Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 55749397
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55749397 transcription elongation factor A (SII)-like 1
[Homo sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55749424 transcription elongation factor A (SII)-like 1 [Homo... 328 2e-90
gi|55749406 transcription elongation factor A (SII)-like 1 [Homo... 328 2e-90
gi|55749397 transcription elongation factor A (SII)-like 1 [Homo... 328 2e-90
gi|55743140 WW domain binding protein 5 [Homo sapiens] 81 3e-16
gi|55743147 WW domain binding protein 5 [Homo sapiens] 81 3e-16
gi|10047100 WW domain binding protein 5 [Homo sapiens] 81 3e-16
gi|55743145 WW domain binding protein 5 [Homo sapiens] 81 3e-16
gi|55749466 transcription elongation factor A (SII)-like 8 [Homo... 64 7e-11
gi|23503247 transcription elongation factor A (SII)-like 8 [Homo... 64 7e-11
gi|23397409 transcription elongation factor A (SII)-like 7 [Homo... 54 6e-08
gi|55749459 transcription elongation factor A (SII)-like 4 [Homo... 45 3e-05
gi|55749442 transcription elongation factor A (SII)-like 4 [Homo... 45 3e-05
gi|65505873 transcription elongation factor A (SII)-like 4 [Homo... 45 3e-05
gi|55749451 transcription elongation factor A (SII)-like 4 [Homo... 45 3e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 4e-04
gi|17975763 myelin transcription factor 1 [Homo sapiens] 40 8e-04
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 40 0.001
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 40 0.001
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 39 0.002
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 39 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 39 0.002
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 38 0.004
gi|17933774 transcription elongation factor A (SII)-like 2 [Homo... 38 0.004
gi|19923399 Ras-GTPase activating protein SH3 domain-binding pro... 37 0.005
gi|45359849 Ras-GTPase activating protein SH3 domain-binding pro... 37 0.005
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 37 0.007
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 37 0.009
gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens] 36 0.012
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 36 0.012
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 36 0.012
>gi|55749424 transcription elongation factor A (SII)-like 1 [Homo
sapiens]
Length = 159
Score = 328 bits (840), Expect = 2e-90
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE
Sbjct: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
Query: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR
Sbjct: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
Query: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI
Sbjct: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
>gi|55749406 transcription elongation factor A (SII)-like 1 [Homo
sapiens]
Length = 159
Score = 328 bits (840), Expect = 2e-90
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE
Sbjct: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
Query: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR
Sbjct: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
Query: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI
Sbjct: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
>gi|55749397 transcription elongation factor A (SII)-like 1 [Homo
sapiens]
Length = 159
Score = 328 bits (840), Expect = 2e-90
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE
Sbjct: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
Query: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR
