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Search of human proteins with 55741647
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55741647 hypothetical protein LOC158405 [Homo sapiens]
(716 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55741647 hypothetical protein LOC158405 [Homo sapiens] 1459 0.0
gi|37574606 zinc finger protein 198 [Homo sapiens] 57 8e-08
gi|4508011 zinc finger protein 198 [Homo sapiens] 57 8e-08
gi|165377167 zinc finger protein 276 isoform a [Homo sapiens] 54 5e-07
gi|40805102 zinc finger protein 276 isoform b [Homo sapiens] 54 5e-07
gi|42475941 zinc finger protein 261 [Homo sapiens] 52 2e-06
gi|4827067 zinc finger protein 261 [Homo sapiens] 52 2e-06
gi|44890068 zinc finger protein 262 [Homo sapiens] 52 2e-06
gi|218505694 potassium channel tetramerisation domain containing... 51 4e-06
gi|38570099 glutamine-rich 1 [Homo sapiens] 49 2e-05
gi|38570097 glutamine-rich 1 [Homo sapiens] 49 2e-05
gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens] 40 0.008
gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens] 40 0.008
gi|210032580 SET domain containing 1B [Homo sapiens] 39 0.017
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 37 0.083
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 37 0.083
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 37 0.083
gi|83776598 virus-induced signaling adapter [Homo sapiens] 37 0.083
gi|148612879 polyhomeotic like 3 [Homo sapiens] 37 0.083
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.11
gi|83367077 mucin 16 [Homo sapiens] 36 0.14
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 36 0.14
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 35 0.19
gi|20270323 zinc finger protein 653 [Homo sapiens] 35 0.19
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 35 0.19
gi|150170670 piccolo isoform 2 [Homo sapiens] 34 0.41
gi|150378539 piccolo isoform 1 [Homo sapiens] 34 0.41
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 34 0.54
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 33 0.71
gi|55956910 meningioma 1 [Homo sapiens] 33 0.71
>gi|55741647 hypothetical protein LOC158405 [Homo sapiens]
Length = 716
Score = 1459 bits (3777), Expect = 0.0
Identities = 716/716 (100%), Positives = 716/716 (100%)
Query: 1 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL 60
MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
Sbjct: 1 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL 60
Query: 61 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC 120
TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
Sbjct: 61 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC 120
Query: 121 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS 180
DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
Sbjct: 121 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS 180
Query: 181 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT 240
SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
Sbjct: 181 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT 240
Query: 241 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH 300
HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
Sbjct: 241 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH 300
Query: 301 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS 360
GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
Sbjct: 301 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS 360
Query: 361 VNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNT 420
VNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNT
