Guide to the Human Genome
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Search of human proteins with 55749431

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55749431 transcription elongation factor A (SII)-like 3
[Homo sapiens]
         (200 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55749431 transcription elongation factor A (SII)-like 3 [Homo...   419   e-117
gi|14249718 transcription elongation factor A (SII)-like 3 [Homo...   419   e-117
gi|61175239 transcription elongation factor A (SII)-like 5 [Homo...   376   e-105
gi|118600971 transcription elongation factor A (SII)-like 6 [Hom...   354   2e-98
gi|55749459 transcription elongation factor A (SII)-like 4 [Homo...   182   2e-46
gi|55749442 transcription elongation factor A (SII)-like 4 [Homo...   182   2e-46
gi|65505873 transcription elongation factor A (SII)-like 4 [Homo...   182   2e-46
gi|55749451 transcription elongation factor A (SII)-like 4 [Homo...   182   2e-46
gi|17933774 transcription elongation factor A (SII)-like 2 [Homo...   171   3e-43
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    60   1e-09
gi|55749466 transcription elongation factor A (SII)-like 8 [Homo...    56   2e-08
gi|23503247 transcription elongation factor A (SII)-like 8 [Homo...    56   2e-08
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              55   3e-08
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               54   7e-08
gi|55956788 nucleolin [Homo sapiens]                                   54   1e-07
gi|21361639 DIPB protein [Homo sapiens]                                50   1e-06
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    50   1e-06
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            49   2e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens]               49   3e-06
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    49   3e-06
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    49   3e-06
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo...    48   6e-06
gi|55743140 WW domain binding protein 5 [Homo sapiens]                 47   8e-06
gi|55743147 WW domain binding protein 5 [Homo sapiens]                 47   8e-06
gi|10047100 WW domain binding protein 5 [Homo sapiens]                 47   8e-06
gi|55743145 WW domain binding protein 5 [Homo sapiens]                 47   8e-06
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          47   1e-05
gi|148746195 trichohyalin [Homo sapiens]                               47   1e-05
gi|171916097 repetin [Homo sapiens]                                    47   1e-05
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    47   1e-05

>gi|55749431 transcription elongation factor A (SII)-like 3 [Homo
           sapiens]
          Length = 200

 Score =  419 bits (1076), Expect = e-117
 Identities = 200/200 (100%), Positives = 200/200 (100%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
           MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL
Sbjct: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60

Query: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
           EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD
Sbjct: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120

Query: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG 180
           SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG
Sbjct: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG 180

Query: 181 VRGVRGGGRGQRGLHDIPYL 200
           VRGVRGGGRGQRGLHDIPYL
Sbjct: 181 VRGVRGGGRGQRGLHDIPYL 200


>gi|14249718 transcription elongation factor A (SII)-like 3 [Homo
           sapiens]
          Length = 200

 Score =  419 bits (1076), Expect = e-117
 Identities = 200/200 (100%), Positives = 200/200 (100%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
           MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL
Sbjct: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60

Query: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
           EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD
Sbjct: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120

Query: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG 180
           SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG
Sbjct: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG 180

Query: 181 VRGVRGGGRGQRGLHDIPYL 200
           VRGVRGGGRGQRGLHDIPYL
Sbjct: 181 VRGVRGGGRGQRGLHDIPYL 200


>gi|61175239 transcription elongation factor A (SII)-like 5 [Homo
           sapiens]
          Length = 206

 Score =  376 bits (966), Expect = e-105
 Identities = 182/206 (88%), Positives = 191/206 (92%), Gaps = 6/206 (2%)

Query: 1   MEKPYNKNEG------NLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEP 54
           MEK Y +NEG      NLE+EGKPEDE   +DEGKSDEEEKPD+EGKTECEGKREDEGEP
Sbjct: 1   MEKLYKENEGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPDMEGKTECEGKREDEGEP 60

Query: 55  GDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT 114
           GDEGQLEDEG+QEKQG+SEGE KPQ EGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT
Sbjct: 61  GDEGQLEDEGNQEKQGKSEGEDKPQSEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT 120

Query: 115 DRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA 174
           DRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA
Sbjct: 121 DRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA 180

Query: 175 PRGQRGVRGVRGGGRGQRGLHDIPYL 200
           PRGQRGVRGVRGGGRGQ+ L D+PY+
Sbjct: 181 PRGQRGVRGVRGGGRGQKDLEDVPYV 206


>gi|118600971 transcription elongation factor A (SII)-like 6 [Homo
           sapiens]
          Length = 183

 Score =  354 bits (909), Expect = 2e-98
 Identities = 171/183 (93%), Positives = 175/183 (95%), Gaps = 1/183 (0%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
           MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPD EGKTECEGKR+ EGEPGDEGQL
Sbjct: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDAEGKTECEGKRKAEGEPGDEGQL 60

Query: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
           ED+GSQEKQG+SEGEGKPQGEGKPASQAKPE QPRAAEKRPA DYVPRKAKRKTDRGTDD
Sbjct: 61  EDKGSQEKQGKSEGEGKPQGEGKPASQAKPEGQPRAAEKRPAGDYVPRKAKRKTDRGTDD 120

Query: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG 180
           SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA +G  G
Sbjct: 121 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA-QGDNG 179

Query: 181 VRG 183
           V G
Sbjct: 180 VSG 182


>gi|55749459 transcription elongation factor A (SII)-like 4 [Homo
           sapiens]
          Length = 215

 Score =  182 bits (462), Expect = 2e-46
 Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 19/217 (8%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDVEGKTECEGKREDE---- 51
           MEK Y++NEG   N+GK E+E +P DE K +     E++K + EGKTE +GK  DE    
Sbjct: 1   MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60

Query: 52  --GEPGDEGQLED-----EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED 104
             G+P  EG+ ++     EG  E +G SE EGKP+ EGKP S+ +P S+ RAA KRPAED
Sbjct: 61  DKGKPESEGEAKEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAED 120

Query: 105 YVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFH 163
            VPRKAKRKT++G     K+ +E + + + S+E+M+RE  ++++ Q+E RK KQK+G F 
Sbjct: 121 DVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFL 180

Query: 164 WMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
           WMQR++QDPF PRG R  RG  G    +R + DIPY+
Sbjct: 181 WMQRNLQDPFYPRGPREFRG--GCRAPRRDIEDIPYV 215


>gi|55749442 transcription elongation factor A (SII)-like 4 [Homo
           sapiens]
          Length = 215

 Score =  182 bits (462), Expect = 2e-46
 Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 19/217 (8%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDVEGKTECEGKREDE---- 51
           MEK Y++NEG   N+GK E+E +P DE K +     E++K + EGKTE +GK  DE    
Sbjct: 1   MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60

Query: 52  --GEPGDEGQLED-----EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED 104
             G+P  EG+ ++     EG  E +G SE EGKP+ EGKP S+ +P S+ RAA KRPAED
Sbjct: 61  DKGKPESEGEAKEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAED 120

Query: 105 YVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFH 163
            VPRKAKRKT++G     K+ +E + + + S+E+M+RE  ++++ Q+E RK KQK+G F 
Sbjct: 121 DVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFL 180

Query: 164 WMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
           WMQR++QDPF PRG R  RG  G    +R + DIPY+
Sbjct: 181 WMQRNLQDPFYPRGPREFRG--GCRAPRRDIEDIPYV 215


>gi|65505873 transcription elongation factor A (SII)-like 4 [Homo
           sapiens]
          Length = 215

 Score =  182 bits (462), Expect = 2e-46
 Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 19/217 (8%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDVEGKTECEGKREDE---- 51
           MEK Y++NEG   N+GK E+E +P DE K +     E++K + EGKTE +GK  DE    
Sbjct: 1   MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60

Query: 52  --GEPGDEGQLED-----EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED 104
             G+P  EG+ ++     EG  E +G SE EGKP+ EGKP S+ +P S+ RAA KRPAED
Sbjct: 61  DKGKPESEGEAKEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAED 120

Query: 105 YVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFH 163
            VPRKAKRKT++G     K+ +E + + + S+E+M+RE  ++++ Q+E RK KQK+G F 
Sbjct: 121 DVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFL 180

Query: 164 WMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
           WMQR++QDPF PRG R  RG  G    +R + DIPY+
Sbjct: 181 WMQRNLQDPFYPRGPREFRG--GCRAPRRDIEDIPYV 215


>gi|55749451 transcription elongation factor A (SII)-like 4 [Homo
           sapiens]
          Length = 215

 Score =  182 bits (462), Expect = 2e-46
 Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 19/217 (8%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDVEGKTECEGKREDE---- 51
           MEK Y++NEG   N+GK E+E +P DE K +     E++K + EGKTE +GK  DE    
Sbjct: 1   MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60

Query: 52  --GEPGDEGQLED-----EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED 104
             G+P  EG+ ++     EG  E +G SE EGKP+ EGKP S+ +P S+ RAA KRPAED
Sbjct: 61  DKGKPESEGEAKEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAED 120

Query: 105 YVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFH 163
            VPRKAKRKT++G     K+ +E + + + S+E+M+RE  ++++ Q+E RK KQK+G F 
Sbjct: 121 DVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFL 180

Query: 164 WMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
           WMQR++QDPF PRG R  RG  G    +R + DIPY+
Sbjct: 181 WMQRNLQDPFYPRGPREFRG--GCRAPRRDIEDIPYV 215


>gi|17933774 transcription elongation factor A (SII)-like 2 [Homo
           sapiens]
          Length = 227

 Score =  171 bits (434), Expect = 3e-43
 Identities = 95/229 (41%), Positives = 138/229 (60%), Gaps = 31/229 (13%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD----------------------------E 32
           MEK +N+NEG   N+GK ++E +P  EGK +                            +
Sbjct: 1   MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60

Query: 33  EEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPES 92
           +EKP+  GK + EGK E +G+   +G  + EG  E+ GR+EGEG+P  E +P S+ +PES
Sbjct: 61  KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120

Query: 93  QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
           + RAA KRPAED +PRKAKRKT++G     K  +E + + + S+E+M+RE  +++R +++
Sbjct: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180

Query: 153 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
            RK KQK+G F WMQR++QDPF PRG R  RG  G    +R   DIPY+
Sbjct: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV 227


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
            sapiens]
          Length = 1152

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 18/184 (9%)

Query: 13   ENEGKPEDEVEPDDEGKSDEEEKPDVEGKT-ECEGKREDEGEPGDEGQLEDEGSQEKQGR 71
            E EG+ E E   ++EG+ + EE+ + EG+  E EG+ E+    G+E + E+EG +E +G 
Sbjct: 950  EEEGEWEGE---EEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGE 1006

Query: 72   SEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQE 131
             EGEG+ + E +   + + E +    E    E     + + K   G ++     +E+ +E
Sbjct: 1007 EEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEE 1066

Query: 132  ---RHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGG 188
               +    EE  R+ G+  +   +++   K G     Q+           + V   +G G
Sbjct: 1067 GKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQK-----------KSVTNTQGNG 1115

Query: 189  RGQR 192
            + QR
Sbjct: 1116 KEQR 1119



 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 29/180 (16%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEG-KTECEGKREDEGEPGD---- 56
            E+   + EG  E EG+ E+E     EG+ + EE+ + EG + E EGK E+EGE G+    
Sbjct: 879  EEEEGEGEGEEEGEGEGEEE-----EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGE 933

Query: 57   ----EGQLED---EGSQE------KQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAE 103
                EG+ ED   EG +E      ++   EGEG+ +GEG+   + + E +    E    E
Sbjct: 934  EEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGE-GEEGEGEGEEEEGEGEGEE 992

Query: 104  DYVPRKAKRKTDRGTDDSPKDSQEDLQ---ERHLSSEEMMRECGDVSRAQEELRKKQKMG 160
            +    + + + + G ++   + +E+ +   E  +  EE   E G+    +EE  +++K G
Sbjct: 993  EEGEEEGEEEGE-GEEEGEGEGEEEEEGEVEGEVEGEEGEGE-GEEEEGEEEGEEREKEG 1050



