Guide to the Human Genome
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Name: FTHL17 Sequence: fasta or formatted (183aa) NCBI GI: 13994244
Description:

ferritin, heavy polypeptide-like 17

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         12           2
 C cysteine            2.7          5           1
 D aspartate           5.5         10           2
 E glutamate           7.7         14           1
 F phenylalanine       4.4          8           2
 G glycine             5.5         10           2
 H histidine           4.4          8           1
 I isoleucine          3.3          6           1
 K lysine              6.0         11           1
 L leucine            14.2         26           2
 M methionine          2.7          5           1
 N asparagine          4.4          8           1
 P proline             2.2          4           1
 Q glutamine           5.5         10           1
 R arginine            4.9          9           1
 S serine              6.0         11           1
 T threonine           3.8          7           1
 V valine              4.4          8           1
 W tryptophan          0.5          1           1
 Y tyrosine            5.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ferritin, heavy polypeptide-like 17 
FTH1                  0.624   ferritin, heavy polypeptide 1 
FTMT                  0.581   ferritin mitochondrial 
LOC139431             0.541   PREDICTED: similar to hCG1799751 
LOC139431             0.541   PREDICTED: similar to hCG1799751 
LOC139431             0.541   PREDICTED: hypothetical protein LOC139431 
FTL                   0.427   ferritin, light polypeptide 
LOC642337             0.100   PREDICTED: similar to hCG1648021 
LOC642337             0.100   PREDICTED: similar to hCG1648021 
LOC642337             0.100   PREDICTED: similar to hCG1648021 
YARS2                 0.017   tyrosyl-tRNA synthetase 2, mitochondrial 
LOC100292771          0.014   PREDICTED: hypothetical protein 
LOC100287790          0.014   PREDICTED: hypothetical protein 
LOC100287790          0.014   PREDICTED: hypothetical protein XP_002342430 
HISPPD1               0.011   Histidine acid phosphatase domain containing 1 [Homo...
CCDC88A               0.009   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.009   coiled-coil domain containing 88A isoform 1 
HKDC1                 0.009   hexokinase domain containing 1 
JAK3                  0.006   Janus kinase 3 
ZCCHC11               0.006   zinc finger, CCHC domain containing 11 isoform a [Ho...
ZCCHC11               0.006   zinc finger, CCHC domain containing 11 isoform b [Ho...
ZCCHC11               0.006   zinc finger, CCHC domain containing 11 isoform c [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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