Sbjct: 361 VNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNT 420
Query: 421 TKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHA 480
TKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHA
Sbjct: 421 TKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHA 480
Query: 481 IRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEE 540
IRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEE
Sbjct: 481 IRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEE 540
Query: 541 MWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDS 600
MWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDS
Sbjct: 541 MWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDS 600
Query: 601 VKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEA 660
VKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEA
Sbjct: 601 VKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEA 660
Query: 661 TDMGSVWYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ 716
TDMGSVWYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ
Sbjct: 661 TDMGSVWYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ 716
>gi|37574606 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 56.6 bits (135), Expect = 8e-08
Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 47/293 (16%)
Query: 426 YALNVWRYWCMTNGLKDHT----------------DITKIPAVKLNELLENFYVTVKKSD 469
Y +N W++W T L + D+ +LN L +F +++ +
Sbjct: 1074 YGVNAWKHWVKTRQLDEDLLVLDELKSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPN 1133
Query: 470 GSDFLATSLHAIRRGLDRIL----KNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGA 525
G ++ S++ + G+ L + + TF K+ W S
Sbjct: 1134 GENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRS-WQPSILPDGSI 1192
Query: 526 RSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIEL 585
FS +E+ +W+ LG SP+ LL+T+ +N++Y ++T+++H L +G +
Sbjct: 1193 -------FSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTV-- 1243
Query: 586 LKDPQNQPYFARTDSVKRESRS------GSTRVCHGKIYH----------EHSRGHKQCP 629
+ + P + R S ++ GK H E++ +CP
Sbjct: 1244 FRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCP 1303
Query: 630 YCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQRMGLRSLRGIV 682
+ Y+ P + FYL ++ VWY + +L ++
Sbjct: 1304 VKMFECYL-SKSPQNLNQRMDVFYLQPECSSSTDSPVWYTSTSLDRNTLENML 1355
>gi|4508011 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 56.6 bits (135), Expect = 8e-08
Identities = 55/293 (18%), Positives = 109/293 (37%), Gaps = 47/293 (16%)
Query: 426 YALNVWRYWCMTNGLKDHT----------------DITKIPAVKLNELLENFYVTVKKSD 469
Y +N W++W T L + D+ +LN L +F +++ +
Sbjct: 1074 YGVNAWKHWVKTRQLDEDLLVLDELKSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPN 1133
Query: 470 GSDFLATSLHAIRRGLDRIL----KNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGA 525
G ++ S++ + G+ L + + TF K+ W S
Sbjct: 1134 GENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRS-WQPSILPDGSI 1192
Query: 526 RSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIEL 585
FS +E+ +W+ LG SP+ LL+T+ +N++Y ++T+++H L +G +
Sbjct: 1193 -------FSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTV-- 1243
Query: 586 LKDPQNQPYFARTDSVKRESRS------GSTRVCHGKIYH----------EHSRGHKQCP 629
+ + P + R S ++ GK H E++ +CP
Sbjct: 1244 FRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCP 1303
Query: 630 YCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQRMGLRSLRGIV 682
+ Y+ P + FYL ++ VWY + +L ++
Sbjct: 1304 VKMFECYL-SKSPQNLNQRMDVFYLQPECSSSTDSPVWYTSTSLDRNTLENML 1355
>gi|165377167 zinc finger protein 276 isoform a [Homo sapiens]
Length = 614