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 6   NKNEGNLENEGKPEDEVEPDDEGKS-DEEEKPDVEGKTECEGKREDEGEPGDEGQL---- 60
           +K  G +E  G+ E E+   +E K  D EE+   E +   + +R  E E G E +     
Sbjct: 680 DKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGE 739

Query: 61  EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
           E+EG +E++   EGEGK +GEG+   + + E +    E++  E    R  K +      D
Sbjct: 740 EEEGDREEEEEKEGEGKEEGEGE---EVEGEREKEEGERKKEE----RAGKEEKGEEEGD 792

Query: 121 SPKDSQEDLQERHLSSEEMMR-ECGDVSRAQEELRKKQKMG 160
             +  +E+ + R    EE    E G+V   + E  ++++ G
Sbjct: 793 QGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEG 833



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 12/140 (8%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKR---EDEGEPGD-EGQLED 62
           + E   E EG+ E+    ++EG+ +EEE    EGK E EG+    E+EGE G+ EG+ E+
Sbjct: 826 REEEEEEGEGEEEEGEGEEEEGEGEEEEG---EGKGEEEGEEGEGEEEGEEGEGEGEEEE 882

Query: 63  -EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGT--- 118
            EG  E++G  EGE + +GEG+   + + E +    E +  E+    + + + + G    
Sbjct: 883 GEGEGEEEGEGEGE-EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEG 941

Query: 119 DDSPKDSQEDLQERHLSSEE 138
           +D   + +E+  E     EE
Sbjct: 942 EDGEGEGEEEEGEWEGEEEE 961



 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 6   NKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGS 65
           ++ E N E E   E+E    +E + D EE+ + EG    EGK E EGE  +  + ++EG 
Sbjct: 719 HQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEG----EGKEEGEGEEVEGEREKEEGE 774

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPA---------EDYVPRKAKRKTDR 116
           ++K+ R+  E K + EG      + E++ R  EK            E    R+ + +   
Sbjct: 775 RKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGE 834

Query: 117 GTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
           G ++  +  +E+ +      E    E G+    +EE
Sbjct: 835 GEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEE 870



 Score = 50.8 bits (120), Expect = 7e-07
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 5/147 (3%)

Query: 9    EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTE-CEGKREDEGEPGDEGQLEDEGSQE 67
            EG  E EG+  +    ++EG+ + EE+ + EG+ E  EG+ E+EGE G+  + E EG  E
Sbjct: 864  EGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGKGE 922

Query: 68   KQG-RSEGEG-KPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS 125
            ++G   EGEG + +GEG+     + E +    E    E+    + + + +   ++   + 
Sbjct: 923  EEGEEGEGEGEEEEGEGE-GEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEG 981

Query: 126  QEDLQERHLSSEEMMRECGDVSRAQEE 152
            +E+  E     EE   E  +    +EE
Sbjct: 982  EEEEGEGEGEEEEGEEEGEEEGEGEEE 1008



 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
            E+   + EG  E E + E EVE + EG+  E E  + EG+ E E +RE EGE G+E +  
Sbjct: 1001 EEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGE-EREKEGE-GEENRRN 1058

Query: 62   DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEK 99
             E  +E++G+ +  G+ + E +   + K  S+ + + K
Sbjct: 1059 REEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVK 1096



 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 7    KNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKT-----ECEGKREDEGEPGDEGQLE 61
            + EG  E E + E E E + EG  +EEE+ +VEG+      E EG+ E+  E G+E + E
Sbjct: 992  EEEGEEEGEEEGEGEEEGEGEG--EEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKE 1049

Query: 62   DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEK 99
             EG + ++ R E E   + EGK     + E++ +  E+
Sbjct: 1050 GEGEENRRNREEEE---EEEGKYQETGEEENERQDGEE 1084



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 1   MEKPYNKNEGNLENE---GKPEDEVEPDDEGKSDEEEKP----------DVEG--KTECE 45
           +E    K EG  + E   GK E   E  D+G+ +EEE            +VEG    E +
Sbjct: 764 VEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGK 823

Query: 46  GKREDEGEPG----DEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKR- 100
           G+RE+E E G    +EG+ E+E  + ++   EG+G+ +GE     +   E +    E+  
Sbjct: 824 GEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEG 883

Query: 101 --PAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
               E+    + + +   G  +   + + + +E     EE   E G+    +EE
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE-GEGEGEEEE 936



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 7/142 (4%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEE--EKPDVEGKTECEGKREDEGEPGDEGQ 59
           ++ + K +G  E E K  ++    +  +  EE  E+   EG+ E EG RE+E E   EG+
Sbjct: 699 KEEWKKRDGE-EQEQKEREQGHQKERNQEMEEGGEEEHGEGEEE-EGDREEEEEKEGEGK 756

Query: 60  LEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKR---KTDR 116
            E EG + +  R + EG+ + E +   + K E +    E    E     + K    + + 
Sbjct: 757 EEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEG 816

Query: 117 GTDDSPKDSQEDLQERHLSSEE 138
           G  +  K  +E+ +E     EE
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEE 838



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
           EK   + E   + +G+ +++ E +   + +  ++ +  G+ E     E+EG+  +E + E
Sbjct: 693 EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKE 752

Query: 62  DEGSQEKQGRS-EGE-GKPQGEGKPASQA-KPESQPRAAEKRPAEDYVPRKAKRKTDRGT 118
            EG +E +G   EGE  K +GE K   +A K E      ++   E+        + + G 
Sbjct: 753 GEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGG 812

Query: 119 DDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMG 160
           +    + +E   ER    EE   E  +    +EE   +++ G
Sbjct: 813 EVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEG 854



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 6/155 (3%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKR---EDEGEPGDEG 58
           E+   + EG  E EG+  +     +EG+  +EE+   E K E EG +   E+E   G  G
Sbjct: 747 EEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEG-RG 805

Query: 59  QLEDEGSQEKQGR-SEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRG 117
           + ++EG + + G   EG+G+ + E +     + E +    E    E+    K + + + G
Sbjct: 806 EEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEG 865

Query: 118 TDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
             +   +  E   E      E   E G+    +EE
Sbjct: 866 EGEEEGEEGEGEGEEEEGEGEGEEE-GEGEGEEEE 899



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 37/226 (16%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKRED----------- 50
           E+    NE N++  G  +++ E   +  +D+ E    EGK +  G+ ED           
Sbjct: 603 EQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVS--EGKAKSVGEAEDGPEGRGDGTCE 660

Query: 51  EGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPR---AAEKRPAEDYVP 107
           EG  G E   ++E  + ++ +  GE +  GEG+     K E + R     E++  E    
Sbjct: 661 EGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQ 720

Query: 108 RKAKRKTDRGTDDSPKDSQEDLQERHLSSE--------------EMMRECGDVSRAQEEL 153
           ++  ++ + G ++   + +E+  +R    E              E  RE  +  R +EE 
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER 780

Query: 154 RKKQKMGGFHWMQRD-VQDPFAPRGQRGVRG--VRGG----GRGQR 192
             K++ G     Q +  ++    RG+    G  V GG    G+G+R
Sbjct: 781 AGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGER 826


>gi|55749466 transcription elongation factor A (SII)-like 8 [Homo
           sapiens]
          Length = 117

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAE--KRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQ 130
           E EGKPQ   K       E  P+ AE   +P+E+ V ++A+     G +   +  +ED  
Sbjct: 7   ENEGKPQNMPKAEEDRPLEDVPQEAEGNPQPSEEGVSQEAEGNPRGGPNQPGQGFKEDTP 66

Query: 131 ERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFHWMQR 167
            RHL  EEM+R   ++ R +EE+R+ + K    HW QR
Sbjct: 67  VRHLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQR 104


>gi|23503247 transcription elongation factor A (SII)-like 8 [Homo
           sapiens]
          Length = 117

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAE--KRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQ 130
           E EGKPQ   K       E  P+ AE   +P+E+ V ++A+     G +   +  +ED  
Sbjct: 7   ENEGKPQNMPKAEEDRPLEDVPQEAEGNPQPSEEGVSQEAEGNPRGGPNQPGQGFKEDTP 66

Query: 131 ERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFHWMQR 167
            RHL  EEM+R   ++ R +EE+R+ + K    HW QR
Sbjct: 67  VRHLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQR 104


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)

Query: 1    MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
            +E P  + E   E+EG    E E + + +S+  E  D EG+ + E +  +  E  +E Q 
Sbjct: 2116 IEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQP 2175

Query: 61   EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQP--RAAEKRPAEDYV-PRKAKRKTDRG 117
            E EG +  +  +EGE +P+ EG  A +A+ E+QP     E   AE+   P     +T   
Sbjct: 2176 ELEGVEAPE--AEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEA 2233

Query: 118  TDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQE 151
              ++  +S+ + Q     S ++    G    A E
Sbjct: 2234 EGEAQPESEGETQGEKKGSPQVSLGDGQSEEASE 2267



 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 16/139 (11%)

Query: 13   ENEGKPEDEV------EPDDEGKSDEEEKPDVEGKT-ECEGKREDEGE----PGDEGQLE 61
            E + +PE EV      E + + +S++ E  +VE +T E EG+ + E E    P  EG+++
Sbjct: 1951 EGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQ 2010

Query: 62   DEGSQEKQGRSEG-EGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
             E  +E Q  S+G E +P+ EG+ A + + E+Q    + +P  D V      + +    +
Sbjct: 2011 -EAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAP---EAEEEAQE 2066

Query: 121  SPKDSQEDLQERHLSSEEM 139
            +  + QE   E H  SE++
Sbjct: 2067 AEGEVQEAEGEAHPESEDV 2085



 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)

Query: 9    EGNLENEGKPEDEVEPDDEG-----KSDEEEKPDVEG---KTECEGKREDEGEPGDEGQL 60
            EG ++   + E+E +P+ +G     KS+ EE  +VEG   KTE + + E +G    E + 
Sbjct: 2006 EGEMQ---EAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEE 2062

Query: 61   EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRA 96
            E + ++ +   +EGE  P+ E   A +A+ E+QP +
Sbjct: 2063 EAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPES 2098



 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 34/164 (20%)

Query: 1    MEKPYNKNEGNLENEG----KPEDEVEPDDEG----KSDEEEKPDVEGKTECEGKREDEG 52
            +E P  + E   E+E     + E EV+P+ EG    ++++E +P+ E     E + EDE 
Sbjct: 1874 VEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEP 1933

Query: 53   EP-GDEGQLEDEGSQEKQGRS------------EGEGKPQGEGKPASQAKPESQPRAAEK 99
            E  G E Q  +E +QE +G++            E E +P+ E   A + + E+Q    E 
Sbjct: 1934 ESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEA 1993

Query: 100  RPAEDYV------------PRKAKRKTDRGTDDSPKDSQEDLQE 131
            +P  + V              +A+ ++D G +  PK   E+ QE
Sbjct: 1994 QPESEDVEAPEAEGEMQEAEEEAQPESD-GVEAQPKSEGEEAQE 2036



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 45/195 (23%)

Query: 1    MEKPYNKNEGNLENEG--KPE-----DEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGE 53
            +E P  + E   E+EG   PE      E E + + +S++ E P+ EG+ + E +  +  E
Sbjct: 1835 IEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPE 1894

Query: 54   PGDEGQLEDEGSQ----EKQGR----------SEGEGKPQGEGKPASQAKPESQPRAAEK 99
               E Q E EG++    EK+ +          +EGE +P+ EG  A +A+  +Q    + 
Sbjct: 1895 AEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQT 1954

Query: 100  RPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKM 159
            +P  + +                 +SQE       + EE   E  DV   + E+  ++  
Sbjct: 1955 QPESEVI-----------------ESQE-------AEEEAQPESEDVEALEVEVETQEAE 1990

Query: 160  GGFHWMQRDVQDPFA 174
            G       DV+ P A
Sbjct: 1991 GEAQPESEDVEAPEA 2005



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 14/143 (9%)

Query: 1    MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
            +E    K EG+ + E    +  E ++E +  E E  + EG+   E +  D  E   E Q 
Sbjct: 2037 VEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQP 2096

Query: 61   EDEG---------SQEKQG----RSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVP 107
            E EG         +Q+ +G     +EGE +P+ EG  A +A+ E+QP  +E   A+D   
Sbjct: 2097 ESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPE-SEGVEAQDAEG 2155

