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Search of human proteins with 54292107
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54292107 deleted in azoospermia 2 isoform 3 [Homo sapiens]
(366 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54292107 deleted in azoospermia 2 isoform 3 [Homo sapiens] 777 0.0
gi|32698734 deleted in azoospermia 4 isoform 2 [Homo sapiens] 749 0.0
gi|189181654 deleted in azoospermia [Homo sapiens] 740 0.0
gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens] 740 0.0
gi|11036660 deleted in azoospermia 2 isoform 1 [Homo sapiens] 679 0.0
gi|54292110 deleted in azoospermia 3 [Homo sapiens] 679 0.0
gi|54292105 deleted in azoospermia 2 isoform 2 [Homo sapiens] 679 0.0
gi|25121978 deleted in azoospermia-like [Homo sapiens] 328 5e-90
gi|14719414 boule isoform 2 [Homo sapiens] 99 8e-21
gi|37574731 boule isoform 1 [Homo sapiens] 99 8e-21
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens] 57 3e-08
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens] 57 3e-08
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens] 57 3e-08
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens] 57 3e-08
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens] 56 6e-08
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens] 55 8e-08
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 55 1e-07
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens] 55 1e-07
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens] 55 1e-07
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 55 1e-07
gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens] 54 2e-07
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens] 54 3e-07
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens] 54 3e-07
gi|34303937 RNA binding motif protein, Y-linked, family 1, membe... 54 3e-07
gi|56090529 RNA binding motif protein, Y-linked, family 1, membe... 54 3e-07
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 53 4e-07
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 53 5e-07
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 53 5e-07
gi|4826974 RNA binding motif protein, Y-linked, family 1, member... 53 5e-07
gi|56090527 RNA binding motif protein, Y-linked, family 1, membe... 53 5e-07
>gi|54292107 deleted in azoospermia 2 isoform 3 [Homo sapiens]
Length = 366
Score = 777 bits (2007), Expect = 0.0
Identities = 366/366 (100%), Positives = 366/366 (100%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
Query: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
Query: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300
PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT
Sbjct: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300
Query: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVC 360
GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVC
Sbjct: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVC 360
Query: 361 LIQRRD 366
LIQRRD
Sbjct: 361 LIQRRD 366
>gi|32698734 deleted in azoospermia 4 isoform 2 [Homo sapiens]
Length = 390
Score = 749 bits (1934), Expect = 0.0
Identities = 358/390 (91%), Positives = 360/390 (92%), Gaps = 24/390 (6%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
Query: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
GCQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
Query: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPF---- 296
PAYP+SPFQV TGYQ PVYNYQ FPAYPSSPFQVT GYQLPVYNYQAFPAYP+SPF
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300
Query: 297 --------------------QVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMP 336
QVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMP
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMP 360
Query: 337 PQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 366
PQCPVGEQRRNLWTEAYKWWYLVCLIQRRD
Sbjct: 361 PQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 390
>gi|189181654 deleted in azoospermia [Homo sapiens]
Length = 744
Score = 740 bits (1911), Expect = 0.0
Identities = 361/413 (87%), Positives = 362/413 (87%), Gaps = 48/413 (11%)
Query: 2 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 332 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 391
Query: 62 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 392 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 451
Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 181
RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG
Sbjct: 452 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 511
Query: 182 CQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFP 241
CQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAFP
Sbjct: 512 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 571
Query: 242 AYP------------------------SSPFQVTTGYQLPVYNYQAFPAYPSSPF----- 272
AYP SSPFQVT GYQLPVYNYQAFPAYP+SPF
Sbjct: 572 AYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATG 631
Query: 273 -------------------QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 313
QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP
Sbjct: 632 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 691
Query: 314 AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 366
AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD
Sbjct: 692 AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 744
Score = 347 bits (889), Expect = 1e-95
Identities = 170/180 (94%), Positives = 174/180 (96%), Gaps = 1/180 (0%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P I+
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 179
Score = 345 bits (884), Expect = 5e-95
Identities = 169/179 (94%), Positives = 173/179 (96%), Gaps = 1/179 (0%)
Query: 2 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 167 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 226
Query: 62 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 227 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 286
Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P I+