Sbjct: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
Query: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI
Sbjct: 121 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
>gi|55743140 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 81.3 bits (199), Expect = 3e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 80 EGRPPMEQPPCGVGKHKLEE-----GSFKERLARSRPQFRGDIHGRNLSNEEMIQAADEL 134
E P E+ P + KLEE G+F+ERL +S +F+ DIH R+LSNE+M + DE+
Sbjct: 20 EEEPKPEEKP--EEEEKLEEEAKAKGTFRERLIQSLQEFKEDIHNRHLSNEDMFREVDEI 77
Query: 135 EEMKRVRNKLMIMHWKAKRSRPYP 158
+E++RVRNKL++M WK R+ PYP
Sbjct: 78 DEIRRVRNKLIVMRWKVNRNHPYP 101
>gi|55743147 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 81.3 bits (199), Expect = 3e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 80 EGRPPMEQPPCGVGKHKLEE-----GSFKERLARSRPQFRGDIHGRNLSNEEMIQAADEL 134
E P E+ P + KLEE G+F+ERL +S +F+ DIH R+LSNE+M + DE+
Sbjct: 20 EEEPKPEEKP--EEEEKLEEEAKAKGTFRERLIQSLQEFKEDIHNRHLSNEDMFREVDEI 77
Query: 135 EEMKRVRNKLMIMHWKAKRSRPYP 158
+E++RVRNKL++M WK R+ PYP
Sbjct: 78 DEIRRVRNKLIVMRWKVNRNHPYP 101
>gi|10047100 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 81.3 bits (199), Expect = 3e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 80 EGRPPMEQPPCGVGKHKLEE-----GSFKERLARSRPQFRGDIHGRNLSNEEMIQAADEL 134
E P E+ P + KLEE G+F+ERL +S +F+ DIH R+LSNE+M + DE+
Sbjct: 20 EEEPKPEEKP--EEEEKLEEEAKAKGTFRERLIQSLQEFKEDIHNRHLSNEDMFREVDEI 77
Query: 135 EEMKRVRNKLMIMHWKAKRSRPYP 158
+E++RVRNKL++M WK R+ PYP
Sbjct: 78 DEIRRVRNKLIVMRWKVNRNHPYP 101
>gi|55743145 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 81.3 bits (199), Expect = 3e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 80 EGRPPMEQPPCGVGKHKLEE-----GSFKERLARSRPQFRGDIHGRNLSNEEMIQAADEL 134
E P E+ P + KLEE G+F+ERL +S +F+ DIH R+LSNE+M + DE+
Sbjct: 20 EEEPKPEEKP--EEEEKLEEEAKAKGTFRERLIQSLQEFKEDIHNRHLSNEDMFREVDEI 77
Query: 135 EEMKRVRNKLMIMHWKAKRSRPYP 158
+E++RVRNKL++M WK R+ PYP
Sbjct: 78 DEIRRVRNKLIVMRWKVNRNHPYP 101
>gi|55749466 transcription elongation factor A (SII)-like 8 [Homo
sapiens]
Length = 117
Score = 63.5 bits (153), Expect = 7e-11
Identities = 52/165 (31%), Positives = 72/165 (43%), Gaps = 58/165 (35%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
M K +ENE +PQ+ PK +E+RP E+ E E P+
Sbjct: 1 MQKSCEENEGKPQNMPKAEEDRP---------------LEDVPQEAEGNPQ--------- 36
Query: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
P +EG+S++ R QP G F+ D R
Sbjct: 37 -------PSEEGVSQEAEGNPRGGPNQPGQG---------------------FKEDTPVR 68
Query: 121 NLSNEEMIQAADELE----EMKRVRNKLMIMHWKAK--RSRPYPI 159
+L EEMI+ DELE E++RVRNK ++MHWK + RSRPYP+
Sbjct: 69 HLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQRHSRSRPYPV 113
>gi|23503247 transcription elongation factor A (SII)-like 8 [Homo
sapiens]
Length = 117
Score = 63.5 bits (153), Expect = 7e-11
Identities = 52/165 (31%), Positives = 72/165 (43%), Gaps = 58/165 (35%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
M K +ENE +PQ+ PK +E+RP E+ E E P+
Sbjct: 1 MQKSCEENEGKPQNMPKAEEDRP---------------LEDVPQEAEGNPQ--------- 36
Query: 61 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR 120
P +EG+S++ R QP G F+ D R
Sbjct: 37 -------PSEEGVSQEAEGNPRGGPNQPGQG---------------------FKEDTPVR 68
Query: 121 NLSNEEMIQAADELE----EMKRVRNKLMIMHWKAK--RSRPYPI 159
+L EEMI+ DELE E++RVRNK ++MHWK + RSRPYP+
Sbjct: 69 HLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQRHSRSRPYPV 113
>gi|23397409 transcription elongation factor A (SII)-like 7 [Homo
sapiens]
Length = 100
Score = 53.9 bits (128), Expect = 6e-08
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 80 EGRPPMEQP------PCGVGKHKLEEGSFKERLARSRPQFRGDIHGRNLSNEEMIQAADE 133