Query: 108  RKAKRKTDRGTDDSPKDSQEDLQ 130
                        ++ +++Q +L+
Sbjct: 2156 EAQPESEGIEAQEAEEEAQPELE 2178



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Query: 13   ENEGKPEDEVEPDDEGKSDEEEKPDVEG----KTECEGKREDEG--EPGDEGQLEDEGSQ 66
            E EG+ + E E  +  +++ E +P++EG    + E E + E EG   P  EG+ + E   
Sbjct: 2184 EAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEG 2243

Query: 67   EKQGRSEGEGKPQ---GEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPK 123
            E QG  E +G PQ   G+G+  S+   ES     E RP     P         G+   P 
Sbjct: 2244 ETQG--EKKGSPQVSLGDGQ--SEEASESSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPS 2299

Query: 124  DSQ 126
             S+
Sbjct: 2300 SSR 2302



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 8    NEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQE 67
            +E NL+ E     + +P     ++  E P+ EG          E +P  EG    E   +
Sbjct: 1810 HEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEG----------EAQPESEGVEAPEAEGD 1859

Query: 68   KQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAE 103
             Q  +EGE +P+ E   A +A+ E+QP + +    E
Sbjct: 1860 AQ-EAEGEAQPESEDVEAPEAEGEAQPESEDVETPE 1894



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 7    KNEGNLENEG-KPEDEVEPDDEGKSDEE------EKPDVEGKTECEGKREDEGEPGDEGQ 59
            K E  L+ EG + E+  E + EG+ +EE      E+   EG  E EG + +E + G EG 
Sbjct: 1326 KTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQE-EGVQLEEVKEGPEGG 1384

Query: 60   LEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 119
            L+ E  +E  G  E EG P+ EG    Q   E+     +    +D V  +   +     +
Sbjct: 1385 LQGEALEE--GLKE-EGLPE-EGSVHGQELSEASSPDGKGSQEDDPVQEEEAGRASASAE 1440

Query: 120  DSPKDSQEDLQE--RHLSSEE 138
              P +  E+  E   HLS  +
Sbjct: 1441 PCPAEGTEEPTEPPSHLSETD 1461



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 10   GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
            G  E EG  E   E  + G      + +++G+    G ++     G EG    E   E Q
Sbjct: 1788 GEAEQEG--EGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQ 1845

Query: 70   GRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAE 103
              SEG   P+ EG  A +A+ E+QP + +    E
Sbjct: 1846 PESEGVEAPEAEG-DAQEAEGEAQPESEDVEAPE 1878



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 6/112 (5%)

Query: 1    MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL 60
            +E P  + E   E EG    E E + + + +  E P+ EG+ + E + E +GE     Q+
Sbjct: 2196 IEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQV 2255

Query: 61   E-DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAK 111
               +G  E+   S     P  E +P     P        +RP     P  ++
Sbjct: 2256 SLGDGQSEEASES---SSPVPEDRPTPPPSPGGD--TPHQRPGSQTGPSSSR 2302



 Score = 35.8 bits (81), Expect = 0.025
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 11/79 (13%)

Query: 13   ENEGKPEDEVEPDD----EGKSDEEEKPDVEGKTECEGKREDEG------EPGDEGQLED 62
            E EG  E+ V+ ++    EG  +E  + +   +TE EG++E+E       E G EG L++
Sbjct: 1311 EGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEG-LQE 1369

Query: 63   EGSQEKQGRSEGEGKPQGE 81
            EG Q ++ +   EG  QGE
Sbjct: 1370 EGVQLEEVKEGPEGGLQGE 1388



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 17/132 (12%)

Query: 13   ENEGKPEDEVEPDDEGKSDE---------EEKPDVEGKTECEGKREDEGEPGDEGQLEDE 63
            EN  + E ++E   EG   E         EE    EG  E   + E+  E   EGQ E+E
Sbjct: 1294 ENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEE 1353

Query: 64   GSQEKQGRSEGEGKPQGEGKPASQAK--PES--QPRAAEKRPAEDYVPRKAK---RKTDR 116
               E+   + GEG  Q EG    + K  PE   Q  A E+   E+ +P +     ++   
Sbjct: 1354 AQLEEIEETGGEGL-QEEGVQLEEVKEGPEGGLQGEALEEGLKEEGLPEEGSVHGQELSE 1412

Query: 117  GTDDSPKDSQED 128
             +    K SQED
Sbjct: 1413 ASSPDGKGSQED 1424



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 46   GKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKP------ASQAKPESQPRAAEK 99
            G R  E +PGD+  LE  G   + G+   EG P  + +P      +S   P+S     + 
Sbjct: 986  GLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQSGEGVPQG 1045

Query: 100  RPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMR 141
               E      A+   DR      + S   L  R  +S ++MR
Sbjct: 1046 AAPEGVSEAPAEAGADREAPAGCRVSLRALPGRVSASTQIMR 1087



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 19   EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEG--------QLE----DEGSQ 66
            EDE E D E +        +   T  E  + +E + G EG        QLE    +EG Q
Sbjct: 1273 EDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQ 1332

Query: 67   EKQGRSEGEGKPQGEGKPASQAKPE 91
            E+  + E   + +GEG+   +A+ E
Sbjct: 1333 EEGVQLEETKETEGEGQQEEEAQLE 1357



 Score = 28.9 bits (63), Expect = 3.0
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 20   DEVEPDDEGKSDEEEKPDVE--GKTECEGKREDE-GEPGDEGQLEDEGSQEKQ--GRSEG 74
            D +  + EGK+   E       G+ E EG+   E GE G +G   ++  Q +   G  + 
Sbjct: 1766 DAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQD 1825

Query: 75   EGKPQG-EGKPASQAKPESQPRA 96
             G+  G EG  A +A+ E+QP +
Sbjct: 1826 PGQSDGAEGIEAPEAEGEAQPES 1848


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEG-------KREDEGEPGDEGQ 59
           KNE   + E + +   E  + GK D++EK + +GK +  G       K +++G+ G++G+
Sbjct: 124 KNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGK 183

Query: 60  LEDEGSQEK-------QGRSE-GEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAK 111
              E  +EK       + R E G+GK   +GK     K        + +  ED   R+  
Sbjct: 184 GNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKK-----EGKDVKVKEDEKEREDG 238

Query: 112 RKTDRGTDDSPKDSQEDLQERHLSSEE 138
           ++ + G ++     +EDL+E     EE
Sbjct: 239 KEDEGGNEEEAGKEKEDLKEEEEGKEE 265



 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 9   EGNLEN---EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK--REDEGEPGDEGQLEDE 63
           E N+E+   +G  + E    +    +E++K D E + E +G+  +ED+ E G+E     +
Sbjct: 102 EENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEE-----D 156

Query: 64  GSQEKQGRSEGE-GKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSP 122
           G ++K G  +GE  K + +GK     K   +    +    ++   RK         D   
Sbjct: 157 GKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKE 216

Query: 123 KDSQEDLQERHLSSEEMMRECG--DVSRAQEELRKKQK 158
           K  +++ ++  +  +E  RE G  D    +EE  K+++
Sbjct: 217 KGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKE 254



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 2/105 (1%)

Query: 2   EKPYNKNEGNLENEGKP--EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQ 59
           E    K +G    +GK   ED  E  ++ K +E+ K   +GK   +GK + + + G + +
Sbjct: 168 EDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVK 227

Query: 60  LEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED 104
           ++++  + + G+ +  G  +  GK     K E + +  ++   +D
Sbjct: 228 VKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKEDD 272



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKRED----EGEPGD 56
           +E+ YN+N  N    G+ +    P  E +  E ++ ++E  TE  G++++    E +  +
Sbjct: 72  VEEDYNENAKN----GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEE 127

Query: 57  EGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDR 116
           E Q EDE  Q ++    G+     +G+   +       +  + +  ED      K +  +
Sbjct: 128 EDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKED----GKKGEDGK 183

Query: 117 GTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGG 161
           G  +  K+  ED +E     EE  +E GD    ++   K  K  G
Sbjct: 184 GNGEDGKEKGEDEKE-----EEDRKETGDGKENEDGKEKGDKKEG 223



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 7   KNEGNLENEGKPED---EVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDE 63
           K E   E E + E    +   D + K D++E  DV+ K E E +RED  E  DEG  E+E
Sbjct: 192 KGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK-EDEKEREDGKE--DEGGNEEE 248

Query: 64  GSQEKQG-RSEGEGKPQGEGKPASQAKPESQ 93
             +EK+  + E EGK + E K     K E Q
Sbjct: 249 AGKEKEDLKEEEEGKEEDEIKEDDGKKEEPQ 279



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 7/71 (9%)

Query: 2   EKPYNKNEGNLENEGKP----EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDE 57
           E    K +G+ + EGK     EDE E +D GK DE    +  GK + + K E+EG+  DE
Sbjct: 210 ENEDGKEKGD-KKEGKDVKVKEDEKERED-GKEDEGGNEEEAGKEKEDLKEEEEGKEEDE 267

Query: 58  GQLEDEGSQEK 68
            + ED+G +E+
Sbjct: 268 IK-EDDGKKEE 277



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 15  EGKPEDEVEPDDEGKSDEE---EKPDVEGKTECEGKREDEGEPGDEGQLEDEGS 65
           E + E E   +DEG ++EE   EK D+  K E EGK EDE +  D+G+ E+  S
Sbjct: 230 EDEKEREDGKEDEGGNEEEAGKEKEDL--KEEEEGKEEDEIKE-DDGKKEEPQS 280


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 5/145 (3%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRS 72
           E++   EDE + +DE + ++E +P            EDE +  DE   +D+  +E     
Sbjct: 149 EDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEE 208

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQER 132
           E       +GK A++  P      AE    ED          D   DD   D ++D +E 
Sbjct: 209 EAMETTPAKGKKAAKVVPVKAKNVAED---EDEEEDDEDEDDDDDEDDEDDDDEDDEEEE 265

Query: 133 HLSSEEMMRECGDVSRAQEELRKKQ 157
               EE ++E     + ++E+ K++
Sbjct: 266 EEEEEEPVKEA--PGKRKKEMAKQK 288



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 21/123 (17%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKR----------------EDEGEPGD 56
           E+E   +DE + DD+   +++ + +    T  +GK+                ++E +  D
Sbjct: 185 EDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 244

Query: 57  EGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDR 116
           E   +DE  ++     + E + + E +P  +A     P   +K  A+     +AK++   
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEA-----PGKRKKEMAKQKAAPEAKKQKVE 299

Query: 117 GTD 119
           GT+
Sbjct: 300 GTE 302



 Score = 34.7 bits (78), Expect = 0.056
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 18/125 (14%)

Query: 4   PYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKT------------------ECE 45
           P +++E + ++E   +D+ + +D+ + +  E    +GK                   E +
Sbjct: 182 PASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEED 241

Query: 46  GKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDY 105
            + ED+ +  D+   +DE  +E++   E E   +  GK   +   +     A+K+  E  
Sbjct: 242 DEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGT 301

Query: 106 VPRKA 110
            P  A
Sbjct: 302 EPTTA 306



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDE 51
           E+  +++E + ++E   +D+ E D+E + +EEE+P      E  GKR+ E
Sbjct: 238 EEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEP----VKEAPGKRKKE 283


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 4   PYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDE 63
           P    EG  + E + + E E + E ++ EE + + E ++E E + E+E E   + + E++
Sbjct: 69  PPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEED 128

Query: 64  GSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRK-TDRGTDDSP 122
             +E +   E E +   + +  S+A+ E++  +      E    R AKRK  D G D S 
Sbjct: 129 SEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLST 188

Query: 123 KDSQEDLQ----ERHLSSEEMMRECGDVSRAQEELRKKQKMG 160
              QED Q       +       +   +  A EELR K   G
Sbjct: 189 Y-CQEDRQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGG 229



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 2   EKPYNKNEGNLENEGKPEDEV--EPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQ 59
           E+  ++ E   E E + E+E   E D+E + D EE+ + E ++E E   ++EGE   EG+
Sbjct: 97  EESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGE 156

