Guide to the Human Genome
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Search of human proteins with 54292110

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54292110 deleted in azoospermia 3 [Homo sapiens]
         (438 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54292110 deleted in azoospermia 3 [Homo sapiens]                   934   0.0  
gi|54292105 deleted in azoospermia 2 isoform 2 [Homo sapiens]         867   0.0  
gi|189181654 deleted in azoospermia [Homo sapiens]                    845   0.0  
gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]         845   0.0  
gi|11036660 deleted in azoospermia 2 isoform 1 [Homo sapiens]         833   0.0  
gi|32698734 deleted in azoospermia 4 isoform 2 [Homo sapiens]         783   0.0  
gi|54292107 deleted in azoospermia 2 isoform 3 [Homo sapiens]         679   0.0  
gi|25121978 deleted in azoospermia-like [Homo sapiens]                328   6e-90
gi|14719414 boule isoform 2 [Homo sapiens]                             98   2e-20
gi|37574731 boule isoform 1 [Homo sapiens]                             98   2e-20
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]      57   3e-08
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]      57   3e-08
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]      57   3e-08
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]       57   3e-08
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]       54   3e-07
gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]      54   3e-07
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          54   4e-07
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]      54   4e-07
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]        54   4e-07
gi|34303937 RNA binding motif protein, Y-linked, family 1, membe...    54   4e-07
gi|56090529 RNA binding motif protein, Y-linked, family 1, membe...    54   4e-07
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]        53   5e-07
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]        53   5e-07
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]        53   5e-07
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]      53   5e-07
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa...    53   6e-07
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap...    53   6e-07
gi|4826974 RNA binding motif protein, Y-linked, family 1, member...    53   6e-07
gi|56090527 RNA binding motif protein, Y-linked, family 1, membe...    53   6e-07
gi|54633344 RNA binding motif protein, Y-linked, family 1, membe...    53   6e-07

>gi|54292110 deleted in azoospermia 3 [Homo sapiens]
          Length = 438

 Score =  934 bits (2413), Expect = 0.0
 Identities = 438/438 (100%), Positives = 438/438 (100%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180

Query: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
           GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240

Query: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300
           PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300

Query: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAF 360
           GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAF
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAF 360

Query: 361 PAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNL 420
           PAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNL
Sbjct: 361 PAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNL 420

Query: 421 WTEAYKWWYLVCLIQRRD 438
           WTEAYKWWYLVCLIQRRD
Sbjct: 421 WTEAYKWWYLVCLIQRRD 438


>gi|54292105 deleted in azoospermia 2 isoform 2 [Homo sapiens]
          Length = 534

 Score =  867 bits (2239), Expect = 0.0
 Identities = 427/534 (79%), Positives = 431/534 (80%), Gaps = 96/534 (17%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180

Query: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQ-------------------------- 214
           GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQ                          
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240

Query: 215 ----------------------PFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 252
                                 PFPAYP SPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300

Query: 253 GYQFPVYNYQAFPAYPNSPV---------------------------------------- 272
           GYQFPVYNYQAFPAYPNSPV                                        
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAF 360

Query: 273 --------QVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTT 324
                   QVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTT
Sbjct: 361 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 420

Query: 325 GYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAF 384
           GYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAF
Sbjct: 421 GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAF 480

Query: 385 PAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 438
           PAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD
Sbjct: 481 PAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 534


>gi|189181654 deleted in azoospermia [Homo sapiens]
          Length = 744

 Score =  845 bits (2184), Expect = 0.0
 Identities = 403/437 (92%), Positives = 405/437 (92%), Gaps = 24/437 (5%)

Query: 2   SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
           SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 332 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 391

Query: 62  RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
           RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 392 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 451

Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 181
           RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG
Sbjct: 452 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 511

Query: 182 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 241
           CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP
Sbjct: 512 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 571

Query: 242 AYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATG 301
           AYPNSPFQVATGYQFPVYNYQ FPAYP+SP QVT GYQLPVYNYQAFPAYPNSPFQVATG
Sbjct: 572 AYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATG 631

Query: 302 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFP 361
           YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAFP
Sbjct: 632 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 691

Query: 362 AYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLW 421
           AYPNS VQVTTGYQ  VY                        NYQMPPQCPVGEQRRNLW
Sbjct: 692 AYPNSAVQVTTGYQFHVY------------------------NYQMPPQCPVGEQRRNLW 727

