Guide to the Human Genome
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Name: FTH1 Sequence: fasta or formatted (183aa) NCBI GI: 56682959
Description:

ferritin, heavy polypeptide 1

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         13           2
 C cysteine            1.6          3           1
 D aspartate           8.2         15           2
 E glutamate           8.7         16           2
 F phenylalanine       3.3          6           1
 G glycine             3.8          7           2
 H histidine           5.5         10           1
 I isoleucine          3.3          6           1
 K lysine              7.1         13           2
 L leucine            12.0         22           2
 M methionine          2.7          5           1
 N asparagine          6.6         12           1
 P proline             1.6          3           1
 Q glutamine           5.5         10           1
 R arginine            3.8          7           1
 S serine              6.6         12           1
 T threonine           3.8          7           2
 V valine              3.3          6           1
 W tryptophan          0.5          1           1
 Y tyrosine            4.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ferritin, heavy polypeptide 1 
FTMT                  0.784   ferritin mitochondrial 
FTHL17                0.622   ferritin, heavy polypeptide-like 17 
LOC139431             0.537   PREDICTED: similar to hCG1799751 
LOC139431             0.537   PREDICTED: similar to hCG1799751 
LOC139431             0.537   PREDICTED: hypothetical protein LOC139431 
FTL                   0.528   ferritin, light polypeptide 
LOC642337             0.128   PREDICTED: similar to hCG1648021 
LOC642337             0.128   PREDICTED: similar to hCG1648021 
LOC642337             0.128   PREDICTED: similar to hCG1648021 
LOC100292771          0.045   PREDICTED: hypothetical protein 
LOC100287790          0.045   PREDICTED: hypothetical protein 
LOC100287790          0.045   PREDICTED: hypothetical protein XP_002342430 
MAP3K2                0.014   mitogen-activated protein kinase kinase kinase 2 [Ho...
ANKRD26               0.011   ankyrin repeat domain 26 
WNT2                  0.011   wingless-type MMTV integration site family member 2 p...
CNBD1                 0.011   cyclic nucleotide binding domain containing 1 
UBR1                  0.009   ubiquitin protein ligase E3 component n-recognin 1 [...
ZFYVE19               0.009   zinc finger, FYVE domain containing 19 
WNT2B                 0.009   wingless-type MMTV integration site family, member 2...
WNT2B                 0.009   wingless-type MMTV integration site family, member 2...
SENP6                 0.006   SUMO1/sentrin specific peptidase 6 isoform 2 
SENP6                 0.006   SUMO1/sentrin specific peptidase 6 isoform 1 
MAP3K3                0.006   mitogen-activated protein kinase kinase kinase 3 iso...
MAP3K3                0.006   mitogen-activated protein kinase kinase kinase 3 iso...
CCDC88A               0.006   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 1 
WNT7B                 0.006   wingless-type MMTV integration site family, member 7...
NARG1L                0.006   NMDA receptor regulated 1-like protein isoform 1 [Ho...
POLQ                  0.006   DNA polymerase theta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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