Query: 60  LEDEGSQEKQGRSEGE 75
            E E   + +   E E
Sbjct: 157 TEAESEFDPEIEMEAE 172



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 5/136 (3%)

Query: 20  DEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLED--EGSQEKQGRSEGEGK 77
           DE EPD+   ++E  +    G   C    E   +      L +   GSQ     ++GEG 
Sbjct: 19  DECEPDEAPGAEEVCREC--GFCYCRRHAEAHRQKFLSHHLAEYVHGSQAWTPPADGEGA 76

Query: 78  PQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT-DRGTDDSPKDSQEDLQERHLSS 136
            + E +   + + E +  A E+  +E+    + + +T +   D+S ++S+ED +E     
Sbjct: 77  GKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDE 136

Query: 137 EEMMRECGDVSRAQEE 152
           +E   E  +    + E
Sbjct: 137 QESEAEEDNQEEGESE 152



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKRE 49
           E+  ++ E   E + + E E E + E +++ E  P++E + E   KR+
Sbjct: 131 EEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRK 178


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 9   EGNLENEGKPED----EVEPDDEGKSDEEEK-PDVEGKTECEGKREDEGEPGDEGQLEDE 63
           EG    EG+ E+    E +P+ EG+++ + K  + E + E EGK ++EGE  DEG++  E
Sbjct: 760 EGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGE--DEGEIHAE 817

Query: 64  GSQEKQGRSEGEGK---PQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
             + K    E E +    +  G+  +  K       ++   +E+    + +++ +   ++
Sbjct: 818 DGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEE 877

Query: 121 SPKDSQEDLQERHLSSEE 138
             ++ +E+ +E    +EE
Sbjct: 878 QEEEEEEEEEEEEKGNEE 895



 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 41/183 (22%)

Query: 15  EGKPEDEVE-----------PDDEGKSDEEEKPD-VEGKTECEGKRE---DEGEPGDEGQ 59
           E KPE+E             P  + K D++E P   E   E E   E   +EGE   EG+
Sbjct: 709 ESKPEEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAEAESTGEMPGEEGETAGEGE 768

Query: 60  LEDEGSQEKQGRSEGEGKPQG-----------EGKPASQAKPESQPRA------------ 96
            E++   E Q   EGE + QG           EGK  ++ + E +  A            
Sbjct: 769 TEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGET 828

Query: 97  -AEKRPAEDYVPRKAKRK--TDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEEL 153
            +++  AE++   K   K   D G  D     +E+ +E     EE   E  +    +EE 
Sbjct: 829 ESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEE 888

Query: 154 RKK 156
            +K
Sbjct: 889 EEK 891



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 20/112 (17%)

Query: 6   NKNEGNLENEGKPEDEVEPDD---EGKSDEEEKPDVEGKTECEGKREDEG---------- 52
           N+ EG  +NEG+ E E+  +D   +G   E E  ++  +   E K +++G          
Sbjct: 798 NEAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGG 857

Query: 53  -------EPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAA 97
                  E  ++ + E+E  QE++   E E + +G  +P S   PE++ + A
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQA 909



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 18/124 (14%)

Query: 7   KNEGNLENEGKPED-EVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLED--- 62
           + EG  E +GK E+ E E + EGK D       EG+ E E   ED    G+EG+ E    
Sbjct: 780 EGEGETETQGKGEECEDENEAEGKGDN------EGEDEGEIHAEDGEMKGNEGETESQEL 833

Query: 63  ------EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDR 116
                 E   +++G  +G G   G+ +   + + E +    E+   E+    + + + ++
Sbjct: 834 SAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEE--EEEEEEEEEK 891

Query: 117 GTDD 120
           G ++
Sbjct: 892 GNEE 895


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 19  EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGE-PGDEGQLEDEGSQEKQGRSEGEGK 77
           E E+E   EGK + E +   E +   + KRE E E   + G+ E +G ++K+ R   + +
Sbjct: 42  EREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR 101

Query: 78  PQGEGKPASQ----AKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERH 133
            + E K   +     K E + R    +  ++   ++ +++ +R   +  K+ +E  +ER 
Sbjct: 102 REKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERER- 160

Query: 134 LSSEEMMRECGDVSRAQEELRKKQK 158
              E   RE   V   +EE ++K++
Sbjct: 161 --KERKKRERKQVGEKEEERKEKER 183



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSD-EEEKPDVEGKTECEG------------KREDEGE 53
           + EG  E E + + E    ++ K + E+E+    GK E +G            +RE E +
Sbjct: 48  RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK 107

Query: 54  PGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRK 113
            G+E +   +  ++++GR+  EGK +   +   + + + + R  E+R  E    RK ++K
Sbjct: 108 EGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKER--ERKERKK 165

Query: 114 TDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
            +R      ++ +++ + +     E  R+     R ++E R+++K
Sbjct: 166 RERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210



 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 9   EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
           E   E E + E + E + E K +  E+   + + E E KRE  G+   +G+ + E  + K
Sbjct: 40  EREREIETRKEGKKERESERKKERREREKRKREREKERKRE-RGKKEKKGERKKEERERK 98

Query: 69  QGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQED 128
           + R E E K +GE K   + K E + R    +  ++   ++ +++ +R   +  K+ +E 
Sbjct: 99  KRRREKENK-EGEEKE-KRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREK 156

Query: 129 LQERHLSSEEMMRECGDVSRAQEEL-RKKQK 158
            +ER    +   ++ G+    ++E  RK++K
Sbjct: 157 ERERKERKKRERKQVGEKEEERKEKERKERK 187



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 28  GKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG---RSEGEGKPQGEGKP 84
           G   E  + + E +T  EGK+E E E   E +  ++  +E++    R  G+ + +GE K 
Sbjct: 33  GWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKK 92

Query: 85  ASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECG 144
             + + + + R  E +  E+   RK K K +RG   S +  + + +E     E   RE  
Sbjct: 93  EERERKKRR-REKENKEGEEKEKRKKKEKKERGR-TSKEGKERERKEERKREERKERERK 150

Query: 145 DVSRAQEELRKKQK 158
              R +E  RK++K
Sbjct: 151 KEEREKERERKERK 164



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 18/173 (10%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGE------PG 55
           EK   +  G  E +G+ + E   + E K    EK + EG+ + + K++++ E       G
Sbjct: 74  EKERKRERGKKEKKGERKKE---ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEG 130

Query: 56  DEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTD 115
            E + ++E  +E++   E + + + + +   + K   + +  EK        RK ++K +
Sbjct: 131 KERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRE 190

Query: 116 RGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRD 168
           R   +  K+ +   +ER    +E  ++       +E  +++QK    +W +++
Sbjct: 191 RNRKERKKERER--KERRERKKERKKK-------EERKKERQKDRQTNWREKE 234



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK--------REDEGEPGDEG 58
           K E   +   + ++  E +++ K  ++EK +  G+T  EGK        + +E +  +  
Sbjct: 92  KEERERKKRRREKENKEGEEKEKRKKKEKKE-RGRTSKEGKERERKEERKREERKERERK 150

Query: 59  QLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGT 118
           + E E  +E++ R + E K  GE +   + K   + +  E+   E    R+ K + +R  
Sbjct: 151 KEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210

Query: 119 DDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK 155
           +   K+ ++  +ER    +   RE     R ++E +K
Sbjct: 211 ERKKKEERK--KERQKDRQTNWREKERGKRERKERKK 245


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 6   NKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGS 65
           +K +G L +E + E+E E ++E + DEEE+ + E + E E + E+E E  +E + E+E +
Sbjct: 249 SKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308

Query: 66  -----QEKQGRSEGEGKPQGEGKPASQAKPE 91
                QE    +  +  P+  G  +   KPE
Sbjct: 309 PDVIFQEDTSHTSAQKAPELRGPESPSPKPE 339



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 36/190 (18%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 8   NEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQE 67
           +E + + +G    E E ++E + +EEE+ D E + E E + E+E E  +E + E+E  +E
Sbjct: 245 SEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304

Query: 68  KQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQE 127
           ++   +   +       A +A     P +   +P    +    + ++D   D+     + 
Sbjct: 305 EEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVI---VEVRSDDDKDEDTHSRKS 361

Query: 128 DLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGG 187
            + +     + M R  G++   ++ +  K +        R V +P  P  ++   G+   
Sbjct: 362 TVTDESEMQDMMTR--GNLGLLEQAIALKAE------QVRTVCEPGCPPAEQSQLGLGEP 413

Query: 188 GRGQRGLHDI 197
           G+  + L  +
Sbjct: 414 GKAAKPLDTV 423


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 16/108 (14%)

Query: 7   KNEGNLENEGKPEDEVEP-----------DDEGKSDEEEKPDVEGKTECEGKREDEGEPG 55
           K E   E E +PE E E              E K +E EK + EG+ E E   EDEG   
Sbjct: 488 KKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEE--EEDEGAKS 545

Query: 56  DEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAE 103
           D+ +   EG  EK+G SE E   Q EG+  ++A+ E      EK+  E
Sbjct: 546 DQAE---EGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEE 590



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 21/120 (17%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ--G 70
           E EG+ E+E     EG+ +EEE        E EG + D+ E   EG  E EGS EK+   
Sbjct: 522 EEEGEKEEE-----EGQEEEEE--------EDEGAKSDQAE---EGGSEKEGSSEKEEGE 565

Query: 71  RSEGEGKPQGEGKPASQAKPES--QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQED 128
           + EGE + + EG+ A +AK E   + ++ E    E+ V      K ++     PK   E+
Sbjct: 566 QEEGETEAEAEGEEA-EAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEE 624



 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEK--PDVEGKTECEGKREDEGEPGDEGQLED-E 63
           + EG  E E   E+E E D+  KSD+ E+   + EG +E E   ++EGE   E + E+ E
Sbjct: 522 EEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAE 581

Query: 64  GSQEK--QGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED--YVPRKAKRKTDRGTD 119
             +EK  + +SE     +     A   KPE       K P E+    P       ++G  
Sbjct: 582 AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKS 641

Query: 120 DSPKDSQED 128
             PK   E+
Sbjct: 642 PVPKSPVEE 650



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 19/118 (16%)

Query: 21  EVEPDDEGK----SDEEEKPDVEGKTECEG--------KRED---EGEPGDEGQLEDEGS 65
           E E  +EGK      E+EK   EG +E EG        ++ED    GE   + ++E E  
Sbjct: 758 EKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 817

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPK 123
           ++  GR E +G             P  + +  +K   +  V +  ++ T  G D + K
Sbjct: 818 EKGSGREEEKGVVTN----GLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATK 871



 Score = 28.9 bits (63), Expect = 3.0
 Identities = 21/66 (31%), Positives = 29/66 (43%)

Query: 11  NLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG 70
           N E EGK E E E  ++G   EEEK  V    +     E +G    E ++    + EK  
Sbjct: 803 NGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKIT 862

Query: 71  RSEGEG 76
              G+G
Sbjct: 863 SEGGDG 868


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 16/108 (14%)

Query: 7   KNEGNLENEGKPEDEVEP-----------DDEGKSDEEEKPDVEGKTECEGKREDEGEPG 55
           K E   E E +PE E E              E K +E EK + EG+ E E   EDEG   
Sbjct: 112 KKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEE--EEDEGAKS 169

Query: 56  DEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAE 103
           D+ +   EG  EK+G SE E   Q EG+  ++A+ E      EK+  E
Sbjct: 170 DQAE---EGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEE 214



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 21/120 (17%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ--G 70
           E EG+ E+E     EG+ +EEE        E EG + D+ E   EG  E EGS EK+   
Sbjct: 146 EEEGEKEEE-----EGQEEEEE--------EDEGAKSDQAE---EGGSEKEGSSEKEEGE 189

Query: 71  RSEGEGKPQGEGKPASQAKPES--QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQED 128
           + EGE + + EG+ A +AK E   + ++ E    E+ V      K ++     PK   E+
Sbjct: 190 QEEGETEAEAEGEEA-EAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEE 248



 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEK--PDVEGKTECEGKREDEGEPGDEGQLED-E 63
           + EG  E E   E+E E D+  KSD+ E+   + EG +E E   ++EGE   E + E+ E
Sbjct: 146 EEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAE 205

