Guide to the Human Genome
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Name: LOC649264 Sequence: fasta or formatted (327aa) NCBI GI: 169215613
Description:

PREDICTED: similar to hCG40360

Not currently referenced in the text

Other entries for this name:
alt prot {327aa} PREDICTED: similar to hCG40360
alt prot {131aa} PREDICTED: similar to hCG40360
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         28           2
 C cysteine            1.2          4           1
 D aspartate           4.6         15           1
 E glutamate           5.2         17           1
 F phenylalanine       6.4         21           2
 G glycine             7.0         23           3
 H histidine           3.1         10           1
 I isoleucine          6.4         21           2
 K lysine              4.6         15           1
 L leucine            11.0         36           3
 M methionine          1.5          5           1
 N asparagine          2.8          9           2
 P proline             5.5         18           1
 Q glutamine           5.2         17           2
 R arginine            3.1         10           1
 S serine              8.6         28           2
 T threonine           4.6         15           2
 V valine              6.7         22           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG40360 
LOC649264             0.997   PREDICTED: similar to hCG40360 
CES7                  0.766   carboxylesterase 7 isoform 2 
CES7                  0.765   carboxylesterase 7 isoform 1 
CES2                  0.323   carboxylesterase 2 isoform 2 
CES2                  0.323   carboxylesterase 2 isoform 1 
CES8                  0.273   carboxylesterase 8 (putative) 
CES1                  0.270   carboxylesterase 1 isoform c precursor 
CES1                  0.269   carboxylesterase 1 isoform a precursor 
CES1                  0.269   carboxylesterase 1 isoform b precursor 
CES3                  0.261   carboxylesterase 3 
LOC649264             0.221   PREDICTED: similar to hCG40360 
NLGN4X                0.207   X-linked neuroligin 4 
NLGN4X                0.207   X-linked neuroligin 4 
NLGN2                 0.203   neuroligin 2 
NLGN4Y                0.199   neuroligin 4, Y-linked 
NLGN3                 0.199   neuroligin 3 
NLGN1                 0.186   neuroligin 1 
BCHE                  0.170   butyrylcholinesterase precursor 
CEL                   0.161   carboxyl ester lipase precursor 
ACHE                  0.148   acetylcholinesterase isoform E4-E6 precursor 
ACHE                  0.148   acetylcholinesterase isoform E4-E5 precursor 
TG                    0.111   thyroglobulin 
AADACL4               0.022   arylacetamide deacetylase-like 4 
PITPNM1               0.010   phosphatidylinositol transfer protein, membrane-ass...
AADACL2               0.008   arylacetamide deacetylase-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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