EG+P P P G + + EG+F++RL +S +F+ DI R+ +EEM + DE
Sbjct: 9 EGKPKCSVPKREEKRPYGEFERQQTEGNFRQRLLQSLEEFKEDIDYRHFKDEEMTREGDE 68
Query: 134 ----LEEMKRVRNKLMIMH--WKAKRSRPYPI 159
LEE++ +R K +H + R RPYPI
Sbjct: 69 MERCLEEIRGLRKKFRALHSNHRHSRDRPYPI 100
Score = 32.3 bits (72), Expect = 0.18
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 1 MDKPRKENEEEPQ-SAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEEL 53
M KP KENE +P+ S PK +E+RP E E+Q E + E F E++
Sbjct: 1 MQKPCKENEGKPKCSVPKREEKRPYGEF--ERQQTEGNFRQRLLQSLEEFKEDI 52
>gi|55749459 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 44.7 bits (104), Expect = 3e-05
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 5 RKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEE---QSSEEEFFPEELLPELLPEM 61
+ ENEE+PQ DE +P V + E + E + E ++ +EE ++ PE E
Sbjct: 17 KMENEEQPQ-----DERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEA 71
Query: 62 LLSEERPPQEGLSR---------KDLFEGRPPMEQPPCG----VGKHKLEEG-------S 101
E + +EG S K EG+P E P GK E+
Sbjct: 72 --KEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAEDDVPRKAKRK 129
Query: 102 FKERLARSRPQFRGDIHGRNLSNEEMIQAADEL----EEMKRVRNKLMIMHW 149
+ LA +++ IH N SNE+MI+ D + +E ++ + KL W
Sbjct: 130 TNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFLW 181
>gi|55749442 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 44.7 bits (104), Expect = 3e-05
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 5 RKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEE---QSSEEEFFPEELLPELLPEM 61
+ ENEE+PQ DE +P V + E + E + E ++ +EE ++ PE E
Sbjct: 17 KMENEEQPQ-----DERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEA 71
Query: 62 LLSEERPPQEGLSR---------KDLFEGRPPMEQPPCG----VGKHKLEEG-------S 101
E + +EG S K EG+P E P GK E+
Sbjct: 72 --KEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAEDDVPRKAKRK 129
Query: 102 FKERLARSRPQFRGDIHGRNLSNEEMIQAADEL----EEMKRVRNKLMIMHW 149
+ LA +++ IH N SNE+MI+ D + +E ++ + KL W
Sbjct: 130 TNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFLW 181
>gi|65505873 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 44.7 bits (104), Expect = 3e-05
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 5 RKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEE---QSSEEEFFPEELLPELLPEM 61
+ ENEE+PQ DE +P V + E + E + E ++ +EE ++ PE E
Sbjct: 17 KMENEEQPQ-----DERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEA 71
Query: 62 LLSEERPPQEGLSR---------KDLFEGRPPMEQPPCG----VGKHKLEEG-------S 101
E + +EG S K EG+P E P GK E+
Sbjct: 72 --KEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAEDDVPRKAKRK 129
Query: 102 FKERLARSRPQFRGDIHGRNLSNEEMIQAADEL----EEMKRVRNKLMIMHW 149
+ LA +++ IH N SNE+MI+ D + +E ++ + KL W
Sbjct: 130 TNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFLW 181
>gi|55749451 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 44.7 bits (104), Expect = 3e-05
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 5 RKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEE---QSSEEEFFPEELLPELLPEM 61
+ ENEE+PQ DE +P V + E + E + E ++ +EE ++ PE E
Sbjct: 17 KMENEEQPQ-----DERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEA 71
Query: 62 LLSEERPPQEGLSR---------KDLFEGRPPMEQPPCG----VGKHKLEEG-------S 101
E + +EG S K EG+P E P GK E+
Sbjct: 72 --KEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAEDDVPRKAKRK 129
Query: 102 FKERLARSRPQFRGDIHGRNLSNEEMIQAADEL----EEMKRVRNKLMIMHW 149
+ LA +++ IH N SNE+MI+ D + +E ++ + KL W
Sbjct: 130 TNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFLW 181
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 41.2 bits (95), Expect = 4e-04