Query: 422 TEAYKWWYLVCLIQRRD 438
           TEAYKWWYLVCLIQRRD
Sbjct: 728 TEAYKWWYLVCLIQRRD 744



 Score =  347 bits (889), Expect = 2e-95
 Identities = 170/180 (94%), Positives = 174/180 (96%), Gaps = 1/180 (0%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P   I+
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 179



 Score =  345 bits (884), Expect = 6e-95
 Identities = 169/179 (94%), Positives = 173/179 (96%), Gaps = 1/179 (0%)

Query: 2   SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
           SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 167 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 226

Query: 62  RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
           RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 227 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 286

Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P   I+
Sbjct: 287 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 344


>gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]
          Length = 579

 Score =  845 bits (2184), Expect = 0.0
 Identities = 403/437 (92%), Positives = 405/437 (92%), Gaps = 24/437 (5%)

Query: 2   SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
           SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 167 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 226

Query: 62  RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
           RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 227 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 286

Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 181
           RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG
Sbjct: 287 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 346

Query: 182 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 241
           CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP
Sbjct: 347 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 406

Query: 242 AYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATG 301
           AYPNSPFQVATGYQFPVYNYQ FPAYP+SP QVT GYQLPVYNYQAFPAYPNSPFQVATG
Sbjct: 407 AYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATG 466

Query: 302 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFP 361
           YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAFP
Sbjct: 467 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 526

Query: 362 AYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLW 421
           AYPNS VQVTTGYQ  VY                        NYQMPPQCPVGEQRRNLW
Sbjct: 527 AYPNSAVQVTTGYQFHVY------------------------NYQMPPQCPVGEQRRNLW 562

Query: 422 TEAYKWWYLVCLIQRRD 438
           TEAYKWWYLVCLIQRRD
Sbjct: 563 TEAYKWWYLVCLIQRRD 579



 Score =  347 bits (889), Expect = 2e-95
 Identities = 170/180 (94%), Positives = 174/180 (96%), Gaps = 1/180 (0%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P   I+
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 179


>gi|11036660 deleted in azoospermia 2 isoform 1 [Homo sapiens]
          Length = 558

 Score =  833 bits (2151), Expect = 0.0
 Identities = 394/412 (95%), Positives = 398/412 (96%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180

Query: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
           GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240

Query: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300
           PAYPNSPFQVATGYQFPVYNYQ FPAYP+SP QVT GYQLPVYNYQAFPAYPNSPFQVAT
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300

Query: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAF 360
           GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAF
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAF 360

Query: 361 PAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 412
           PAYP+SP QVTTGYQLPVYNYQAFPAYP+S  QVTTGYQ  VYNYQ  P  P
Sbjct: 361 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 412



 Score =  530 bits (1364), Expect = e-150
 Identities = 241/273 (88%), Positives = 251/273 (91%)

Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQ 225
           QA+ AYP+SP QV TG Q  VYNYQ +P YP+S  QVTTGYQLPVYNYQ FPAYP SPFQ
Sbjct: 286 QAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQ 345

Query: 226 VTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNY 285
           VT GYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNY
Sbjct: 346 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 405

Query: 286 QAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQ 345
           QAFPAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYP+SPFQ
Sbjct: 406 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQ 465

Query: 346 VATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNY 405
           V TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNY
Sbjct: 466 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNY 525

Query: 406 QMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 438
           QMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD
Sbjct: 526 QMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 558


>gi|32698734 deleted in azoospermia 4 isoform 2 [Homo sapiens]
          Length = 390

 Score =  783 bits (2023), Expect = 0.0
 Identities = 380/438 (86%), Positives = 381/438 (86%), Gaps = 48/438 (10%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180

Query: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
           GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240

Query: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300
           PAYPNSPFQVATGYQFPVYNYQ FPAYP+SP QVT GYQLPVYNYQAFPAYPNSPFQVAT
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300

Query: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAF 360
           GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNS  QV TGYQF VYNYQ  
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMP 360

Query: 361 PAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNL 420
           P                                                QCPVGEQRRNL
Sbjct: 361 P------------------------------------------------QCPVGEQRRNL 372

Query: 421 WTEAYKWWYLVCLIQRRD 438
           WTEAYKWWYLVCLIQRRD
Sbjct: 373 WTEAYKWWYLVCLIQRRD 390


>gi|54292107 deleted in azoospermia 2 isoform 3 [Homo sapiens]
          Length = 366

 Score =  679 bits (1753), Expect = 0.0
 Identities = 323/340 (95%), Positives = 326/340 (95%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
           GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180

