK+ ++
Sbjct: 498 GSTASSEPVSPLQEKLSPFFTLDLSPTEDKSSKPSSFTEKVVYAFSPKIGRKLSKS 553


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 243 VRMKGPQGKGHAEMAVSRVSTGD--TSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRP 300
           VR +GP G+     A   V  GD  TSP G    SS  SP+         P +P+    P
Sbjct: 751 VRARGPGGENRDVEAQRLVPDGDGRTSPLGGARSSSQRSPVGPAGVRSPRPGSPQMQASP 810

Query: 301 A 301
           +
Sbjct: 811 S 811


>gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]
          Length = 619

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 262 STGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKK 321
           S   + P   + +SS ASP   RV   S  P+P R  R      S  R+V  N     ++
Sbjct: 197 SPDPSPPRRPQHNSSGASP--RRVRHDSPDPSPPRRARHGSSDISSPRRVHNNSPDTSRR 254

Query: 322 SHSANDSEEFFREDDGGADL-HNATNLRSRSLSG 354
           +  ++D+++  R      DL  N T    R+ SG
Sbjct: 255 TLGSSDTQQLRRARHDSPDLAPNVTYSLPRTKSG 288


>gi|56118310 nuclear casein kinase and cyclin-dependent kinase
           substrate 1 [Homo sapiens]
          Length = 243

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 249 QGKGHAEMAVSRVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERN 297
           +GKG      +  ++ + +P   EED  P SP  ++    ST P PE++
Sbjct: 184 KGKGKVGRPTASKASKEKTPSPKEEDEEPESPPEKKT---STSPPPEKS 229


>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
          Length = 935

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 272 EEDSSPASPMHERVT-SFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHSANDSE 329
           EED++PASP    V  + S     + N R    SP  +RK P N  +++ + HS+  ++
Sbjct: 121 EEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKQRKNPFNS-SKLPEGHSSQQTK 178


>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
          Length = 1863

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)

Query: 53   FYVRRKLAYSGSESGAD------GRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCL 106
            F VR    Y  SE   +      G K  EP+ EVEV   D K      +P++D+  +V +
Sbjct: 1402 FRVRAINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEK------EPEVDY-RTVTI 1454

Query: 107  NLILQKLD-YMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEE---------S 156
            N   +  D Y +   + +   G    + +KK+++V+A        +K +E         +
Sbjct: 1455 NTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMN 1514

Query: 157  KISYPNIFFMIDSFEE 172
             + +P +   +D+FEE
Sbjct: 1515 CLHHPKLVQCVDAFEE 1530


>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
          Length = 1914

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)

Query: 53   FYVRRKLAYSGSESGAD------GRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCL 106
            F VR    Y  SE   +      G K  EP+ EVEV   D K      +P++D+  +V +
Sbjct: 1402 FRVRAINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEK------EPEVDY-RTVTI 1454

Query: 107  NLILQKLD-YMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEE---------S 156
            N   +  D Y +   + +   G    + +KK+++V+A        +K +E         +
Sbjct: 1455 NTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMN 1514

Query: 157  KISYPNIFFMIDSFEE 172
             + +P +   +D+FEE
Sbjct: 1515 CLHHPKLVQCVDAFEE 1530


>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
          Length = 1794

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)

Query: 53   FYVRRKLAYSGSESGAD------GRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCL 106
            F VR    Y  SE   +      G K  EP+ EVEV   D K      +P++D+  +V +
Sbjct: 1333 FRVRAINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEK------EPEVDY-RTVTI 1385

Query: 107  NLILQKLD-YMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEE---------S 156
            N   +  D Y +   + +   G    + +KK+++V+A        +K +E         +
Sbjct: 1386 NTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMN 1445

Query: 157  KISYPNIFFMIDSFEE 172
             + +P +   +D+FEE
Sbjct: 1446 CLHHPKLVQCVDAFEE 1461


>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
          Length = 1845

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)

Query: 53   FYVRRKLAYSGSESGAD------GRKAAEPEVEVEVYRRDSKKLPGLGDPDIDWEESVCL 106
            F VR    Y  SE   +      G K  EP+ EVEV   D K      +P++D+  +V +
Sbjct: 1333 FRVRAINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEK------EPEVDY-RTVTI 1385

Query: 107  NLILQKLD-YMVTCAVCTRADGGDIHIHKKKSQQVFASPSKHPMDSKGEE---------S 156
            N   +  D Y +   + +   G    + +KK+++V+A        +K +E         +
Sbjct: 1386 NTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMN 1445