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 3 DCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTA 62
D + +S + L LV W H H C +P+L+ LS G + +WGC GH Y ++
Sbjct: 187 DLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYCGVIQVVWGCDQGHDYTMDTSS 246
Query: 63 TCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSP 98
+C+A F DS + P + +T+P
Sbjct: 247 SCKA-------------FLLDSALAVKWPWDKETAP 269
>gi|40805102 zinc finger protein 276 isoform b [Homo sapiens]
Length = 539
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 3 DCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTA 62
D + +S + L LV W H H C +P+L+ LS G + +WGC GH Y ++
Sbjct: 112 DLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYCGVIQVVWGCDQGHDYTMDTSS 171
Query: 63 TCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSP 98
+C+A F DS + P + +T+P
Sbjct: 172 SCKA-------------FLLDSALAVKWPWDKETAP 194
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 52.0 bits (123), Expect = 2e-06
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 426 YALNVWRYWCMTNGLKDHT-----------------DITKIPAVKLNELLENFYVTVKKS 468
Y +N W+ W + T DI A +LN L F + +
Sbjct: 1066 YGVNAWKCWVQSKYANGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRP 1125
Query: 469 DGSDFLATSLHAIRRGLDR-ILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARS 527
+G + S++ + G+ + +L+N + T + + ++L + L +
Sbjct: 1126 NGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLP---- 1181
Query: 528 RNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI 583
N FS +EE +W+ LG SP LL+T++ +N+++ ++T +EH L + ++
Sbjct: 1182 -NNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNV 1236
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 52.0 bits (123), Expect = 2e-06
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 426 YALNVWRYWCMTNGLKDHT-----------------DITKIPAVKLNELLENFYVTVKKS 468
Y +N W+ W + T DI A +LN L F + +
Sbjct: 1066 YGVNAWKCWVQSKYANGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRP 1125
Query: 469 DGSDFLATSLHAIRRGLDR-ILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARS 527
+G + S++ + G+ + +L+N + T + + ++L + L +
Sbjct: 1126 NGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLP---- 1181
Query: 528 RNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI 583
N FS +EE +W+ LG SP LL+T++ +N+++ ++T +EH L + ++
Sbjct: 1182 -NNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNV 1236
>gi|44890068 zinc finger protein 262 [Homo sapiens]
Length = 1548
Score = 52.0 bits (123), Expect = 2e-06
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 22/250 (8%)
Query: 435 CMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGV 494
C +K DI +L+ L F V++ +G + S+ + G+ + L G
Sbjct: 1264 CRVRSIKLKEDILSCTFAELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYLFENGR 1323
Query: 495 GFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPIT 554
+I + +S +L + L + + N FS +EE +W+ LG SPI
Sbjct: 1324 IDNIFTEPYSRFMIELTKLLKIWEPTILP-----NGYMFSRIEEEHLWECKQLGAYSPIV 1378
Query: 555 LLSTVVKYNSQYLNMRTLQEHADLMYGDI----ELLKDPQNQPYF----------ARTD- 599
LL+T++ +N++Y ++ + EH L + + LK Y + D
Sbjct: 1379 LLNTLLFFNTKYFQLKNVTEHLKLSFAHVMRRTRTLKYSTKMTYLRFFPPLQKQESEPDK 1438
Query: 600 -SVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARK 658
+V + R+ V G E++ +CP LY++ + + FYL +
Sbjct: 1439 LTVGKRKRNEDDEVPVGVEMAENTDNPLRCP-VRLYEFYLSKCSESVKQRNDVFYLQPER 1497
Query: 659 EATDMGSVWY 668
+WY
Sbjct: 1498 SCVPNSPMWY 1507
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 50.8 bits (120), Expect = 4e-06
Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 19/286 (6%)
Query: 416 VSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLA 475