Query: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
           GCQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240

Query: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300
           PAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYP+SPFQV T
Sbjct: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300

Query: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP 340
           GYQ PVYNYQAFPAYPNS VQVTTGYQ  VYNYQ  P  P
Sbjct: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340



 Score =  389 bits (1000), Expect = e-108
 Identities = 176/201 (87%), Positives = 184/201 (91%)

Query: 238 QAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQ 297
           QA+ AYP+SP QV TG Q  VYNYQ +P YP+SP QVTTGYQLPVYNYQ FPAYP+SPFQ
Sbjct: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225

Query: 298 VATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNY 357
           V  GYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNY
Sbjct: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285

Query: 358 QAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 417
           QAFPAYP+SP QVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR
Sbjct: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 345

Query: 418 RNLWTEAYKWWYLVCLIQRRD 438
           RNLWTEAYKWWYLVCLIQRRD
Sbjct: 346 RNLWTEAYKWWYLVCLIQRRD 366


>gi|25121978 deleted in azoospermia-like [Homo sapiens]
          Length = 295

 Score =  328 bits (841), Expect = 6e-90
 Identities = 162/196 (82%), Positives = 172/196 (87%)

Query: 1   MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           MS ANPETPNSTISREASTQSSSAA SQG++LPEGKI+PNTVFVGGID RMDETEI S F
Sbjct: 1   MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF 60

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
            RYGSVKEVKIIT+RTGVSKGYGFVSF NDVDVQKIV SQI+FHGKKLKLGPAIRKQ LC
Sbjct: 61  ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC 120

Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
           A HVQPRPLV N PPPPQFQNVW NPNTETY+QP  T NP+TQ+VQAY  YP+SP QVIT
Sbjct: 121 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT 180

Query: 181 GCQLLVYNYQEYPTYP 196
           G QL VYNYQ  P +P
Sbjct: 181 GYQLPVYNYQMPPQWP 196



 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 46/101 (45%), Positives = 53/101 (52%), Gaps = 13/101 (12%)

Query: 328 LPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSP--VQVTTGYQLPVYNY-QAF 384
           L  Y+ Q  P   N P         P   +Q     PN+   +Q TT    P+  Y QA+
Sbjct: 119 LCAYHVQPRPLVFNHP---------PPPQFQNVWTNPNTETYMQPTTTMN-PITQYVQAY 168

Query: 385 PAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAY 425
           P YPNS VQV TGYQ  VYNYQMPPQ PVGEQR  +   AY
Sbjct: 169 PTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAY 209



 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 37/87 (42%), Positives = 44/87 (50%), Gaps = 11/87 (12%)

Query: 208 LPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSP-FQVATGYQFPVYNY-QAFP 265
           L  Y+ QP P     P         P   +Q     PN+  +   T    P+  Y QA+P
Sbjct: 119 LCAYHVQPRPLVFNHP---------PPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYP 169

Query: 266 AYPNSPVQVTTGYQLPVYNYQAFPAYP 292
            YPNSPVQV TGYQLPVYNYQ  P +P
Sbjct: 170 TYPNSPVQVITGYQLPVYNYQMPPQWP 196



 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 8/67 (11%)

Query: 282 VYNYQAFPAYPN-------SPFQVATGYQFPVYNY-QAFPAYPNSPVQVTTGYQLPVYNY 333
           V+N+   P + N         +   T    P+  Y QA+P YPNSPVQV TGYQLPVYNY
Sbjct: 130 VFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGYQLPVYNY 189

Query: 334 QAFPAYP 340
           Q  P +P
Sbjct: 190 QMPPQWP 196



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 44/88 (50%), Gaps = 13/88 (14%)

Query: 232 LPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSP--VQVTTGYQLPVYNY-QAF 288
           L  Y+ Q  P   N P         P   +Q     PN+   +Q TT    P+  Y QA+
Sbjct: 119 LCAYHVQPRPLVFNHP---------PPPQFQNVWTNPNTETYMQPTTTMN-PITQYVQAY 168

Query: 289 PAYPNSPFQVATGYQFPVYNYQAFPAYP 316
           P YPNSP QV TGYQ PVYNYQ  P +P
Sbjct: 169 PTYPNSPVQVITGYQLPVYNYQMPPQWP 196



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 44/88 (50%), Gaps = 13/88 (14%)