Query: 64  GSQEK--QGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED--YVPRKAKRKTDRGTD 119
             +EK  + +SE     +     A   KPE       K P E+    P       ++G  
Sbjct: 206 AKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKS 265

Query: 120 DSPKDSQED 128
             PK   E+
Sbjct: 266 PVPKSPVEE 274



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 19/118 (16%)

Query: 21  EVEPDDEGK----SDEEEKPDVEGKTECEG--------KRED---EGEPGDEGQLEDEGS 65
           E E  +EGK      E+EK   EG +E EG        ++ED    GE   + ++E E  
Sbjct: 382 EKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 441

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPK 123
           ++  GR E +G             P  + +  +K   +  V +  ++ T  G D + K
Sbjct: 442 EKGSGREEEKGVVTN----GLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATK 495



 Score = 28.9 bits (63), Expect = 3.0
 Identities = 21/66 (31%), Positives = 29/66 (43%)

Query: 11  NLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG 70
           N E EGK E E E  ++G   EEEK  V    +     E +G    E ++    + EK  
Sbjct: 427 NGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKIT 486

Query: 71  RSEGEG 76
              G+G
Sbjct: 487 SEGGDG 492


>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
           [Homo sapiens]
          Length = 666

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 26/205 (12%)

Query: 6   NKNEGNLENEGKPEDEVEPDDEGKSDEE-----EKPDVEGKTECEGKREDEGEPG-DEGQ 59
           +++EG+  + G    E E  ++  SD+E     +K D     + +   ++E   G DE +
Sbjct: 116 DEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDK 175

Query: 60  LEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPA-------------EDYV 106
           L++    EK   ++ E +PQ       Q   E +  + ++RP              E+  
Sbjct: 176 LQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQP 235

Query: 107 PRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRA----QEELRKKQKMGGF 162
               + K     D+ P+ S E  + RH   EE      + +R      E LR K+K    
Sbjct: 236 QLSDEEKMQNSDDERPQASDE--EHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAIA 293

Query: 163 HWMQRDVQDPFAPRGQRGVRGVRGG 187
              + D  D   P+   G   + GG
Sbjct: 294 SDSEAD-SDTEVPKDNSGTMDLFGG 317



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGK---SDEEEKPDVEGKTECEGKREDEGEPGDEG 58
           E+    +E  L+N          DD+ K   +D+EE+P +      +   E++    DE 
Sbjct: 166 ERAQGSDEDKLQNS---------DDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDER 216

Query: 59  QLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAA--EKRPAEDYVPRKAKRKTDR 116
            +  +   EKQ  S+ E +PQ   +   Q   + +P+A+  E R ++D   +  K ++ R
Sbjct: 217 PVASDNDDEKQ-NSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESAR 275

Query: 117 GTD----------------DSPKDSQEDLQERHLSSEEMMRECGDVSRAQE 151
           G+D                DS  DS  ++ + +  + ++     D+S   +
Sbjct: 276 GSDSEDEVLRMKRKNAIASDSEADSDTEVPKDNSGTMDLFGGADDISSGSD 326



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 14  NEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG-RS 72
           ++   E E +  D G   + ++ +    +   G   D+ E GD GQ     ++E  G  S
Sbjct: 10  SDADSEAERKDSDSGSDSDSDQENAASGSNASGSESDQDERGDSGQ---PSNKELFGDDS 66

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRK--TDRGTDDSPKDSQEDLQ 130
           E EG     G      + +++  A+E+   ED  P    +   ++   DD  +  + D  
Sbjct: 67  EDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGG 126

Query: 131 ERHLSSE 137
             H  +E
Sbjct: 127 SHHSEAE 133



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 14/139 (10%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
           E+  N++E +  ++ +  D  + D    S+     + EG     G    E E  ++   +
Sbjct: 82  ERSDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSD 141

Query: 62  DE--GSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 119
           DE  G ++K  +S+ E     + +  +Q   E            D +      +  + TD
Sbjct: 142 DEKWGREDKSDQSDDEKIQNSDDEERAQGSDE------------DKLQNSDDDEKMQNTD 189

Query: 120 DSPKDSQEDLQERHLSSEE 138
           D  +    D + + LS EE
Sbjct: 190 DEERPQLSDDERQQLSEEE 208



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 37/176 (21%), Positives = 57/176 (32%), Gaps = 33/176 (18%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDE---------- 51
           E+P   +E  ++N      +   ++   SD+EE+ D + ++      EDE          
Sbjct: 233 EQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAI 292

Query: 52  ----------GEPGDEGQLED--EGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEK 99
                       P D     D   G+ +    S+GE KP   G+P  +       +  E 
Sbjct: 293 ASDSEADSDTEVPKDNSGTMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQQEEEP 352

Query: 100 RPAEDYVPRKAKRKTDRGTD-----------DSPKDSQEDLQERHLSSEEMMRECG 144
            P         K  TD G D             P+       E     EEM+ E G
Sbjct: 353 IPETRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEG 408



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 30  SDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGE-GKPASQA 88
           +D E+    +  +E E K  D G   D  Q E+  S      SE +   +G+ G+P+++ 
Sbjct: 2   ADMEDLFGSDADSEAERKDSDSGSDSDSDQ-ENAASGSNASGSESDQDERGDSGQPSNKE 60

Query: 89  --KPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSE-------EM 139
               +S+   A      D    ++  +++       +D+     ++H  SE       E 
Sbjct: 61  LFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEG 120

Query: 140 MRECGDVSRAQEELRKKQKMGGFHWMQRDVQD 171
            R  G    ++ E  +K       W + D  D
Sbjct: 121 HRSDGGSHHSEAEGSEKAHSDDEKWGREDKSD 152


>gi|55743140 WW domain binding protein 5 [Homo sapiens]
          Length = 104

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS 125
           Q+ +G+ E E +P+ E +P  + KPE + +  E+         KAK         S ++ 
Sbjct: 5   QKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--------KAKGTFRERLIQSLQEF 56

Query: 126 QEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHW 164
           +ED+  RHLS+E+M RE   V    E  R + K+    W
Sbjct: 57  KEDIHNRHLSNEDMFRE---VDEIDEIRRVRNKLIVMRW 92



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 3  KPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTE 43
          K   K EG  ENE +P+ E EP  E K +EEEK + E K +
Sbjct: 2  KSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAK 42



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 18/33 (54%), Positives = 21/33 (63%)

Query: 15 EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK 47
          EGKPE+E EP  E +   EEKP+ E K E E K
Sbjct: 8  EGKPENESEPKHEEEPKPEEKPEEEEKLEEEAK 40


>gi|55743147 WW domain binding protein 5 [Homo sapiens]
          Length = 104

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS 125
           Q+ +G+ E E +P+ E +P  + KPE + +  E+         KAK         S ++ 
Sbjct: 5   QKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--------KAKGTFRERLIQSLQEF 56

Query: 126 QEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHW 164
           +ED+  RHLS+E+M RE   V    E  R + K+    W
Sbjct: 57  KEDIHNRHLSNEDMFRE---VDEIDEIRRVRNKLIVMRW 92



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 3  KPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTE 43
          K   K EG  ENE +P+ E EP  E K +EEEK + E K +
Sbjct: 2  KSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAK 42



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 18/33 (54%), Positives = 21/33 (63%)

Query: 15 EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK 47
          EGKPE+E EP  E +   EEKP+ E K E E K
Sbjct: 8  EGKPENESEPKHEEEPKPEEKPEEEEKLEEEAK 40


>gi|10047100 WW domain binding protein 5 [Homo sapiens]
          Length = 104

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS 125
           Q+ +G+ E E +P+ E +P  + KPE + +  E+         KAK         S ++ 
Sbjct: 5   QKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--------KAKGTFRERLIQSLQEF 56

Query: 126 QEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHW 164
           +ED+  RHLS+E+M RE   V    E  R + K+    W
Sbjct: 57  KEDIHNRHLSNEDMFRE---VDEIDEIRRVRNKLIVMRW 92



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 3  KPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTE 43
          K   K EG  ENE +P+ E EP  E K +EEEK + E K +
Sbjct: 2  KSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAK 42



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 18/33 (54%), Positives = 21/33 (63%)

Query: 15 EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK 47
          EGKPE+E EP  E +   EEKP+ E K E E K
Sbjct: 8  EGKPENESEPKHEEEPKPEEKPEEEEKLEEEAK 40


>gi|55743145 WW domain binding protein 5 [Homo sapiens]
          Length = 104

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 66  QEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS 125
           Q+ +G+ E E +P+ E +P  + KPE + +  E+         KAK         S ++ 
Sbjct: 5   QKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--------KAKGTFRERLIQSLQEF 56

Query: 126 QEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHW 164
           +ED+  RHLS+E+M RE   V    E  R + K+    W
Sbjct: 57  KEDIHNRHLSNEDMFRE---VDEIDEIRRVRNKLIVMRW 92



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 3  KPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTE 43
          K   K EG  ENE +P+ E EP  E K +EEEK + E K +
Sbjct: 2  KSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAK 42



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 18/33 (54%), Positives = 21/33 (63%)

Query: 15 EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK 47
          EGKPE+E EP  E +   EEKP+ E K E E K
Sbjct: 8  EGKPENESEPKHEEEPKPEEKPEEEEKLEEEAK 40


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 15   EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEG 74
            +G P     P   GK  E+ KP + GK    G+  D GE G +G+  D G+  ++GR   
Sbjct: 1817 QGLPGPSGPPGLPGKPGEDGKPGLNGK---NGEPGDPGEDGRKGEKGDSGASGREGRDGP 1873

Query: 75   EGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHL 134
            +G+    G    Q  P               VP     K DRG   S K  Q    ER L
Sbjct: 1874 KGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGS-KGEQGLPGERGL 1932

Query: 135  SSE--------EMMRECGDVSRAQEELRK--KQKMGGFHWMQRDVQDPFAPRGQRGVRGV 184
              E         ++   G  + A  E+ +   +  G F  +    + P    G++G  G 
Sbjct: 1933 RGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGK 1992

Query: 185  RG--GGRGQRGL 194
             G  G  G+RGL
Sbjct: 1993 EGPIGFPGERGL 2004



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 52/196 (26%), Positives = 72/196 (36%), Gaps = 23/196 (11%)

Query: 16   GKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGE 75
            G P  + +P D G      +    G +   G++ D G PG  G +   G   + G    E
Sbjct: 1583 GDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDE 1642

Query: 76   GKPQGEGKPAS------QAKPESQPRAAEK----RPAED---YVPRKAKRKTDRGTDDSP 122
            G P   G P        +  P  +    EK     P ED     P  +  K DRG    P
Sbjct: 1643 GPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPP 1702

Query: 123  KDSQEDLQERHLSSEEMMRECGDV-SRAQEELRKKQKMGGFHWM--QRDVQDPFAPRGQR 179
                     R + +    RE G+   R QE  R  +   G      +R ++    P G +
Sbjct: 1703 GP-----PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQ 1757

Query: 180  GVRGVRG--GGRGQRG 193
            G  GVRG  G +G RG
Sbjct: 1758 GDPGVRGPAGEKGDRG 1773



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 51/197 (25%), Positives = 73/197 (37%), Gaps = 26/197 (13%)

Query: 10   GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
            G   +EG P D   P   G+      P V G     G++ D+G+PG++G+    GS   +
Sbjct: 1637 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPV---GEKGDQGDPGEDGRNGSPGSSGPK 1693

Query: 70   GRSEGEGKPQGEGK-----PASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD--SP 122
            G     G P   G+     P ++ K E   R  E        P       +RG +    P
Sbjct: 1694 GDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGP 1753

Query: 123  KDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVR 182
               Q D   R  + E+     GD  R    L  +  + G    +     P  P G  G  
Sbjct: 1754 PGPQGDPGVRGPAGEK-----GD--RGPPGLDGRSGLDG----KPGAAGPSGPNGAAGKA 1802

Query: 183  GVRG-----GGRGQRGL 194
            G  G     G RG++GL
Sbjct: 1803 GDPGRDGLPGLRGEQGL 1819



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 17/185 (9%)

