Guide to the Human Genome
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Name: RNGTT Sequence: fasta or formatted (597aa) NCBI GI: 134142828
Description:

RNA guanylyltransferase and 5'-phosphatase

Referenced in:

Dual-Specificity Phosphatases
Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         22           2
 C cysteine            2.7         16           1
 D aspartate           6.2         37           2
 E glutamate           7.4         44           2
 F phenylalanine       5.5         33           2
 G glycine             6.9         41           2
 H histidine           2.0         12           2
 I isoleucine          5.4         32           2
 K lysine              8.0         48           2
 L leucine             8.4         50           2
 M methionine          3.0         18           2
 N asparagine          4.9         29           2
 P proline             7.4         44           5
 Q glutamine           3.7         22           2
 R arginine            6.5         39           2
 S serine              4.7         28           2
 T threonine           4.9         29           2
 V valine              5.0         30           1
 W tryptophan          1.2          7           1
 Y tyrosine            2.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA guanylyltransferase and 5'-phosphatase 
DUSP11                0.061   dual specificity phosphatase 11 
DUSP23                0.019   dual specificity phosphatase 23 
PTPMT1                0.011   protein tyrosine phosphatase, mitochondrial 1 isofo...
CDC14B                0.011   CDC14 homolog B isoform 3 
CDC14B                0.011   CDC14 homolog B isoform 1 
CDC14B                0.011   CDC14 homolog B isoform 2 
CDC14A                0.009   CDC14 homolog A isoform 3 
CDC14A                0.009   CDC14 homolog A isoform 1 
CDC14A                0.009   CDC14 homolog A isoform 2 
NCL                   0.008   nucleolin 
TPTE                  0.008   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.008   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.008   transmembrane phosphatase with tensin homology isof...
PTP4A1                0.008   protein tyrosine phosphatase type IVA, member 1 [Homo...
PHACTR2               0.008   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.008   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.008   phosphatase and actin regulator 2 isoform 2 
PHACTR2               0.008   phosphatase and actin regulator 2 isoform 1 
PTP4A2                0.008   protein tyrosine phosphatase type IVA, member 2 isof...
PTP4A3                0.007   protein tyrosine phosphatase type IVA, member 3 isof...
UBTF                  0.007   upstream binding transcription factor, RNA polymera...
UBTF                  0.007   upstream binding transcription factor, RNA polymera...
UBTF                  0.007   upstream binding transcription factor, RNA polymerase...
C2orf39               0.007   hypothetical protein LOC92749 
LMOD3                 0.007   leiomodin 3 (fetal) 
EPM2A                 0.007   laforin isoform a 
RRP8                  0.006   ribosomal RNA processing 8, methyltransferase, homol...
TRIM55                0.006   tripartite motif-containing 55 isoform 3 
TRIM55                0.006   tripartite motif-containing 55 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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