Query: 280 LPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSP--VQVTTGYQLPVYNY-QAF 336
           L  Y+ Q  P   N P         P   +Q     PN+   +Q TT    P+  Y QA+
Sbjct: 119 LCAYHVQPRPLVFNHP---------PPPQFQNVWTNPNTETYMQPTTTMN-PITQYVQAY 168

Query: 337 PAYPNSPFQVATGYQFPVYNYQAFPAYP 364
           P YPNSP QV TGYQ PVYNYQ  P +P
Sbjct: 169 PTYPNSPVQVITGYQLPVYNYQMPPQWP 196


>gi|14719414 boule isoform 2 [Homo sapiens]
          Length = 283

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)

Query: 35  GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
           G ++PN +FVGGID + +E+++   F +YGSVKEVKI+ +R GVSKGYGFV+F    D Q
Sbjct: 28  GTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQ 87

Query: 95  KIV--GSQIHFHGKKLKLGPAIRKQKL 119
           KI+    ++++  KKL +GPAIRKQ++
Sbjct: 88  KILQEAEKLNYKDKKLNIGPAIRKQQV 114


>gi|37574731 boule isoform 1 [Homo sapiens]
          Length = 295

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)

Query: 35  GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
           G ++PN +FVGGID + +E+++   F +YGSVKEVKI+ +R GVSKGYGFV+F    D Q
Sbjct: 40  GTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQ 99

Query: 95  KIV--GSQIHFHGKKLKLGPAIRKQKL 119
           KI+    ++++  KKL +GPAIRKQ++
Sbjct: 100 KILQEAEKLNYKDKKLNIGPAIRKQQV 126


>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
          Length = 450

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 2   SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           S+ +P T N +++ E   Q+    + +Q     E K  P  + V  I  R  + ++   F
Sbjct: 142 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 201

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 202 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 258

Query: 117 QKLCARHVQP 126
                + V P
Sbjct: 259 VMTNKKMVTP 268


>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
          Length = 370

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 2   SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           S+ +P T N +++ E   Q+    + +Q     E K  P  + V  I  R  + ++   F
Sbjct: 72  SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188

Query: 117 QKLCARHVQP 126
                + V P
Sbjct: 189 VMTNKKMVTP 198


>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
          Length = 376

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 2   SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           S+ +P T N +++ E   Q+    + +Q     E K  P  + V  I  R  + ++   F
Sbjct: 72  SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188

Query: 117 QKLCARHVQP 126
                + V P
Sbjct: 189 VMTNKKMVTP 198


>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
          Length = 380

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 2   SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
           S+ +P T N +++ E   Q+    + +Q     E K  P  + V  I  R  + ++   F
Sbjct: 72  SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188

Query: 117 QKLCARHVQP 126
                + V P
Sbjct: 189 VMTNKKMVTP 198


>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
          Length = 370

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 28/193 (14%)

Query: 7   ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
           +T   T+S  A TQ+  AA + G          E K  P  + V  I  R  + ++   F
Sbjct: 79  DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 137

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 138 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 194

Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWR-NPNTETYLQPQITPNPVTQHVQAYSAYPHSP 175
                  V      VNP     + N W+ NP       P+    P   +  A +A  +  
Sbjct: 195 -------VMTNKKTVNP-----YTNGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAAYR- 241

Query: 176 GQVITGCQLLVYN 188
           G  + G    VYN
Sbjct: 242 GAHLRGRGRTVYN 254


>gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
          Length = 631

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 36  KIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQK 95
           K  PN V++      MD+  +   FG++G    VK++T+ +G SKG+GFVSF    D QK
Sbjct: 188 KEFPN-VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246

Query: 96  IVGSQ--IHFHGKKLKLGPAIRK 116
            V        +GK++ +G A +K
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKK 269



 Score = 33.5 bits (75), Expect = 0.39
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIV 97
           ++V  +D  +D+  +   F  +G++   K++    G SKG+GFV F +  +  K V
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAV 350



 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQ- 100
           +FV  +D  ++   +      +G++    ++ +  G SKGYGFV F      ++ +    
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMN 159

Query: 101 -IHFHGKKLKLG 111
            +  +G+K+ +G
Sbjct: 160 GMLLNGRKVFVG 171


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 73/273 (26%), Positives = 104/273 (38%), Gaps = 43/273 (15%)

Query: 40  NTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVG 98
           N +FVGGI     ETE+   F ++G V EV +I +      +G+GF++F ++  V + V 
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV- 171

Query: 99  SQIHFH---GKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQ-- 153
             +HFH   GKK+++  A  +        QP          P   N W      T+ Q  
Sbjct: 172 -NMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGY 230