Query: 157  KISYPNIFFMIDSFEE 172
             + +P +   +D+FEE
Sbjct: 1446 CLHHPKLVQCVDAFEE 1461


>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
          Length = 1133

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 266  TSPCGTEEDSS--PASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKS 322
            T P  T+E  +  P  P  +R      PP P+R  R     PS  RK  R R A+++ S
Sbjct: 1010 TPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKR-RRVGDVEPS--RKPKRRRAADVEPS 1065


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
            family member 2 [Homo sapiens]
          Length = 1122

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 266  TSPCGTEEDSS--PASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKS 322
            T P  T+E  +  P  P  +R      PP P+R  R     PS  RK  R R A+++ S
Sbjct: 1028 TPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKR-RRVGDVEPS--RKPKRRRAADVEPS 1083


>gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo
           sapiens]
          Length = 434

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 110 LQKLDYMVTCAVCTRADGGDIHIHKKK 136
           L +L ++  C +C RA  G IH H K+
Sbjct: 190 LSELVHLTCCRICVRALSGTIHYHNKQ 216


>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
           sapiens]
          Length = 678

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 266 TSPCGTEEDSS--PASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKS 322
           T P  T+E  +  P  P  +R      PP P+R  R     PS  RK  R R A+++ S
Sbjct: 555 TPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKR-RRVGDVEPS--RKPKRRRAADVEPS 610


>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
          Length = 1493

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 205 GSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAVSRVSTG 264
           G+++     K  D +VS   R++ K S    K S  +  R  G + K     + SR  T 
Sbjct: 145 GALKTPGTGKTDDAKVSEKGRLSPKASQ--VKRSPSDAGRSSGDESKKPLPSS-SRTPTA 201

Query: 265 DTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHS 324
           + +  G ++ S  A+ +   +T+     T    +R A        K+P++     + +  
Sbjct: 202 NANSFGFKKQSGSAAGL-AMITASGVTVT----SRSATLG-----KIPKSSALVSRSAGR 251

Query: 325 ANDSEEFFREDDGGADLHNATNLRSRSLSGTGRS 358
            +  +    +DDG   L + TNL+ RSL    +S
Sbjct: 252 KSSMDGAQNQDDGYLALSSRTNLQYRSLPRPSKS 285


>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
          Length = 2365

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 205  GSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAVSRVSTG 264
            G+++     K  D +VS   R++ K S    K S  +  R  G + K     + SR  T 
Sbjct: 995  GALKTPGTGKTDDAKVSEKGRLSPKASQ--VKRSPSDAGRSSGDESKKPLPSS-SRTPTA 1051

Query: 265  DTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHS 324
            + +  G ++ S  A+ +   +T+     T    +R A        K+P++     + +  
Sbjct: 1052 NANSFGFKKQSGSAAGL-AMITASGVTVT----SRSATLG-----KIPKSSALVSRSAGR 1101

Query: 325  ANDSEEFFREDDGGADLHNATNLRSRSLSGTGRS 358
             +  +    +DDG   L + TNL+ RSL    +S
Sbjct: 1102 KSSMDGAQNQDDGYLALSSRTNLQYRSLPRPSKS 1135


>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
          Length = 2432

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 205  GSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAVSRVSTG 264
            G+++     K  D +VS   R++ K S    K S  +  R  G + K     + SR  T 
Sbjct: 1059 GALKTPGTGKTDDAKVSEKGRLSPKASQ--VKRSPSDAGRSSGDESKKPLPSS-SRTPTA 1115

Query: 265  DTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHS 324
            + +  G ++ S  A+ +   +T+     T    +R A        K+P++     + +  
Sbjct: 1116 NANSFGFKKQSGSAAGL-AMITASGVTVT----SRSATLG-----KIPKSSALVSRSAGR 1165

Query: 325  ANDSEEFFREDDGGADLHNATNLRSRSLSGTGRS 358
             +  +    +DDG   L + TNL+ RSL    +S
Sbjct: 1166 KSSMDGAQNQDDGYLALSSRTNLQYRSLPRPSKS 1199