Query: 16   GKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGE 75
            G+  D   P  +G+S  + KP   G +   G     G+PG +G     G + +QG     
Sbjct: 1767 GEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGL---PGLRGEQGLPGPS 1823

Query: 76   GKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLS 135
            G P   GKP    KP    +  E  P +   P +  RK ++G   +      D  +    
Sbjct: 1824 GPPGLPGKPGEDGKPGLNGKNGE--PGD---PGEDGRKGEKGDSGASGREGRDGPKGERG 1878

Query: 136  SEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG--GGRGQRG 193
            +  ++   G            Q   G       V     P+G RG  G +G  G  G+RG
Sbjct: 1879 APGILGPQGPPGLPGPVGPPGQGFPG-------VPGGTGPKGDRGETGSKGEQGLPGERG 1931

Query: 194  LHDIP 198
            L   P
Sbjct: 1932 LRGEP 1936



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 2/102 (1%)

Query: 24   PDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGK 83
            P   G + E  KP + G     G   + G PG+ G+  ++G + +QGR    G P   G 
Sbjct: 2027 PGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086

Query: 84   PASQAKPESQPRAAEKRPAEDYVP--RKAKRKTDRGTDDSPK 123
            P       S          E   P  + AK +     D  PK
Sbjct: 2087 PGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPK 2128



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 47/180 (26%), Positives = 66/180 (36%), Gaps = 21/180 (11%)

Query: 15   EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEG------QLEDEGSQEK 68
            +G+P D  +    G   +   P   G+   EG R   G  GD G      +  D G    
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 69   QGRSEGEGKPQGEGKPASQAKPESQPRAAEKR--PAEDYVPRKAKRKTDRGTDDSPKDSQ 126
             GRS  +GKP   G       P     AA K   P  D +P     +   G    P    
Sbjct: 1778 DGRSGLDGKPGAAG-------PSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPG 1830

Query: 127  EDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG 186
            +  ++          E GD     E+ RK +K G      R+ +D   P+G+RG  G+ G
Sbjct: 1831 KPGEDGKPGLNGKNGEPGDPG---EDGRKGEK-GDSGASGREGRD--GPKGERGAPGILG 1884



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 18   PEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGK 77
            P+  V+    G S E+  P ++G     G   D+G  GD G    +G + + G    +G 
Sbjct: 2092 PKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGN 2151

Query: 78   PQGEGKPASQAKPESQP 94
            P   G+    A PE +P
Sbjct: 2152 PGLPGE-RGMAGPEGKP 2167



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 24   PDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGK 83
            P   G   +  +    G    +G R D G+PGD+G   + G +   G     G    +G+
Sbjct: 2529 PGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQ 2588

Query: 84   PASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMR-E 142
            P +   P   P +    P +D VP     K D G           +  R L  E  ++  
Sbjct: 2589 PGAAGIP-GDPGS----PGKDGVPGIRGEKGDVGF----------MGPRGLKGERGVKGA 2633

Query: 143  CG-DVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG--GGRGQRGLHDIP 198
            CG D  +  +         G    + ++ +P  P GQ G  G  G  G +G RG    P
Sbjct: 2634 CGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVP-GQSGAPGKEGLIGPKGDRGFDGQP 2691



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 7/98 (7%)

Query: 26   DEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGE---G 82
            D+G+  E   P + G     G     G PG  G +   G +  QG+ +GE  P GE   G
Sbjct: 2696 DQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQ-KGERGPPGERVVG 2754

Query: 83   KPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
             P     P  +       PA    PR  K +     DD
Sbjct: 2755 APGVPGAPGERGEQGRPGPAG---PRGEKGEAALTEDD 2789



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 15   EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEG 74
            +G+P     P   G       P ++G     G R D GE G  G   + G+  +    EG
Sbjct: 1304 DGRPGS---PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG 1360

Query: 75   EGKPQGEGKPASQAKPESQPRAAEKRP-AEDYVPRKAKR--KTDRGTDDSP 122
             G P  +G P     P  +    +  P     +P  A +  K DRG    P
Sbjct: 1361 PGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPP 1411



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 10   GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
            G +   G+  +  E  DEG   +   P   G+    G     G  G++G   D G   + 
Sbjct: 1625 GPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRN 1684

Query: 70   GRSEGEGKPQGE-GKPASQAKP----ESQPRAAEK 99
            G S G   P+G+ G+P     P    ++ P A EK
Sbjct: 1685 G-SPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREK 1718



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 5/109 (4%)

Query: 9    EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
            +G   ++G+      P   G   E  +P V G++   GK    G  GD G     G +  
Sbjct: 2637 DGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGD 2696

Query: 69   QGRSEGEGKPQGEGKPA-----SQAKPESQPRAAEKRPAEDYVPRKAKR 112
            QG     G P   G P        A P   P +   R  E    +K +R
Sbjct: 2697 QGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGER 2745



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 49/191 (25%), Positives = 68/191 (35%), Gaps = 17/191 (8%)

Query: 18   PEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGK 77
            P  E     +G S E+  P  EG     G+R  +G+ G      D G Q   G + GE  
Sbjct: 1972 PVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRG------DPGPQGPPGLALGERG 2025

Query: 78   PQG----EGKPASQAKPESQPRAA----EKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDL 129
            P G     G+P     P    RA       RP E     +   + ++G D  P       
Sbjct: 2026 PPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPG 2085

Query: 130  QERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG--G 187
                   +  + E G     ++     +   G      D Q P   RG  G++G RG  G
Sbjct: 2086 PPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGD-QGPKGDRGVPGIKGDRGEPG 2144

Query: 188  GRGQRGLHDIP 198
             RGQ G   +P
Sbjct: 2145 PRGQDGNPGLP 2155



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 9/57 (15%)

Query: 26   DEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEG 82
            D+G   +   P ++G         D GEPG  GQ  + G   ++G +  EGKP  +G
Sbjct: 2124 DQGPKGDRGVPGIKG---------DRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQG 2171



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/61 (31%), Positives = 26/61 (42%)

Query: 24   PDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGK 83
            P + G +  E KP ++G     G     G+PG  G     G    QG S  +G+P   G 
Sbjct: 2155 PGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP 2214

Query: 84   P 84
            P
Sbjct: 2215 P 2215



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 19/177 (10%)

Query: 16   GKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGE-----PGDEGQLEDEGSQEKQG 70
            G  E  + P + G       P  +G     GK+ ++G+     PG  GQ    G Q  +G
Sbjct: 1412 GPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRG 1471

Query: 71   RSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDY-VPRKAKRKTDRGTDDSPKDSQEDL 129
                 G     G P    +   +       PA    +P  A R   +G +  P  +    
Sbjct: 1472 PPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQ- 1530

Query: 130  QERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG 186
                        E G+  R  +       + G    + DV  P  PRG  GV+G RG
Sbjct: 1531 -----------GEKGEPGRPGDPAVVGPAVAGPKGEKGDV-GPAGPRGATGVQGERG 1575



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 42/166 (25%), Positives = 56/166 (33%), Gaps = 19/166 (11%)

Query: 36   PDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPR 95
            P V G     G R + G+PG  G+    G   ++G     G P   G P S   P +   
Sbjct: 2400 PGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPP---GPPGSVGPPGASGL 2456

Query: 96   AAEKRPAEDYVPRKAKRKTD---RGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
              +K      +P     + +   RG D  P             S     E GDV  A   
Sbjct: 2457 KGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSA--- 2513

Query: 153  LRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRG-----GGRGQRG 193
                  + G       +  P  PRG +G  G RG     G +G RG
Sbjct: 2514 -----GLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRG 2554



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 15   EGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEG 74
            +G+P  E  P   G +       + G     G    +G PG  GQ+ + G     GR   
Sbjct: 2206 KGEP-GETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGA 2264

Query: 75   EGKPQGEGKPASQAKP 90
             GK    G P     P
Sbjct: 2265 SGKDGDRGSPGVPGSP 2280



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL- 60
            E+ +   +G   + G+  +   P   G       P   G     G R  +GEPG  GQ+ 
Sbjct: 1297 ERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVI 1356

Query: 61   --EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQP 94
              E  G   ++G   G   P G   P     P   P
Sbjct: 1357 GGEGPGLPGRKG-DPGPSGPPGPRGPLGDPGPRGPP 1391



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/57 (29%), Positives = 23/57 (40%)

Query: 14   NEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG 70
            ++G   D  +P D+G   E       G     G    +G+PG  G   D GS  K G
Sbjct: 2549 DKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDG 2605



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 26   DEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKP 84
            + G   +   P   G+    G+  + G+PG++GQ    G +  +G   G G P   G P
Sbjct: 2325 EPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKG-DPGVGVPGSPGPP 2382



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 35   KPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEG--KPQGEGKPASQAKP 90
            +P  +G     G R ++GE G  G+  D G   ++G    +G     G G P S   P
Sbjct: 2325 EPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPP 2382



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 8    NEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQE 67
            ++G +   G P     P  EG    +     +G+    G + D+GE G+ G     G   
Sbjct: 2657 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQP---GPKGDQGEKGERGTPGIGGFPG 2713

Query: 68   KQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYV 106
              G     G P   G    +     Q +  E+ P  + V
Sbjct: 2714 PSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERV 2752



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 45   EGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKR-PAE 103
            +G++ + GE G  GQ+   G     GR+         G P  Q  P S     E+  P  
Sbjct: 1253 KGQKGEPGEMGLRGQVGPPGDPGLPGRT---------GAPGPQGPPGSATAKGERGFPGA 1303

Query: 104  DYVPRKAKRKTDRGTDDSP 122
            D  P    R  + GT  +P
Sbjct: 1304 DGRPGSPGRAGNPGTPGAP 1322



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 6    NKNEGNLENEGKPE---DEVEPDDEGKSDEEEKPDVEGKTECEGK---REDEGEPGDEGQ 59
            N ++G   + G P    D  EP   G+      P   G    EGK   +   G PG  G 
Sbjct: 2122 NGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGG 2181

Query: 60   LEDEGSQEKQGRSEGEGKPQG----EGKPASQAKP 90
              D G     G + G   PQG    +G+P     P
Sbjct: 2182 HGDPGPPGAPGLA-GPAGPQGPSGLKGEPGETGPP 2215



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/55 (30%), Positives = 20/55 (36%)

Query: 24   PDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKP 78
            P   G+  E  KP   G+    GK  D G PG  G     G    +G     G P
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAP 2298



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 10   GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
            G +   GKP         GK  +   P V G     G    +GEPG  G       Q   
Sbjct: 2248 GQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTG----APGQAVV 2303

Query: 70   GRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDL 129
            G    +G+    G  A     E  P A   R     +P     K + G    P D  ED 
Sbjct: 2304 GLPGAKGEKGAPGGLAGDLVGE--PGAKGDRG----LPGPRGEKGEAGRAGEPGDPGEDG 2357

Query: 130  QE 131
            Q+
Sbjct: 2358 QK 2359



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query: 16   GKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRS 72
            G P    E  + G   E+ +P  EG     G     GE G++G +   G +  +G S
Sbjct: 2466 GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDS 2522


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 9/174 (5%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
           EK + K E  L  E +   E EP  + +  EEE+  +      E +RE + E   + +L 
Sbjct: 243 EKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEE-QLRKLERQELRRERQEEEQQQQRLR 301

Query: 62  DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKR-----KTDR 116
            E  Q+ + + E E + Q E +   Q + E Q    E++   +   R+ ++     + +R
Sbjct: 302 RE--QQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEER 359

Query: 117 GTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQ 170
                 ++ +E+ +E+ L  E+ +R    + R +++LR++Q++     ++R+ Q
Sbjct: 360 REQQLRREQEEERREQQLRREQQLRREQQL-RREQQLRREQQLRREQQLRREQQ 412



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 19  EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKP 78
           E+  E  +E +  +E +   E + E + +RE E     E QL  E  QE++ R +   + 
Sbjct: 312 EERREQQEERREQQERREQQEERREQQLRREQEERR--EQQLRRE--QEEERREQQLRRE 367

Query: 79  QGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEE 138
           Q E +   Q + E Q R  ++   E  + R+ + + +          Q+  +E+ L  E+
Sbjct: 368 QEEERREQQLRREQQLRREQQLRREQQLRREQQLRRE----------QQLRREQQLRREQ 417