+S NT ATRYA+ ++R + D + L +L +FY + G +
Sbjct: 168 LSENTRLATRYAVRIFREYLSEKA--QSPDFETMDKGALCRVLRSFYAEARSKSGQLYSK 225
Query: 476 TSLHAIRRGLDRILKNAGVGFSI---TSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVY 532
+SL +IR L+R L ++ S+ L + L + G + +
Sbjct: 226 SSLISIRSSLNRYLNEPPYCRTLDLTKDPELRSANLTLAAVIRKLEEQGAGPVVQKQAI- 284
Query: 533 FSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQ 592
+ +D +++ + ++P LL+ V Y R + +L L D +
Sbjct: 285 -TRADLRKLYTSSVFSTNTPFGLLNKVWFETCMYFCTRGRENQRELEEDSFGLAMDEDGR 343
Query: 593 PY-FARTDSVKRESRSGSTRVCHGKIYHE------HSRGHKQCPYCLLYKYMYIHRPPTQ 645
+ + ++ +SRS S + E + G + CPY KY+ P +
Sbjct: 344 KFVYFKSLGPYHKSRSSSWSKKRAESSDEENLPRMYETGTEFCPYASFVKYLSKRNPLCK 403
Query: 646 MEAKSPFYLTARKEATDMGSVWYEEQRMGLRSLRGIVPNLAKKVKL 691
F+ R ++ WYE + +G L + L+K KL
Sbjct: 404 -----AFFQRPRDHCSEGDVTWYENKAIGKNLLGTRMQMLSKAAKL 444
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 48.5 bits (114), Expect = 2e-05
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 33/153 (21%)
Query: 538 EEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI--ELLKDPQNQPYF 595
EE +W+ LG SP TLL+T++ +N++Y ++T+ +H L + + + K+P N
Sbjct: 605 EEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTKKNPSN---- 660
Query: 596 ARTDSVKRESRSGSTRVCHGKIYHEHSRGHK-----------------QCPYCLLYKYMY 638
+ ST + + K H G K +CP LY +
Sbjct: 661 ---------PKDKSTSIRYLKALGIHQTGQKVTDDMYAEQTENPENPLRCP-IKLYDFYL 710
Query: 639 IHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQ 671
P + FYLT +WY Q
Sbjct: 711 FKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQ 743
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 48.5 bits (114), Expect = 2e-05
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 33/153 (21%)
Query: 538 EEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI--ELLKDPQNQPYF 595
EE +W+ LG SP TLL+T++ +N++Y ++T+ +H L + + + K+P N
Sbjct: 605 EEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTKKNPSN---- 660
Query: 596 ARTDSVKRESRSGSTRVCHGKIYHEHSRGHK-----------------QCPYCLLYKYMY 638
+ ST + + K H G K +CP LY +
Sbjct: 661 ---------PKDKSTSIRYLKALGIHQTGQKVTDDMYAEQTENPENPLRCP-IKLYDFYL 710
Query: 639 IHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQ 671
P + FYLT +WY Q
Sbjct: 711 FKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQ 743
>gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens]
Length = 519
Score = 40.0 bits (92), Expect = 0.008
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 10 ENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHW 58
+ L LV +H+H CSL+P L+ G G L +W CSAGH + W
Sbjct: 78 KGLQYLVLLSHAHSRECSLVPGLRG--PGGQDGGL--VWECSAGHTFSW 122
>gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens]
Length = 524
Score = 40.0 bits (92), Expect = 0.008
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 10 ENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHW 58
+ L LV +H+H CSL+P L+ G G L +W CSAGH + W
Sbjct: 83 KGLQYLVLLSHAHSRECSLVPGLRG--PGGQDGGL--VWECSAGHTFSW 127
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 38.9 bits (89), Expect = 0.017
Identities = 73/324 (22%), Positives = 123/324 (37%), Gaps = 45/324 (13%)
Query: 99 VERYPGRPVKAKLDCNRTRD-----SCDFSYCSEPSELDETVEEYEDENTLFDMVCESSV 153
V R P RP++ LD D S + E E +E EE +D++ D ES
Sbjct: 1019 VRRRPARPLE--LDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESEN 1076
Query: 154 TDEDSDFEPQTQRPQ---------SIARKRPGVVPSS-------LHSSSQTQMVDECSND 197
DED+ +++ + SI + SS SSS++ +
Sbjct: 1077 DDEDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEE 1136