Query: 154 -PQITPNPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTT---GYQLP 209
            PQ    P  Q +  Y   P   G                P  P +++ V+T   G+  P
Sbjct: 231 GPQGMWVPAGQAIGGYGPPPAGRG-------------APPPPPPFTSYIVSTPPGGFPPP 277

Query: 210 VYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPN 269
               Q FP    +P Q + GY  P      F A P  P   AT    P+       A+P 
Sbjct: 278 ----QGFPQGYGAPPQFSFGYGPPPPPPDQF-APPGVPPPPATPGAAPL-------AFPP 325

Query: 270 SPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGY 302
            P Q       P        A P+ P+    GY
Sbjct: 326 PPSQAAPDMSKPP------TAQPDFPYGQYAGY 352



 Score = 39.3 bits (90), Expect = 0.007
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100
           +FVGG+D    +  + S F +YG V +  I+ ++ T  S+G+GFV F +   V  ++ S+
Sbjct: 12  LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71

Query: 101 IH 102
            H
Sbjct: 72  PH 73


>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
          Length = 451

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 2   SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
           S+ +P T N ++++     +   Q S   +S+     E K  P  + V  I  R  + ++
Sbjct: 142 SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 198

Query: 57  GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
              FG++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  
Sbjct: 199 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 255

Query: 113 AIRKQKLCARHVQP 126
           A  +     + V P
Sbjct: 256 ATARVMTNKKMVTP 269


>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
          Length = 367

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 2   SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
           S+ +P T N ++++     +   Q S   +S+     E K  P  + V  I  R  + ++
Sbjct: 72  SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 128

Query: 57  GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
              FG++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  
Sbjct: 129 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 185

Query: 113 AIRKQKLCARHVQP 126
           A  +     + V P
Sbjct: 186 ATARVMTNKKMVTP 199


>gi|34303937 RNA binding motif protein, Y-linked, family 1, member F
           [Homo sapiens]
          Length = 496

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
           P  +F+GG++   +E  + + FG++G + EV +I +RT  S+G+ F++F N  D +    
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66

Query: 99  SQ--IHFHGKKLKLGPA 113
                  HGK +K+  A
Sbjct: 67  DMNGTSLHGKAIKVEQA 83


>gi|56090529 RNA binding motif protein, Y-linked, family 1, member J
           [Homo sapiens]
          Length = 496

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
           P  +F+GG++   +E  + + FG++G + EV +I +RT  S+G+ F++F N  D +    
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66

Query: 99  SQ--IHFHGKKLKLGPA 113
                  HGK +K+  A
Sbjct: 67  DMNGTSLHGKAIKVEQA 83


>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
          Length = 395

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 68/251 (27%), Positives = 101/251 (40%), Gaps = 46/251 (18%)

Query: 7   ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
           +T   T+S  A TQ+  AA + G          E K  P  + V  I  R  + ++   F
Sbjct: 99  DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214

Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWR-NPNTETYLQPQITPNPV--TQHVQAYSAYPH 173
                  V      VNP     + N W+ NP       P+     V   Q  Q  S+   
Sbjct: 215 -------VMTNKKTVNP-----YTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYS 262

Query: 174 SPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQ--------LPVYN-YQPFPAYPRSPF 224
           +P         LVY     P +P  A      Y+          VYN ++     P  P 
Sbjct: 263 APSS-------LVYT-SAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPA 314

Query: 225 QVTAGYQLPVY 235
                YQ PVY
Sbjct: 315 YGGVVYQEPVY 325


>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
          Length = 392

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 68/251 (27%), Positives = 101/251 (40%), Gaps = 46/251 (18%)

Query: 7   ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
           +T   T+S  A TQ+  AA + G          E K  P  + V  I  R  + ++   F
Sbjct: 99  DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214

Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWR-NPNTETYLQPQITPNPV--TQHVQAYSAYPH 173
                  V      VNP     + N W+ NP       P+     V   Q  Q  S+   
Sbjct: 215 -------VMTNKKTVNP-----YTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYS 262

Query: 174 SPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQ--------LPVYN-YQPFPAYPRSPF 224
           +P         LVY     P +P  A      Y+          VYN ++     P  P 
Sbjct: 263 APSS-------LVYT-SAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPA 314

Query: 225 QVTAGYQLPVY 235
                YQ PVY
Sbjct: 315 YGGVVYQEPVY 325


>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
          Length = 418

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 68/251 (27%), Positives = 101/251 (40%), Gaps = 46/251 (18%)