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 6 KENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSE 65
+E EEE + + +EE E E++ EE+ EE+ EEE F EE E E L E
Sbjct: 888 EEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEE---EGELEE 944
Query: 66 ERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGS 101
E ++ ++L E +E G ++EEG+
Sbjct: 945 EEEEEDEEEEEELEE----VEDLEFGTAGGEVEEGA 976
Score = 37.4 bits (85), Expect = 0.005
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEM 61
++ +E EEE + + +EE E E++ EE+ EE+ EEEF EE EL E
Sbjct: 889 EEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEE--GELEEEE 946
Query: 62 LLSEERPPQE---------GLSRKDLFEGRPP 84
+E +E G + ++ EG PP
Sbjct: 947 EEEDEEEEEELEEVEDLEFGTAGGEVEEGAPP 978
Score = 30.0 bits (66), Expect = 0.87
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 18/110 (16%)
Query: 7 ENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSS-------EEQSSEEEFFPEELLPELLP 59
E EE P PP E SP K PE + EE +EEE + P L P
Sbjct: 971 EVEEGAPPPPTLPPALPPPE-SPPKVQPEPEPEPGLLLEVEEPGTEEER-GADTAPTLAP 1028
Query: 60 EMLLSEERPPQEGLSRKDLFEGRPPME------QPPCGVGKHKLEEGSFK 103
E L S+ +EG S G PP E P + + + E+GS K
Sbjct: 1029 EALPSQGEVEREGESPA---AGPPPQELVEEEPSAPPTLLEEETEDGSDK 1075
Score = 26.9 bits (58), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 4 PRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEE 46
P +E EE SAP T E + S + Q P E +EE+ E
Sbjct: 1049 PPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEMETE 1091
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.0 bits (92), Expect = 8e-04
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPE 56
D+ +E EEE + + +EE E E++ EE+ EE+ EEE P+ + E
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQE 315
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 6 KENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSE 65
+E+EEE + + +E+ E E++ EE+ EE+ EEE EE E P+++ E
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE---EEEEEEAAPDVIFQE 315
Query: 66 ERPPQEGLSRKDLFEGRPPMEQPPCGV 92
+ +L P +P V
Sbjct: 316 DTSHTSAQKAPELRGPESPSPKPEYSV 342
Score = 33.5 bits (75), Expect = 0.079
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEE 52
++ +E E+E + + +EE E E++ EE+ EE+++ + F E+
Sbjct: 266 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEM 61
D +E+ ++ +E+ E E++ EE+ EE+ EEE EE E E
Sbjct: 242 DAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Query: 62 LLSEERPP 69
EE P
Sbjct: 302 EEEEEAAP 309
Score = 29.3 bits (64), Expect = 1.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 11 EPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPPQ 70
E ++ ++ +++ + H E + EE+ EE+ EEE EE E E EE +
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 71 E 71
E
Sbjct: 301 E 301
Score = 27.3 bits (59), Expect = 5.6
Identities = 18/77 (23%), Positives = 32/77 (41%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
++ E + + +EE E E++ +E+ EE+ EEE EE E E
Sbjct: 240 LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 299
Query: 61 MLLSEERPPQEGLSRKD 77
EE + + ++D
Sbjct: 300 EEEEEEEAAPDVIFQED 316
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 6 KENEEEPQSAPKTDEERPPV----EHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEM 61
+EN++E + + +EE+P E+ E++ + Q+ E+ E++ P E+ E
Sbjct: 175 EENKKEDKEKEEEEEEKPKRGSIGENQGEEKGTKVQAKREKLQEDK--PTFKKEEIKDEK 232
Query: 62 LLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLE--EGSFKERLARSRPQFRGDIHG 119
+ ++ P +E S D +G ++ HKL+ E +F SRP R +
Sbjct: 233 IKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTF------SRPGGRASVDT 286
Query: 120 RNLSNEEMIQAADELEEMKRVRNK 143
+ ++A LEE++R R +
Sbjct: 287 KEAEGAPQVEAGKRLEELRRRRGE 310