Query: 198 VIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVT 257
++ + ++E E+ +VA + + A P A S +G + + T
Sbjct: 1137 EVVAREEEEEEEEEEMVAEESMASAGPEDFEQDGEEAALAPGAPAVDS-LGMEEEVDIET 1195
Query: 258 SAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHP 317
A++ E P + P + V + +R PP G +Q+ AM + S P
Sbjct: 1196 EAVAPEERPSMLDEPPLPVG---------VEEPADSREPPEEPGLSQEGAMLL--SPEPP 1244
Query: 318 NKQISI--PLSALQLPGQDEQVASE-EFLSHLPSQ--VSSCEVALSPSVNTEPEVSSSQQ 372
K++ PLS + P D +V E + LP Q + PS EPE + +
Sbjct: 1245 AKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASH 1304
Query: 373 QPPVAPAITTEATAQCIPAYSTKL 396
P++ E A+ P ++ L
Sbjct: 1305 -----PSVPPEPLAEDHPPHTPGL 1323
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.6 bits (83), Expect = 0.083
Identities = 46/180 (25%), Positives = 65/180 (36%), Gaps = 30/180 (16%)
Query: 236 PKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRG 295
P P A P VG+ P + +++ +G A + S P + S PN
Sbjct: 234 PAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE 293
Query: 296 PPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLP-------- 347
P T + +V PV TS SIP+ Q + E+ A+++ S LP
Sbjct: 294 PHLTFPRSFKVPPPTPVRTS------SIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIR 347
Query: 348 --SQV-------SSCEVALSPSVNTEPEVSSSQQQ-------PPVAPAITTEATAQCIPA 391
SQV C L + P + SQ Q PP AP + A PA
Sbjct: 348 PASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPA 407
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.6 bits (83), Expect = 0.083
Identities = 46/180 (25%), Positives = 65/180 (36%), Gaps = 30/180 (16%)
Query: 236 PKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRG 295
P P A P VG+ P + +++ +G A + S P + S PN
Sbjct: 234 PAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE 293
Query: 296 PPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLP-------- 347
P T + +V PV TS SIP+ Q + E+ A+++ S LP
Sbjct: 294 PHLTFPRSFKVPPPTPVRTS------SIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIR 347
Query: 348 --SQV-------SSCEVALSPSVNTEPEVSSSQQQ-------PPVAPAITTEATAQCIPA 391
SQV C L + P + SQ Q PP AP + A PA
Sbjct: 348 PASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPA 407
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 36.6 bits (83), Expect = 0.083
Identities = 46/180 (25%), Positives = 65/180 (36%), Gaps = 30/180 (16%)
Query: 236 PKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRG 295
P P A P VG+ P + +++ +G A + S P + S PN
Sbjct: 234 PAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE 293
Query: 296 PPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLP-------- 347
P T + +V PV TS SIP+ Q + E+ A+++ S LP
Sbjct: 294 PHLTFPRSFKVPPPTPVRTS------SIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIR 347
Query: 348 --SQV-------SSCEVALSPSVNTEPEVSSSQQQ-------PPVAPAITTEATAQCIPA 391
SQV C L + P + SQ Q PP AP + A PA
Sbjct: 348 PASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPA 407
>gi|83776598 virus-induced signaling adapter [Homo sapiens]
Length = 540
Score = 36.6 bits (83), Expect = 0.083
Identities = 77/331 (23%), Positives = 127/331 (38%), Gaps = 56/331 (16%)
Query: 74 FQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDE 133
+Q + SD P P E + P ER PG P A + +SC S P + E
Sbjct: 92 YQSYQPRTSDRPPD---PLEPPSLPAER-PGPPTPAAAH-SIPYNSCREKEPSYPMPVQE 146
Query: 134 TVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPSSLHSSSQTQMVDE 193
T ES E+S+ QT P++I R G L SSS +
Sbjct: 147 T------------QAPESP--GENSEQALQTLSPRAIPRNPDG---GPLESSSDLAALSP 189
Query: 194 CSNDVIIKKIKQEIPEDYYIVANAELTG--GVDGPALSLTQMAKPKPQTHAGPSCVGS-- 249
++ ++ E+ + A + LT G P++S +A+ P+ P GS