Query: 139 MMRECGDVSRAQEELRKKQK 158
            +R    + R QEE R +QK
Sbjct: 418 QLRREQQLRREQEEERHEQK 437



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 32/158 (20%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDE--GEPGDEGQLEDEGSQEKQG 70
           E   + ++E     E +  +EE+ + + + E E +RE +   E  +E + +    ++++ 
Sbjct: 312 EERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEE 371

Query: 71  RSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQ 130
           R E + + + + +   Q + E Q R  ++   E  + R+ + + ++      +  +E  +
Sbjct: 372 RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEE 431

Query: 131 ERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRD 168
           ERH    E  R    + R QEE R         W++R+
Sbjct: 432 ERHEQKHEQERREQRLKREQEERR--------DWLKRE 461



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 34/149 (22%), Positives = 75/149 (50%), Gaps = 10/149 (6%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDE-GEPGDEGQLEDEGSQEKQGR 71
           + E + E  ++ ++E + +++E+ + + + E E +RE       +E +L+     E+Q R
Sbjct: 480 QEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLR 539

Query: 72  SEGEGKPQGEGKPASQAKPESQPRAAE-KRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQ 130
            E E + +   K   + + E + R    KR  E+   +  KR+ +R      ++ +E L+
Sbjct: 540 REQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLE 599

Query: 131 ERHLSSEEMMRECGDVSRAQEELRKKQKM 159
           +R      + RE  +V R ++E R++Q++
Sbjct: 600 QR------LKRE--EVERLEQEERREQRL 620



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 22/192 (11%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEE-------KPDVEGKTECEGKREDEGEP 54
           E+   + +   E + + E E   +   K  EEE       + + + + E E +RE   + 
Sbjct: 493 EEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKR 552

Query: 55  GDEGQLEDEGSQEKQGRSEGEGKPQ---GEGKPASQAKPESQPRAAEKRPAEDYVPR--K 109
            +E +LE E  +++  R + E + Q    E +   Q     Q    E+R   + V R  +
Sbjct: 553 EEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQ 612

Query: 110 AKRKTDRGTDDSPKDS----------QEDLQERHLSSEEMMRECGDVSRAQEELRKKQKM 159
            +R+  R   + P++           QE+ +++ L  E+  R    + R +EE R +Q++
Sbjct: 613 EERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRL 672

Query: 160 GGFHWMQRDVQD 171
              H  +R  Q+
Sbjct: 673 KREHEEERREQE 684



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)

Query: 31  DEEEKPDVEGKTEC-EGKREDEG----EPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPA 85
           DEE++   +GK    + +R++E     EP D  QLE+E  Q ++ + + + +   EG+  
Sbjct: 96  DEEKRARCDGKESLLQDRRQEEDQRRFEPRDR-QLEEEPGQRRRQKRQEQERELAEGEEQ 154

Query: 86  SQAKPESQPRAAEKRPAEDYVPRKA-KRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECG 144
           S+ +   + R  ++R  E +  R+  + + +R  ++    S +  +      EE +R   
Sbjct: 155 SEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRR-- 212

Query: 145 DVSRAQEELRKK 156
              R   ELR+K
Sbjct: 213 ---RELLELRRK 221



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRS 72
           + + + E+      E +  EE + + E    C+G   +E    ++ +  +     ++GR 
Sbjct: 165 DRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGRE 224

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRK-AKRKTDRGTDDSPKDSQEDLQE 131
           E +           Q + E Q R  ++   +++  R+   RK +    +     Q +LQE
Sbjct: 225 EKQ-----------QQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQE 273

Query: 132 -----RHLSSEEMMRECGDVSRAQEELRKKQKM 159
                R L  +E+ RE  +  + Q+ LR++Q++
Sbjct: 274 EEEQLRKLERQELRRERQEEEQQQQRLRREQQL 306



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9    EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
            E  L  + +     E + + +  E E+  ++ + +   ++E E +  +E QL  E  QE+
Sbjct: 1681 EQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLR-RQELERKFREEEQLRQETEQEQ 1739

Query: 69   QGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQED 128
              R E   K   E     Q +PE + +   ++  +     + + + +R  ++    SQE 
Sbjct: 1740 LRRQERYRKILEE----EQLRPEREEQQLRRQERDRKFREEEQLRQER--EEQQLRSQES 1793

Query: 129  LQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQ 170
              +R    EE +R+     R +++LR +Q+ G + W +  +Q
Sbjct: 1794 --DRKFREEEQLRQ----EREEQQLRPQQRDGKYRWEEEQLQ 1829



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 5/161 (3%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEG-QL 60
           E+   K+E     +    ++ E  D  K +EE +   + + + + KR+ E E  +   +L
Sbjct: 432 ERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKL 491

Query: 61  EDEGSQEKQGRSEGE-GKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 119
           E+E  +E+Q R E +  + Q E +     + E + R  ++  +E  + R+ + + ++   
Sbjct: 492 EEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLK 551

Query: 120 -DSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKM 159
            +  K  +++ +E+ L  E+  R   D    +EE R++Q++
Sbjct: 552 REEEKRLEQERREQRLKREQEERR--DQLLKREEERRQQRL 590



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 31/149 (20%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRS 72
           + E + E ++  + + + +++ + + + + E + +RE +     + + E +  +E+Q R 
Sbjct: 368 QEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRR 427

Query: 73  EGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKA---KRKTDRGTDDSPKDSQEDL 129
           E E + + E K   + + +   R  E+R   D++ R+    + + +R      +D +E+ 
Sbjct: 428 EQE-EERHEQKHEQERREQRLKREQEER--RDWLKREEETERHEQERRKQQLKRDQEEER 484

Query: 130 QERHLSSEEMMRECGDVSRAQEELRKKQK 158
           +ER L  EE  R      R +++LR++Q+
Sbjct: 485 RERWLKLEEEERR-EQQERREQQLRREQE 512



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 31/175 (17%), Positives = 81/175 (46%), Gaps = 9/175 (5%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
            E+P  +     E + + E+E++ ++E    EE +     + E + +++DE +  +E  L 
Sbjct: 976  EEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLR 1035

Query: 62   DE------GSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTD 115
            +E        +E+Q R E E + + E     + +   +     +   E+ + ++ ++   
Sbjct: 1036 EEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLL- 1094

Query: 116  RGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQ 170
               ++  K  +++ + +    EE+ +E   + R + E R++Q++   +  + +VQ
Sbjct: 1095 --REEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQ 1147



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 32/157 (20%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
            E+   +    LE + + E+E++ ++E    EE +     + E + + E+E +  +E  L 
Sbjct: 1066 EERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLR 1125

Query: 62   DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDS 121
            +E  +EK+ R E E           Q + E + +  E++   +   ++ +++ +R   + 
Sbjct: 1126 EE--REKRRRQELE----------RQYREEEEVQQEEEQLLREEPEKRRRQELERQYREE 1173

Query: 122  PKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
             +  QE+ Q      E+  +E     R +EEL+++++
Sbjct: 1174 EELQQEEEQLLREEQEKRRQERERQYREEEELQRQKR 1210



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 17  KPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG-RSEGE 75
           +   E +  +E +++EE+    +G    E   E++    +  +L  +G +EKQ  R E +
Sbjct: 175 RQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQ 234

Query: 76  GKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAK--------RKTDRGTDDSPKDSQE 127
            +   E +     K E+  R  E++  E+   R+ +        RK +R      +  +E
Sbjct: 235 DRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEE 294

Query: 128 DLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
             Q+R    +++ R+  +  R Q+E R++Q+
Sbjct: 295 QQQQRLRREQQLRRKQEEERREQQEERREQQ 325



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 27/158 (17%), Positives = 75/158 (47%), Gaps = 5/158 (3%)

Query: 19  EDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKP 78
           E+E       +  EEE+ + + + E + +RE +     + + E +  +E+Q R E + + 
Sbjct: 356 EEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRR 415

Query: 79  QGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEE 138
           + + +   Q + E +    E++  ++   ++ KR+ +   D   ++ + +  E+    ++
Sbjct: 416 EQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQ 475

Query: 139 MMRECGDVSR-----AQEELRKKQKMGGFHWMQRDVQD 171
           + R+  +  R      +EE R++Q+      ++R+ ++
Sbjct: 476 LKRDQEEERRERWLKLEEEERREQQERREQQLRREQEE 513



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
            E+P  +     E + + E+E++ ++E    EE +     + E + + E+E +  +E  L 
Sbjct: 1096 EEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLR 1155

Query: 62   DEGSQ------EKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRK 113
            +E  +      E+Q R E E + + E     + +   Q R  + R  E+   +K K++
Sbjct: 1156 EEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQR 1213



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 26/168 (15%)

Query: 7   KNEGNLENEGKPEDEVEPDDEGKSDEEEKP--------------DVEGKTECEGKREDEG 52
           + E  LE   K E E E  ++  ++EE++                +E + +    +    
Sbjct: 663 EEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSR 722

Query: 53  EPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPR-KAK 111
               EGQ   +  +EK+ R E E + Q E +   Q + E Q R        D+  + +A+
Sbjct: 723 PRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRR--------DFTWQWQAE 774

Query: 112 RKTDRGTDD-SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
            K++RG    S +    + +ER L +EE  R+  +     EE  K+Q+
Sbjct: 775 EKSERGRQRLSARPPLREQRERQLRAEE--RQQREQRFLPEEEEKEQR 820



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 35/182 (19%), Positives = 80/182 (43%), Gaps = 30/182 (16%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSD-------EEEKPDVEGKTECEGKREDEGEP 54
            E+ Y + E   E + +   +   D++ +SD       E+E    + K  C+G+  ++   
Sbjct: 1196 ERQYREEE---ELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQ 1252

Query: 55   GDEGQLEDEGSQ--------EKQGRSEGEGKPQGEGK----PASQAKPESQPRAAEKRPA 102
             ++ QL D  SQ        E+Q R   + + + + +    P  +     + + A++R  
Sbjct: 1253 LEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDR 1312

Query: 103  EDYVPR------KAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKK 156
            +    +      + +++  + TD   ++ ++ LQER    + + R+  D    +EELR +
Sbjct: 1313 KSQEEKQLLREEREEKRRRQETDRKFREEEQLLQER--EEQPLRRQERDRKFREEELRHQ 1370

Query: 157  QK 158
            ++
Sbjct: 1371 EQ 1372



 Score = 32.3 bits (72), Expect = 0.28
 Identities = 28/158 (17%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEP-GDEGQL 60
            ++ + ++E  L+   + E ++   +  +   EE+P +  +   +  R D      +E QL
Sbjct: 1618 DRKFREDEQLLQE--REEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQL 1675

Query: 61   EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD 120
              EG +++  R E + K + E +   + + E +    E++     + RK + +     + 
Sbjct: 1676 LQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQET 1735

Query: 121  SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
              +  +   + R +  EE +R      R +++LR++++
Sbjct: 1736 EQEQLRRQERYRKILEEEQLRP----EREEQQLRRQER 1769



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 7/161 (4%)

Query: 2   EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
           E+   + E  L  E   E+  E     + +EE +     + + E +RE +     + + E
Sbjct: 329 EQQEERREQQLRRE--QEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRRE 386

Query: 62  DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDS 121
            +  +E+Q R E + + + + +   Q + E Q R  ++   E    R  ++      +  
Sbjct: 387 QQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQR 446

Query: 122 PKDSQED-----LQERHLSSEEMMRECGDVSRAQEELRKKQ 157
            K  QE+      +E      E  R    + R QEE R+++
Sbjct: 447 LKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRER 487



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 13/162 (8%)

Query: 7    KNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQ 66
            + E  L  EG+ E ++   +  +   EE+  +  + E E K   E +     +LE +  +
Sbjct: 1670 REEEQLLQEGE-EQQLRRQERDRKFREEEQQLR-RQERERKFLQEEQQLRRQELERKFRE 1727

Query: 67   EKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQ 126
            E+Q R E E           Q +   Q R  +    E   P + +++  R   D     +
Sbjct: 1728 EEQLRQETE-----------QEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREE 1776