Query: 7   ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
           +T   T+S  A TQ+  AA + G          E K  P  + V  I  R  + ++   F
Sbjct: 99  DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157

Query: 61  GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
           G++G + +V+II N  G SKG+GFV+F N  D     +K+ G+ +   G+K+++  A  +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214

Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWR-NPNTETYLQPQITPNPV--TQHVQAYSAYPH 173
                  V      VNP     + N W+ NP       P+     V   Q  Q  S+   
Sbjct: 215 -------VMTNKKTVNP-----YTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYS 262

Query: 174 SPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQ--------LPVYN-YQPFPAYPRSPF 224
           +P         LVY     P +P  A      Y+          VYN ++     P  P 
Sbjct: 263 APSS-------LVYT-SAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPA 314

Query: 225 QVTAGYQLPVY 235
                YQ PVY
Sbjct: 315 YGGVVYQEPVY 325


>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
          Length = 636

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQ- 100
           V++      MD+  +   FG++G    VK++T+ +G SKG+GFVSF    D QK V    
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

Query: 101 -IHFHGKKLKLGPAIRK 116
               +GK++ +G A +K
Sbjct: 253 GKELNGKQIYVGRAQKK 269



 Score = 36.2 bits (82), Expect = 0.060
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
           +F+  +D  +D   +   F  +G++   K++ +  G SKGYGFV F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 145



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 34/158 (21%)

Query: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQI 101
           ++V  +D  +D+  +   F  +G++   K++    G SKG+GFV F +  +  K V    
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAV---T 351

Query: 102 HFHG-----KKLKLGPAIRK------------QKLCARHVQPRPLVVNP--PPPPQFQNV 142
             +G     K L +  A RK            Q++ +    P P V+NP  P PP    +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP-VINPYQPAPPSGYFM 410

Query: 143 WRNPNTE---TYLQP----QITPNPVTQHVQAYSAYPH 173
              P T+    Y  P    Q+ P+P      A  A PH
Sbjct: 411 AAIPQTQNRAAYYPPSQIAQLRPSP---RWTAQGARPH 445


>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97
           P  +F+GG++   +E  + + FG+YG + EV +I +R T  S+G+ FV+F +  D +   
Sbjct: 7   PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66

Query: 98  GSQ--IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQ 138
                    GK +K+  A +      RH         PPPPP+
Sbjct: 67  RDMNGKSLDGKAIKVEQATKPSFERGRH--------GPPPPPR 101


>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97
           P  +F+GG++   +E  + + FG+YG + EV +I +R T  S+G+ FV+F +  D +   
Sbjct: 7   PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66

Query: 98  GSQ--IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQ 138
                    GK +K+  A +      RH         PPPPP+
Sbjct: 67  RDMNGKSLDGKAIKVEQATKPSFERGRH--------GPPPPPR 101


>gi|4826974 RNA binding motif protein, Y-linked, family 1, member A1
           [Homo sapiens]
          Length = 496

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
           P  +F+GG++   +E  + + FG++G + EV +I +RT  S+G+ F++F N  D +    
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66

Query: 99  SQ--IHFHGKKLKLGPA 113
                  HGK +K+  A
Sbjct: 67  DMNGKSLHGKAIKVEQA 83


>gi|56090527 RNA binding motif protein, Y-linked, family 1, member E
           [Homo sapiens]
          Length = 496

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
           P  +F+GG++   +E  + + FG++G + EV +I +RT  S+G+ F++F N  D +    
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66

Query: 99  SQ--IHFHGKKLKLGPA 113
                  HGK +K+  A
Sbjct: 67  DMNGKSLHGKAIKVEQA 83


>gi|54633344 RNA binding motif protein, Y-linked, family 1, member B
           [Homo sapiens]
          Length = 496

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 39  PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
           P  +F+GG++   +E  + + FG++G + EV +I +RT  S+G+ F++F N  D +    
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66

Query: 99  SQ--IHFHGKKLKLGPA 113
                  HGK +K+  A
Sbjct: 67  DMNGKSLHGKAIKVEQA 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,748,151
Number of Sequences: 37866
Number of extensions: 1013660
Number of successful extensions: 4005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 3213
Number of HSP's gapped (non-prelim): 598
length of query: 438
length of database: 18,247,518
effective HSP length: 105
effective length of query: 333
effective length of database: 14,271,588
effective search space: 4752438804
effective search space used: 4752438804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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