Sbjct: 190 LTSSGHQEQ-DTELGSTHTAGATSSLTPSRGPVSPSVSFQPLARSTPRASRLPGPTGSVV 248
Query: 250 ------AKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLAS--PNRGP----- 296
+ P + SA + E G + S + PI+ + + A+ P++ P
Sbjct: 249 STGTSFSSSSPGLASAGAAE----GKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMP 304
Query: 297 --------PGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPS 348
P + V ++P S+ P ++P +AL P + + +PS
Sbjct: 305 VNTVALKVPANPASVSTVPSKLPTSSKPPG---AVPSNALTNPAPSKLPINSTRAGMVPS 361
Query: 349 QVSSCEVALSPSVNTEP-EVSSSQQQPPVAP 378
+V + V S +T P + SS ++ P AP
Sbjct: 362 KVPTSMVLTKVSASTVPTDGSSRNEETPAAP 392
Score = 32.0 bits (71), Expect = 2.1
Identities = 68/271 (25%), Positives = 107/271 (39%), Gaps = 38/271 (14%)
Query: 158 SDFEPQTQRPQSIARKRPGV-VPSSLHSSSQTQMVD-ECSNDVIIKKIKQ-EIPEDYYIV 214
SD P P S+ +RPG P++ HS + E S + +++ + E P +
Sbjct: 100 SDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKEPSYPMPVQETQAPESPGENSEQ 159
Query: 215 ANAELTGGV------DGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHG 268
A L+ GP S + +A P T +G + H A S+ L P
Sbjct: 160 ALQTLSPRAIPRNPDGGPLESSSDLAALSPLTSSGHQEQDTELGSTHTAGATSS-LTPSR 218
Query: 269 MSASPSVISRPIVQKTARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHPNKQISIPLSAL 328
SPSV +P+ + T R AS GP G+ V+ S+S P +
Sbjct: 219 GPVSPSVSFQPLARSTPR---ASRLPGPTGS-----VVSTGTSFSSSSPGLASAGAAEGK 270
Query: 329 QLPGQDE------QVASEEFLSHLPSQVS---------SCEVALSP-SVNTEPEVSSSQQ 372
Q D+ +E + LPS+V + +V +P SV+T P +
Sbjct: 271 QGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTVPSKLPTSS 330
Query: 373 QPPVA---PAITTEATAQCIPAYSTKLNKFP 400
+PP A A+T A ++ +P ST+ P
Sbjct: 331 KPPGAVPSNALTNPAPSK-LPINSTRAGMVP 360
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 36.6 bits (83), Expect = 0.083
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 18/174 (10%)
Query: 226 PALSLTQMAKPKP-QTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRP--IVQ 282
PA S Q P Q+H P V + S + + PH S SP++I P ++Q
Sbjct: 374 PAPSNAQSQHCSPIQSHPSPLTVSPNQSQSAQQSVVVSPPPPHSPSQSPTIIIHPQALIQ 433
Query: 283 KTARVSLA---SPNRGPPGTHGTNQQVAMQMPVSTSHPNKQI----SIPLSALQLPGQDE 335
VS A PN + + +P P + + SAL PGQ
Sbjct: 434 PHPLVSSALQPGPNLQQSTANQVQATAQLNLPSHLPLPASPVVHIGPVQQSALVSPGQ-- 491
Query: 336 QVASEEFLSHLPSQVSSCEVALSPSVNTEPEVS------SSQQQPPVAPAITTE 383
Q+ S + Q S +A P ++T P S Q V P I ++
Sbjct: 492 QIVSPSHQQYSSLQSSPIPIASPPQMSTSPPAQIPPLPLQSMQSLQVQPEILSQ 545
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.11
Identities = 47/168 (27%), Positives = 60/168 (35%), Gaps = 11/168 (6%)
Query: 225 GPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKT 284
GP LS + +A P P PS S + +P S P S + + + P +Q T
Sbjct: 288 GP-LSSSPLATPSPSAPPSPSAPPSLQTLP------SPPATP--PSQATTSLGSPTLQAT 338
Query: 285 ARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLS 344
L SP P T A+ +P + P+ S PLS L P A L
Sbjct: 339 -HSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 397
Query: 345 HLP-SQVSSCEVALSPSVNTEPEVSSSQQQPPVAPAITTEATAQCIPA 391
P S S V S P VS S P AP Q P+
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 445
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 35.8 bits (81), Expect = 0.14
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 29/163 (17%)
Query: 229 SLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSV------ISRPIVQ 282
S + P+ +TH GP ++ L +S P G S S V SR V
Sbjct: 2099 SAAKQRNPETETH-GPQNTAASTLNTDASSVTGLSETPVGASISSEVPLPMAITSRSDVS 2157
Query: 283 KTARVSLASPNRGPPGTHGTNQQVAMQMPVST-------------------SHP--NKQI 321
S A+P+ G + GT + +P S SHP N +
Sbjct: 2158 GLTSESTANPSLGTASSAGTKLTRTISLPTSESLVSFRMNKDPWTVSIPLGSHPTTNTET 2217