Score = 26.6 bits (57), Expect = 9.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 17 KTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPPQEGLS 74
K +E R +E +++ EE + + EE+ +E + E ++ P++GLS
Sbjct: 336 KREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLS 393
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 6 KENEEEPQSAPKTDEERPPV----EHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEM 61
+EN++E + + +EE+P E+ E++ + Q+ E+ E++ P E+ E
Sbjct: 181 EENKKEDKEKEEEEEEKPKRGSIGENQGEEKGTKVQAKREKLQEDK--PTFKKEEIKDEK 238
Query: 62 LLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLE--EGSFKERLARSRPQFRGDIHG 119
+ ++ P +E S D +G ++ HKL+ E +F SRP R +
Sbjct: 239 IKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTF------SRPGGRASVDT 292
Query: 120 RNLSNEEMIQAADELEEMKRVRNK 143
+ ++A LEE++R R +
Sbjct: 293 KEAEGAPQVEAGKRLEELRRRRGE 316
Score = 26.6 bits (57), Expect = 9.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 17 KTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPPQEGLS 74
K +E R +E +++ EE + + EE+ +E + E ++ P++GLS
Sbjct: 342 KREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLS 399
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 4 PRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLL 63
P +E P+ AP DE P E P +Q P EE P+E + E+ L
Sbjct: 581 PHEEATTLPEEAPSNDERTPEEEAPPNEQRP---------LREEVLPKEGVAS-KEEVTL 630
Query: 64 SEERPPQEGLSRKDLFEGRPPMEQ 87
EE PP+E ++ K E PP+E+
Sbjct: 631 KEELPPKEEVAPK---EEVPPIER 651
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 4 PRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLL 63
P +E P+ AP DE P E P +Q P EE P+E + E+ L
Sbjct: 470 PHEEATTLPEEAPSNDERTPEEEAPPNEQRP---------LREEVLPKEGVAS-KEEVTL 519
Query: 64 SEERPPQEGLSRKDLFEGRPPMEQ 87
EE PP+E ++ K E PP+E+
Sbjct: 520 KEELPPKEEVAPK---EEVPPIER 540
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 38.5 bits (88), Expect = 0.002
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 16/158 (10%)
Query: 6 KENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFF--PEELLPELLPEMLL 63
+E EEE + + +E++ E +K+ +E+ EE +EE F EE++ E E L
Sbjct: 2263 REEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLS 2322
Query: 64 SEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSR--PQFRGDIHGRN 121
EE + +++ + +++ + KL+E K R R RG HG+
Sbjct: 2323 DEEEEEESCSLEEEVDREKEILKKEK----QFKLQEQRRKSLRGRERVLSILRGVPHGKG 2378
Query: 122 LSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI 159
A L +K KLM + K P P+
Sbjct: 2379 --------RAIRLGVLKSPLKKLMSTALEMKEKTPVPV 2408
Score = 33.9 bits (76), Expect = 0.060
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 2 DKPRKE---NEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELL 58
DKP+++ +E +S EE + EKQ EE+ EEE EE + E
Sbjct: 2207 DKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVRE-- 2264
Query: 59 PEMLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIH 118
E EE +E K+ E + ++ K EE KE + + + +
Sbjct: 2265 EEEERKEEEEGEEKQVEKEEEEKKKKKKE-------KKKEEVQEKEEVFEEKEEIMSEEE 2317
Query: 119 GRNLSNEEMIQAADELEE 136
+LS+EE + + LEE
Sbjct: 2318 TESLSDEEEEEESCSLEE 2335
Score = 29.6 bits (65), Expect = 1.1
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
M+ E E++ + + +EER E E++ EE+ EE+ EEE +++ E +
Sbjct: 2230 MESLLDELEKQESLSSEEEEEREEEEEREEEEVREEE--EERKEEEEGEEKQVEKEEEEK 2287
Query: 61 MLLSEERPPQEGLSRKDLFE 80
+E+ +E ++++FE
Sbjct: 2288 KKKKKEKKKEEVQEKEEVFE 2307
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 37.7 bits (86), Expect = 0.004
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 11 EPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPPQ 70
+PQ+ K +EE + E++ EE+ EE+ EEE EE E + L E P+
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPR 785