Query: 127  EDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRD 168
            E L++     +   +E     R +E+LR++++       QRD
Sbjct: 1777 EQLRQEREEQQLRSQESDRKFREEEQLRQEREEQQLRPQQRD 1818



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 29/179 (16%), Positives = 81/179 (45%), Gaps = 33/179 (18%)

Query: 13   ENEGKPEDEVEPDDEGKSDEE------EKPDVEGKTECEGKREDEGEPGDEGQL------ 60
            E + + +DE++ ++E    EE      ++ + + + E E ++E+E   G+E +       
Sbjct: 1017 ERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQEL 1076

Query: 61   ------EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT 114
                  E+E  QE++     E + +   +   Q + E + +  E++   +   ++ +++ 
Sbjct: 1077 ERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQEL 1136

Query: 115  DRG---------------TDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQK 158
            +R                 ++  K  +++L+ ++   EE+ +E   + R ++E R++++
Sbjct: 1137 ERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQER 1195


>gi|171916097 repetin [Homo sapiens]
          Length = 784

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 6   NKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGK--REDE----GEPGDEGQ 59
           N + G  + +G+     + D +G+S    +PD +G++   GK  R+D+    G+P  +GQ
Sbjct: 448 NSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDKQGQSSHYGKIDRQDQSYHYGQPDGQGQ 507

Query: 60  LEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAA 97
               G  ++QG+S   G+P  +G+ +  ++ + Q +++
Sbjct: 508 SSHYGQTDRQGQSFHYGQPDRQGQSSHYSQMDRQGQSS 545



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/89 (21%), Positives = 47/89 (52%)

Query: 9   EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
           +G   + G+P+ + +    G++D +++    G+TE +G+     +   +GQ    G  ++
Sbjct: 373 QGQSSHYGQPDTQDQSSHYGQTDRQDQSSHYGQTERQGQSSHYSQMDRQGQGSHYGQTDR 432

Query: 69  QGRSEGEGKPQGEGKPASQAKPESQPRAA 97
           QG+S   G+P  +G+ +   + + Q +++
Sbjct: 433 QGQSSHYGQPDRQGQNSHYGQTDRQGQSS 461



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/85 (22%), Positives = 44/85 (51%)

Query: 9   EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
           +G   + G+P+ + +    G++D + +    G+T+ +G+     +P  +GQ    G  ++
Sbjct: 433 QGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDKQGQSSHYGKIDR 492

Query: 69  QGRSEGEGKPQGEGKPASQAKPESQ 93
           Q +S   G+P G+G+ +   + + Q
Sbjct: 493 QDQSYHYGQPDGQGQSSHYGQTDRQ 517



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 10  GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
           G  E +G+     + D +G+          G+T+ +G+    G+P  +GQ    G  ++Q
Sbjct: 404 GQTERQGQSSHYSQMDRQGQGSHY------GQTDRQGQSSHYGQPDRQGQNSHYGQTDRQ 457

Query: 70  GRSEGEGKPQGEGKPASQAKPESQPRAA 97
           G+S   G+   +G+ +  ++P+ Q +++
Sbjct: 458 GQSSHYGQTDRQGQSSHYSQPDKQGQSS 485



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 12  LENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQ----- 66
           ++ +G+     + D +G+S    +PD +G+    G+ + +G+    GQ + +G       
Sbjct: 418 MDRQGQGSHYGQTDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQ 477

Query: 67  -EKQGRSEGEGKPQGEGKPASQAKPESQPRAA 97
            +KQG+S   GK   + +     +P+ Q +++
Sbjct: 478 PDKQGQSSHYGKIDRQDQSYHYGQPDGQGQSS 509



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 15/68 (22%), Positives = 36/68 (52%)

Query: 10  GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
           G  + +G+     +PD +G+S    + D +G++   G+ + +G+    GQ + +G     
Sbjct: 512 GQTDRQGQSFHYGQPDRQGQSSHYSQMDRQGQSSHYGQTDRQGQSSHYGQTDRQGQSYHY 571

Query: 70  GRSEGEGK 77
           G+++ +G+
Sbjct: 572 GQTDRQGQ 579



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 19/95 (20%), Positives = 46/95 (48%), Gaps = 8/95 (8%)

Query: 5   YNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEG 64
           Y+ ++ N + +G    +  P+ +G+S    +PD + ++   G+ + + +    GQ E +G
Sbjct: 353 YHYDQTNRQGQGSHYSQ--PNRQGQSSHYGQPDTQDQSSHYGQTDRQDQSSHYGQTERQG 410

Query: 65  SQ------EKQGRSEGEGKPQGEGKPASQAKPESQ 93
                   ++QG+    G+   +G+ +   +P+ Q
Sbjct: 411 QSSHYSQMDRQGQGSHYGQTDRQGQSSHYGQPDRQ 445



 Score = 34.7 bits (78), Expect = 0.056
 Identities = 18/85 (21%), Positives = 41/85 (48%)

Query: 9   EGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEK 68
           +G   + GK + + +    G+ D + +    G+T+ +G+    G+P  +GQ       ++
Sbjct: 481 QGQSSHYGKIDRQDQSYHYGQPDGQGQSSHYGQTDRQGQSFHYGQPDRQGQSSHYSQMDR 540

Query: 69  QGRSEGEGKPQGEGKPASQAKPESQ 93
           QG+S   G+   +G+ +   + + Q
Sbjct: 541 QGQSSHYGQTDRQGQSSHYGQTDRQ 565



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 6/94 (6%)

Query: 10  GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGE------PGDEGQLEDE 63
           G  + +G+     + D +G+S    +PD +G++   G+ + +G+         +GQ    
Sbjct: 308 GQTDRQGQSSHYSQTDRQGQSSHYSQPDRQGQSSHYGQMDRKGQCYHYDQTNRQGQGSHY 367

Query: 64  GSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAA 97
               +QG+S   G+P  + + +   + + Q +++
Sbjct: 368 SQPNRQGQSSHYGQPDTQDQSSHYGQTDRQDQSS 401



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 16/80 (20%), Positives = 39/80 (48%)

Query: 10  GNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQ 69
           G  + +G+     + D +G+S    +PD +G++    + + +G+    GQ + +G     
Sbjct: 500 GQPDGQGQSSHYGQTDRQGQSFHYGQPDRQGQSSHYSQMDRQGQSSHYGQTDRQGQSSHY 559

Query: 70  GRSEGEGKPQGEGKPASQAK 89
           G+++ +G+    G+   Q +
Sbjct: 560 GQTDRQGQSYHYGQTDRQGQ 579



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 24/182 (13%)

Query: 14  NEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEG----SQEKQ 69
           + G+PE +      G+S+++++     + E    R+D     ++ + +D+       E+Q
Sbjct: 145 HHGQPERQDRDSHHGQSEKQDRDSHHSQPE----RQDRDSHHNQSERQDKDFSFDQSERQ 200

Query: 70  GRSEGEGKPQGEGKPASQAKPESQPRAAEK--RPAEDYVPRKAKRKTDRGTDDSPKDSQE 127
            +    GK       + QAK +    A  +  +P +D    +++R T        + S+ 
Sbjct: 201 SQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHT--------QQSET 252

Query: 128 DLQERHLSSEEMMRE---CGDVSRAQEEL---RKKQKMGGFHWMQRDVQDPFAPRGQRGV 181
             Q  H +     +    CG   R  +EL   +  ++    H+ Q D QD     GQ   
Sbjct: 253 LGQASHFNQTNQQKSGSYCGQSERLGQELGCGQTDRQGQSSHYGQTDRQDQSYHYGQTDR 312

Query: 182 RG 183
           +G
Sbjct: 313 QG 314



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 13/132 (9%)

Query: 6   NKNEGNLENEGKPEDEVEPDDE--GKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDE 63
           NK+ G   ++ +   E   D +  G +  + +   E + +     + E + GD       
Sbjct: 91  NKSHGGRTSQQERGQEGAQDCKFPGNTGRQHRQRHEEERQNSHHSQPERQDGDS----HH 146

Query: 64  GSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPK 123
           G  E+Q R    G+ + + + +  ++PE Q R +    +E       ++  D   D S +
Sbjct: 147 GQPERQDRDSHHGQSEKQDRDSHHSQPERQDRDSHHNQSE-------RQDKDFSFDQSER 199

Query: 124 DSQEDLQERHLS 135
            SQ+    + +S
Sbjct: 200 QSQDSSSGKKVS 211



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 34/172 (19%), Positives = 71/172 (41%), Gaps = 13/172 (7%)

Query: 16  GKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGE 75
           G+ + + +    G++D +++    G+T+ +G+     +   +GQ       ++QG+S   
Sbjct: 284 GQTDRQGQSSHYGQTDRQDQSYHYGQTDRQGQSSHYSQTDRQGQSSHYSQPDRQGQSSHY 343

Query: 76  GKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDS----QEDLQE 131
           G+   +G+     +   Q + +         P +  + +  G  D+   S    Q D Q+
Sbjct: 344 GQMDRKGQCYHYDQTNRQGQGSHYSQ-----PNRQGQSSHYGQPDTQDQSSHYGQTDRQD 398

Query: 132 RHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRG 183
           +     +  R+ G  S   +  R+ Q   G H+ Q D Q   +  GQ   +G
Sbjct: 399 QSSHYGQTERQ-GQSSHYSQMDRQGQ---GSHYGQTDRQGQSSHYGQPDRQG 446



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 13  ENEGKPEDEVEPDDEGKSDEEEKPDVEG------KTECEGKREDEGEPGDEGQLEDEGSQ 66
           + +G+     +PD +G+S    + D +G      +T  +G+     +P  +GQ    G  
Sbjct: 323 DRQGQSSHYSQPDRQGQSSHYGQMDRKGQCYHYDQTNRQGQGSHYSQPNRQGQSSHYGQP 382

Query: 67  EKQGRSEGEGKPQGEGKPASQAKPESQPRAA 97
           + Q +S   G+   + + +   + E Q +++
Sbjct: 383 DTQDQSSHYGQTDRQDQSSHYGQTERQGQSS 413


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 14/166 (8%)

Query: 12  LENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL-EDEGSQEKQG 70
           L    +P +E E  +    +   + D   KTE E + E+E E  DE +  +DEG + ++ 
Sbjct: 239 LSEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREA 298

Query: 71  RSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQ 130
               E K +GE  P  + KPE      ++RP      ++   +  R T      SQE+ +
Sbjct: 299 PILKEFKEEGEEIP--RVKPEEM---MDERPKTRSQEQEVLERGGRFT-----RSQEEAR 348

Query: 131 ERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPR 176
           + HL+ ++  +E    S  +EE R+ +   G   ++   + P  PR
Sbjct: 349 KSHLARQQQEKEMKTTSPLEEEEREIKSSQG---LKEKSKSPSPPR 391



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 1   MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTEC------EGKREDEGEP 54
           +EK        LE E +   E+E       DE   P  EG                E E 
Sbjct: 141 LEKQQELLRQRLEREAREAAELEEASAESEDEMIHP--EGVASLLPPDFQSSLERPELEL 198

Query: 55  GDEGQLEDEGSQEKQGRSEGEGKPQGEG-----KPASQAKPESQPRAAEKRPAEDYVPRK 109
                 +     E++G S+ E   +GE      + A  AK     + AE+   ++   R 
Sbjct: 199 SRHSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRN 258

Query: 110 AKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMG 160
            + + DR      ++ +E+ +E     EE   E G  SR    L++ ++ G
Sbjct: 259 LRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDE-GQKSREAPILKEFKEEG 308



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 2    EKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLE 61
            E+   + E   E + + E E E +   + + E++ +   + + E +RE E + GD  +  
Sbjct: 1247 EREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDR-- 1304

Query: 62   DEGSQEKQGRSEGEGKPQGEGKPASQAKPESQP 94
                  ++ R  G  + + + K  S+++  S P
Sbjct: 1305 ----DRERDRERGRERDRRDTKRHSRSRSRSTP 1333


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.303    0.130    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,459,812
Number of Sequences: 37866
Number of extensions: 652275
Number of successful extensions: 16576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 693
Number of HSP's that attempted gapping in prelim test: 4138
Number of HSP's gapped (non-prelim): 7388
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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