Query: 322 SIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTE 364
SIP+++ PG VAS+ + S V+ SPS +TE
Sbjct: 2218 SIPVNSAGPPGL-STVASDVIDTPSDGAESIPTVSFSPSPDTE 2259
Score = 30.0 bits (66), Expect = 7.8
Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 46/231 (19%)
Query: 213 IVANAELTGGVDGPALSLTQMAKPKPQT------HAGPSCVGSAKLIPHVTSAISTELDP 266
+V + + G + A S +A +P+T H G ++ ++P +T +
Sbjct: 11207 LVTSLVTSSGSETSAFSNLTVASSQPETIDSWVAHPGTE---ASSVVPTLTVSTGEPFTN 11263
Query: 267 HGMSASPSVISRPIVQKTARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHPNKQISIPLS 326
+ P+ S + + T+R S + + MP + + P + S +S
Sbjct: 11264 ISLVTHPAESSSTLPRTTSRFSHSELDT---------------MPSTVTSPEAESSSAIS 11308
Query: 327 ALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPAITTEATA 386
PG L+ L + A P+V P S + PA+T+
Sbjct: 11309 TTISPG------IPGVLTSLVTSSGRDISATFPTVPESPHESEATASWVTHPAVTSTTVP 11362
Query: 387 QCIPAYS----------------TKLNKFPVFNINDDLNDLCTSAVSPNTT 421
+ P YS + FP ++ D+ D+ TS V+ + T
Sbjct: 11363 RTTPNYSHSEPDTTPSIATSPGAEATSDFPTITVSPDVPDMVTSQVTSSGT 11413
>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
sapiens]
Length = 1075
Score = 35.8 bits (81), Expect = 0.14
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 250 AKLIPHVTSAISTELDPHGMSASPSVISRPIVQK-TARVSLASPNRGPPGTHGTNQQVAM 308
A L+ ++ A+ T+L + A P+ P V+K +AR + +P P T T
Sbjct: 296 ASLMFEISDALKTQLAKNETLALPAESKTPEVEKISARPTTVTPETVPRSTKPTTSSALD 355
Query: 309 QMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVS 368
+ + K +P + + +D +V L Q ++ +V SP+ + EPE+S
Sbjct: 356 VSETTLASSEKPWIVPTAKIS---EDSKV--------LQPQTATYDVFSSPTTSDEPEIS 404
Query: 369 SS 370
S
Sbjct: 405 DS 406
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 35.4 bits (80), Expect = 0.19
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 154 TDEDSDFEPQTQRPQSIARKRPGVVPSSLHSSSQTQMVDE--CSNDVIIKKIKQEIPED 210
T +D DFE + SI K PG + + H S Q +++D+ C+ +VI+ + +PED
Sbjct: 303 TKDDLDFEIASSYTLSIEAKDPGDLAA--HCSIQVEILDDNDCAPEVIVTSVSTPLPED 359
>gi|20270323 zinc finger protein 653 [Homo sapiens]
Length = 615
Score = 35.4 bits (80), Expect = 0.19
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
Query: 12 LSKLVSWAHSHGTICSLIPNLKHLLSEGSHG-NLTAMWGCSAGHAY----HWPLTATCRA 66
L +V W H C P+L L + + G TA+W C AGH Y H PL +
Sbjct: 123 LKNVVIWYEDHKHRCPYEPHLAEL--DPTFGLYTTAVWQCEAGHRYFQDLHSPLKPLSDS 180
Query: 67 GSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKA 109
+ +SDS S G S+++ SP G+PVKA
Sbjct: 181 DPDSDKVGNGLVAGSSDSSS-SGSASDSEESP----EGQPVKA 218
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 35.4 bits (80), Expect = 0.19
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 154 TDEDSDFEPQTQRPQSIARKRPGVVPSSLHSSSQTQMVDE--CSNDVIIKKIKQEIPED 210
T +D DFE + SI K PG + + H S Q +++D+ C+ +VI+ + +PED
Sbjct: 303 TKDDLDFEIASSYTLSIEAKDPGDLAA--HCSIQVEILDDNDCAPEVIVTSVSTPLPED 359
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 34.3 bits (77), Expect = 0.41
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 8/156 (5%)
Query: 251 KLIPHVTSAISTELDPHGMSASPSVISRPI--VQKTARVSLASPNRGPPGTHGTNQQVAM 308
K P T++ ++ P SP + P + K P P HG+ A
Sbjct: 662 KTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721
Query: 309 QMP----VSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTE 364
Q P +S P K+ S+P + P D++ + + VSS P + +
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS 781
Query: 365 PEVSSSQQQPPVAPAITTEA-TAQCIPAYSTKLNKF 399
+V S ++ P T A +Q P K++ F
Sbjct: 782 -KVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF 816
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 34.3 bits (77), Expect = 0.41