Query: 71 EGLS 74
G S
Sbjct: 786 SGSS 789
Score = 28.1 bits (61), Expect = 3.3
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLP 55
++ +E+EEE + DEE E E++ EE+ EE+++ E L P
Sbjct: 735 EEEEEEDEEEEEE----DEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGP 784
Score = 26.9 bits (58), Expect = 7.4
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 15/84 (17%)
Query: 11 EPQSAPKTDEE----RP-PVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSE 65
EP ++ TDEE RP P E ++ E + + + EE L L P+ L
Sbjct: 560 EPSTSGTTDEEPEELRPLPEEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQPL--- 616
Query: 66 ERPPQEGLSRKDLFEGRPPMEQPP 89
PPQ LS+ D GR QPP
Sbjct: 617 --PPQ--LSQGD---GRSETSQPP 633
>gi|17933774 transcription elongation factor A (SII)-like 2 [Homo
sapiens]
Length = 227
Score = 37.7 bits (86), Expect = 0.004
Identities = 47/188 (25%), Positives = 69/188 (36%), Gaps = 53/188 (28%)
Query: 1 MDKPRKENEEEPQSAPKTD-EERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLP 59
M+K ENE P + K D EE+PP E PE E E E + +
Sbjct: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-----E 55
Query: 60 EMLLSEERPPQEGLSRKD---------------------------LFEGRPPMEQPPCGV 92
E L +E+P G ++ + EG P E+ P
Sbjct: 56 EPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESE 115
Query: 93 GKHKLEEGSFKER-----------------LARSRPQFRGDIHGRNLSNEEMIQAADELE 135
G+ + E + +R LA+ Q++ IH N SNE+MI+ E +
Sbjct: 116 GEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIR---EFD 172
Query: 136 EMKRVRNK 143
M RV +K
Sbjct: 173 NMARVEDK 180
>gi|19923399 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform a [Homo sapiens]
Length = 482
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
+++ E E EP+S KT+E +P VE + EE+S+ +E P+E
Sbjct: 189 LEESSHEPEPEPESETKTEELKPQVEEK-NLEELEEKSTTPPPAEPVSLPQEPPKAFSWA 247
Query: 61 MLLSEERPPQEGLSRKDL-FEGRPPMEQPPCGVGKH-KLEEGSFKERLARSRPQF----- 113
+ S+ PP +S + + P+ QP + + +E+ R RP F
Sbjct: 248 SVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFPPRGP 307
Query: 114 ---RGDIHGRNLSNEEMIQAAD 132
RGD+ + N +I+ D
Sbjct: 308 RPGRGDMEQNDSDNRRIIRYPD 329
>gi|45359849 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform a [Homo sapiens]
Length = 482
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
+++ E E EP+S KT+E +P VE + EE+S+ +E P+E
Sbjct: 189 LEESSHEPEPEPESETKTEELKPQVEEK-NLEELEEKSTTPPPAEPVSLPQEPPKAFSWA 247
Query: 61 MLLSEERPPQEGLSRKDL-FEGRPPMEQPPCGVGKH-KLEEGSFKERLARSRPQF----- 113
+ S+ PP +S + + P+ QP + + +E+ R RP F
Sbjct: 248 SVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFPPRGP 307
Query: 114 ---RGDIHGRNLSNEEMIQAAD 132
RGD+ + N +I+ D
Sbjct: 308 RPGRGDMEQNDSDNRRIIRYPD 329
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 37.0 bits (84), Expect = 0.007
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 20 EERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPP 69
EE+PPV SP ++ EE+ EE+ +EEE E+ SEE PP
Sbjct: 302 EEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEED-----------SEEAPP 340
Score = 28.9 bits (63), Expect = 1.9
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEM 61
D + E+ P + T+EE E++ EE+ +EE+ EE+ EE P L P
Sbjct: 296 DLTEPKEEQPPVPSSPTEEEE-------EEEEEEEEEAEEEEEEED--SEEAPPPLSPPQ 346
Query: 62 LLS----EERPPQE 71
S ++ PP +
Sbjct: 347 PASPAEEDKMPPYD 360
Score = 28.1 bits (61), Expect = 3.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEE 41
+ +P++E P S + +EE E ++ EE+ SEE
Sbjct: 297 LTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEE 337
Score = 26.6 bits (57), Expect = 9.6
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEE 46
++ +E E E + + EE PP P+ SP E+ E+