>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
          Length = 2429

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 205  GSIRYEALKKVYDNRVSVAARMAQKMSFGFYKYSNMEFVRMKGPQGKGHAEMAVSRVSTG 264
            G+++     K  D +VS   R++ K S    K S  +  R  G + K     + SR  T 
Sbjct: 1059 GALKTPGTGKTDDAKVSEKGRLSPKASQ--VKRSPSDAGRSSGDESKKPLPSS-SRTPTA 1115

Query: 265  DTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHS 324
            + +  G ++ S  A+ +   +T+     T    +R A        K+P++     + +  
Sbjct: 1116 NANSFGFKKQSGSAAGL-AMITASGVTVT----SRSATLG-----KIPKSSALVSRSAGR 1165

Query: 325  ANDSEEFFREDDGGADLHNATNLRSRSLSGTGRS 358
             +  +    +DDG   L + TNL+ RSL    +S
Sbjct: 1166 KSSMDGAQNQDDGYLALSSRTNLQYRSLPRPSKS 1199


>gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]
          Length = 1090

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 41  MEKWAPRQDDMLFYVRRK-LAYSGSESGADGRKAAEPEVEVEVYRRDSKKLP--GLGDPD 97
           ++KW PR++++ F++R +      SE G  GR+  E   +  V     +K    G+G+P 
Sbjct: 66  LQKWGPRREEVKFFLRHEDSPTENSEQG--GRQTQEQRTQRNVINVPGEKRTENGVGNPR 123

Query: 98  ID 99
           ++
Sbjct: 124 VE 125


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 260  RVSTGDTSPCGTEEDSSPASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNR--IA 317
            R S   TSP       S  SP+  R +   TPP   R +R    +P L RK  R+R  +A
Sbjct: 1992 RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSR--TPLLPRKRSRSRSPLA 2049

Query: 318  EMKKSHS 324
              ++S S
Sbjct: 2050 IRRRSRS 2056


>gi|156105703 SUMO1/sentrin specific peptidase 6 isoform 2 [Homo
           sapiens]
          Length = 1105

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 20/122 (16%)

Query: 269 CGTEEDS---SPASPMHERVTSFSTPPTPER-------------NNRPAFFSPSLKRKVP 312
           C T EDS   S AS M     + S  P  ++             N       P  KR + 
Sbjct: 789 CSTVEDSCISSSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNIC 848

Query: 313 RNRIAEMKKSHSANDSEEFFREDDGGADLHNAT----NLRSRSLSGTGRSLVGSWLKLNR 368
             + +  K +H+A+++EEF + +     + + T     L++ SLS T  +   S ++LN 
Sbjct: 849 SVKYSVKKINHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNY 908

Query: 369 AD 370
           +D
Sbjct: 909 SD 910


>gi|156105701 SUMO1/sentrin specific peptidase 6 isoform 1 [Homo
           sapiens]
          Length = 1112

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 20/122 (16%)

Query: 269 CGTEEDS---SPASPMHERVTSFSTPPTPER-------------NNRPAFFSPSLKRKVP 312
           C T EDS   S AS M     + S  P  ++             N       P  KR + 
Sbjct: 796 CSTVEDSCISSSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNIC 855

Query: 313 RNRIAEMKKSHSANDSEEFFREDDGGADLHNAT----NLRSRSLSGTGRSLVGSWLKLNR 368
             + +  K +H+A+++EEF + +     + + T     L++ SLS T  +   S ++LN 
Sbjct: 856 SVKYSVKKINHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNY 915

Query: 369 AD 370
           +D
Sbjct: 916 SD 917


>gi|221136866 WD repeat domain 79 isoform 4 [Homo sapiens]
          Length = 548

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 6/38 (15%)

Query: 269 CGTEEDSSPA------SPMHERVTSFSTPPTPERNNRP 300
           C +++D +PA      SPM++   S   PP PER + P
Sbjct: 14  CPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPP 51


>gi|221136862 WD repeat domain 79 isoform 3 [Homo sapiens]
          Length = 548

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 6/38 (15%)

Query: 269 CGTEEDSSPA------SPMHERVTSFSTPPTPERNNRP 300
           C +++D +PA      SPM++   S   PP PER + P
Sbjct: 14  CPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPP 51


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,236,840
Number of Sequences: 37866
Number of extensions: 779829
Number of successful extensions: 2465
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2452
Number of HSP's gapped (non-prelim): 41
length of query: 404
length of database: 18,247,518
effective HSP length: 105
effective length of query: 299
effective length of database: 14,271,588
effective search space: 4267204812
effective search space used: 4267204812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.