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 8/156 (5%)
Query: 251 KLIPHVTSAISTELDPHGMSASPSVISRPI--VQKTARVSLASPNRGPPGTHGTNQQVAM 308
K P T++ ++ P SP + P + K P P HG+ A
Sbjct: 662 KTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721
Query: 309 QMP----VSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTE 364
Q P +S P K+ S+P + P D++ + + VSS P + +
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS 781
Query: 365 PEVSSSQQQPPVAPAITTEA-TAQCIPAYSTKLNKF 399
+V S ++ P T A +Q P K++ F
Sbjct: 782 -KVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF 816
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 33.9 bits (76), Expect = 0.54
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 161 EPQTQRPQSIARKRPGVVPSSLHSSSQTQMVDECSNDVIIKKIKQE---IPEDYYIVANA 217
+P TQ P S+ ++ G PSS Q+V +I + ++ +P+ I + +
Sbjct: 744 QPSTQVPPSVIQQ--GAPPSS-------QVVPPAQTGIIHQGVQTSAPSLPQQLVIASQS 794
Query: 218 ELTG------GVDGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSA 271
L GV+ A + P + S + VTS +S+ P GM +
Sbjct: 795 SLLTVPPQPQGVEPVAQGIVSQQLPAVSSLPSASSIS-------VTSQVSST-GPSGMPS 846
Query: 272 SPSVISRPIVQKTARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLP 331
+P+ + P Q A+ P +G Q Q P+ ++ N +PL A Q+P
Sbjct: 847 APTNLVPP--QNIAQT--------PATQNGNLVQSVSQPPLIATNTN----LPL-AQQIP 891
Query: 332 GQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSS 369
Q +++ + SQ+ A PS+ P+ S
Sbjct: 892 LSSTQFSAQSLAQAIGSQIEDARRAAEPSLVGLPQTIS 929
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 33.5 bits (75), Expect = 0.71
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 37/210 (17%)
Query: 162 PQTQRPQ-SIARKRPGVVPSSLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELT 220
P T R S ++PG +PSSL +D+ + ++K E+ +L
Sbjct: 379 PNTPRQNTSTPVRKPGPLPSSL-------------DDLKVSELKTEL----------KLR 415
Query: 221 G-GVDGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRP 279
G V G L + KP + ++ G I V+S+ +P A P
Sbjct: 416 GLPVSGTKPDLIERLKPYQEVNSSGLAAGG---IVAVSSSAIVTSNPEVTVALPVTTLHN 472
Query: 280 IVQKTARVSLASPNRGPPGTHGTN--QQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQV 337
V T+ VS P GT + V +P+S S P++Q S+ + ++
Sbjct: 473 TV--TSSVSTLKAELPPTGTSNATRVENVHSPLPISPS-PSEQSSLSTDDTNMADTFTEI 529
Query: 338 AS----EEFLSHLPSQVSSCEVALSPSVNT 363
+ +FLS P ++++ E +LSP+ +T
Sbjct: 530 MTMMSPSQFLSSSPLRMTNNEDSLSPTSST 559
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 33.5 bits (75), Expect = 0.71
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 16/134 (11%)
Query: 244 PSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTHGTN 303
P GS KL P A HG A P + I+ + + G PG GT
Sbjct: 1076 PLVTGSPKLPPRGVGA-----GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTP 1130
Query: 304 QQVAMQMPVSTS--------HPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEV 355
++ P S+S HP + I + +QL Q ++ ++ L + C V
Sbjct: 1131 GLEQVRTPTSSSGAPPPDEIHP---LEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAV 1187
Query: 356 ALSPSVNTEPEVSS 369
S + N + E+ S
Sbjct: 1188 GASGAQNGDSELGS 1201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,195,581
Number of Sequences: 37866
Number of extensions: 1377018
Number of successful extensions: 4741
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 4641
Number of HSP's gapped (non-prelim): 198
length of query: 716
length of database: 18,247,518
effective HSP length: 109
effective length of query: 607
effective length of database: 14,120,124
effective search space: 8570915268
effective search space used: 8570915268
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.