Sbjct: 318 EEEEEEEEAEEEEEEEDSEEAPPPLSPPQPASPAEEDKMPPYDEQ 362
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 36.6 bits (83), Expect = 0.009
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 8/135 (5%)
Query: 2 DKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELL--- 58
D + EE+P K +EE EK+ ++ S E SSEE E L
Sbjct: 306 DSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSEASSALFMAK 365
Query: 59 PEMLLSEERPPQEGLSRKDLFEGRPPME----QPPCGVGKHKLEEGSFKERLARSRPQFR 114
+ ER P G SR + G P E KLE+G + ++ + R
Sbjct: 366 KKTPPKRERKPSGGSSRGNSRPGTPSAEGGSTSSTLRAAASKLEQGKRVSEMPAAK-RLR 424
Query: 115 GDIHGRNLSNEEMIQ 129
D ++LS + Q
Sbjct: 425 LDTGPQSLSGKSTPQ 439
Score = 30.8 bits (68), Expect = 0.51
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE 60
M ++EEP+S K ++ + E+ E+S EE+ EE+ EE
Sbjct: 274 MSDGSSSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEE-------- 325
Query: 61 MLLSEERP-PQEGLSRKDLFEGRPPMEQ 87
++ P PQE RKD E E+
Sbjct: 326 ---EKKAPTPQEKKRRKDSSEESDSSEE 350
>gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]
Length = 282
Score = 36.2 bits (82), Expect = 0.012
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 1 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEE-------- 52
+++ +E +EE + A + D E E E+ EE EE++ E E P E
Sbjct: 8 VEEYEEEEQEEQEEAAEEDAE---AEAETEETRAEEDEEEEEAKEAEDGPMEESKPKPRS 64
Query: 53 LLPELLPEMLLSEERPPQEGLSR----KDLFEGRPPMEQPPCGVGKHKLEEGSFKERLAR 108
+P L+P + ER + + R KDL E + +E K + E S K+R+ R
Sbjct: 65 FMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIER 124
Query: 109 SRPQ 112
R +
Sbjct: 125 RRAE 128
Score = 27.7 bits (60), Expect = 4.3
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 18 TDEERPPVEHSPEKQSPEEQSSEE----QSSEEEFFPEELLPELLPEMLLSEERPPQEGL 73
+D E E+ E+Q +E+++EE ++ EE EE E E +E+ P +E
Sbjct: 2 SDIEEVVEEYEEEEQEEQEEAAEEDAEAEAETEETRAEE--DEEEEEAKEAEDGPMEESK 59
Query: 74 SRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDI----HGRNLSNEEMIQ 129
+ F P + P G+ + ++R+ + + + I R EE++
Sbjct: 60 PKPRSF--MPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVS 117
Query: 130 AADELE-------EMKRVRNK 143
D +E E +R+RN+
Sbjct: 118 LKDRIERRRAERAEQQRIRNE 138
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 36.2 bits (82), Expect = 0.012
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 6 KENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFF--------------PE 51
+E EEE Q +E+ E E ++ E++ E+ EEE P
Sbjct: 9 EEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPKPR 68
Query: 52 ELLPELLPEMLLSEERPPQEGLSR----KDLFEGRPPMEQPPCGVGKHKLEEGSFKERLA 107
+P L+P + ER + + R KDL E + +E K + E S K+R+
Sbjct: 69 SFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIE 128
Query: 108 RSRPQ 112
R R +
Sbjct: 129 RRRAE 133
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 36.2 bits (82), Expect = 0.012
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 6 KENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFF--------------PE 51
+E EEE Q +E+ E E ++ E++ E+ EEE P
Sbjct: 9 EEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPKPR 68
Query: 52 ELLPELLPEMLLSEERPPQEGLSR----KDLFEGRPPMEQPPCGVGKHKLEEGSFKERLA 107
+P L+P + ER + + R KDL E + +E K + E S K+R+
Sbjct: 69 SFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIE 128
Query: 108 RSRPQ 112
R R +
Sbjct: 129 RRRAE 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,305,554
Number of Sequences: 37866
Number of extensions: 473975
Number of successful extensions: 7592
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 366
Number of HSP's that attempted gapping in prelim test: 3888
Number of HSP's gapped (non-prelim): 2766
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.