Guide to the Human Genome
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Name: LOC649264 Sequence: fasta or formatted (131aa) NCBI GI: 239752162
Description:

PREDICTED: similar to hCG40360

Not currently referenced in the text

Other entries for this name:
alt prot {327aa} PREDICTED: similar to hCG40360
alt prot {327aa} PREDICTED: similar to hCG40360
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         11           2
 C cysteine            0.0          0           0
 D aspartate           5.3          7           1
 E glutamate           3.8          5           1
 F phenylalanine       8.4         11           2
 G glycine            14.5         19           3
 H histidine           3.8          5           2
 I isoleucine          4.6          6           1
 K lysine              1.5          2           1
 L leucine             6.9          9           2
 M methionine          1.5          2           1
 N asparagine          1.5          2           1
 P proline             6.9          9           2
 Q glutamine           3.8          5           1
 R arginine            4.6          6           2
 S serine              7.6         10           2
 T threonine           3.8          5           2
 V valine              6.1          8           2
 W tryptophan          5.3          7           2
 Y tyrosine            1.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG40360 
CES7                  0.565   carboxylesterase 7 isoform 1 
CES7                  0.565   carboxylesterase 7 isoform 2 
LOC649264             0.535   PREDICTED: similar to hCG40360 
LOC649264             0.535   PREDICTED: similar to hCG40360 
CES2                  0.346   carboxylesterase 2 isoform 2 
CES2                  0.346   carboxylesterase 2 isoform 1 
CES8                  0.338   carboxylesterase 8 (putative) 
CES3                  0.331   carboxylesterase 3 
CES1                  0.331   carboxylesterase 1 isoform a precursor 
CES1                  0.331   carboxylesterase 1 isoform b precursor 
CES1                  0.331   carboxylesterase 1 isoform c precursor 
NLGN1                 0.262   neuroligin 1 
NLGN2                 0.262   neuroligin 2 
NLGN4X                0.258   X-linked neuroligin 4 
NLGN4X                0.258   X-linked neuroligin 4 
NLGN3                 0.258   neuroligin 3 
NLGN4Y                0.246   neuroligin 4, Y-linked 
BCHE                  0.227   butyrylcholinesterase precursor 
ACHE                  0.219   acetylcholinesterase isoform E4-E6 precursor 
ACHE                  0.219   acetylcholinesterase isoform E4-E5 precursor 
CEL                   0.219   carboxyl ester lipase precursor 
TG                    0.185   thyroglobulin 
AADACL4               0.027   arylacetamide deacetylase-like 4 
LOC100129848          0.012   PREDICTED: hypothetical protein 
LOC100129848          0.012   PREDICTED: hypothetical protein 
LOC100129848          0.012   PREDICTED: hypothetical protein 
ISM2                  0.008   isthmin 2 homolog isoform 1 
C14orf135             0.004   hepatitis C virus F protein-binding protein 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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