Sbjct: 287 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 344
>gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]
Length = 579
Score = 740 bits (1911), Expect = 0.0
Identities = 361/413 (87%), Positives = 362/413 (87%), Gaps = 48/413 (11%)
Query: 2 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 61
SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG
Sbjct: 167 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFG 226
Query: 62 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 121
RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA
Sbjct: 227 RYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCA 286
Query: 122 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 181
RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG
Sbjct: 287 RHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITG 346
Query: 182 CQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFP 241
CQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAFP
Sbjct: 347 CQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFP 406
Query: 242 AYP------------------------SSPFQVTTGYQLPVYNYQAFPAYPSSPF----- 272
AYP SSPFQVT GYQLPVYNYQAFPAYP+SPF
Sbjct: 407 AYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATG 466
Query: 273 -------------------QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 313
QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP
Sbjct: 467 YQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFP 526
Query: 314 AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 366
AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD
Sbjct: 527 AYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD 579
Score = 347 bits (889), Expect = 1e-95
Identities = 170/180 (94%), Positives = 174/180 (96%), Gaps = 1/180 (0%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ+ +A P +P I+
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQS-AANPETPNSTIS 179
>gi|11036660 deleted in azoospermia 2 isoform 1 [Homo sapiens]
Length = 558
Score = 679 bits (1753), Expect = 0.0
Identities = 323/340 (95%), Positives = 325/340 (95%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
Query: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
GCQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
Query: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300
PAYP+SPFQV TGYQ PVYNYQ FPAYPSSPFQVT GYQLPVYNYQAFPAYP+SPFQV T
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300
Query: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
GYQ PVYNYQAFPAYPNS VQVTTGYQ VYNYQ P P
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP 340
Score = 409 bits (1052), Expect = e-114
Identities = 188/201 (93%), Positives = 190/201 (94%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP SP QV TG QL VYNYQ +P YP SPFQVTTGYQLPVYNYQ FPAYPSSPFQ
Sbjct: 358 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQ 417
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
VT GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 418 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 477
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 345
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR
Sbjct: 478 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 537
Query: 346 RNLWTEAYKWWYLVCLIQRRD 366
RNLWTEAYKWWYLVCLIQRRD
Sbjct: 538 RNLWTEAYKWWYLVCLIQRRD 558
Score = 323 bits (827), Expect = 2e-88
Identities = 151/175 (86%), Positives = 156/175 (89%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP+SP QV TG Q VYNYQ +P YP+SP QVTTGYQLPVYNYQ FPAYPSSPFQ
Sbjct: 286 QAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQ 345
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
VT GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 346 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 405
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP+S QVTTGYQ VYNYQ P P
Sbjct: 406 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 460
Score = 315 bits (807), Expect = 4e-86
Identities = 147/175 (84%), Positives = 152/175 (86%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
Q + AYP SP QV G QL VYNYQ +P YP+SPFQV TGYQ PVYNYQ FPAYP+SP Q
Sbjct: 262 QPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQ 321
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
VT GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 322 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 381
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP+S QVTTGYQ VYNYQ P P
Sbjct: 382 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 436
Score = 315 bits (806), Expect = 5e-86
Identities = 146/175 (83%), Positives = 152/175 (86%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP+SP QV TG Q VYNYQ +P YP SPFQVT GYQLPVYNYQ FPAYP+SPFQ
Sbjct: 238 QAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQ 297
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
V GYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 298 VATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 357
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP+S QVTTGYQ VYNYQ P P
Sbjct: 358 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 412
>gi|54292110 deleted in azoospermia 3 [Homo sapiens]
Length = 438
Score = 679 bits (1753), Expect = 0.0
Identities = 323/340 (95%), Positives = 326/340 (95%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
Query: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
GCQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
Query: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300
PAYP+SPFQV TGYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYP+SPFQV T
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVAT 300
Query: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
GYQ PVYNYQAFPAYPNS VQVTTGYQ VYNYQ P P
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP 340
Score = 389 bits (1000), Expect = e-108
Identities = 176/201 (87%), Positives = 184/201 (91%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP+SP QV TG Q VYNYQ +P YP+SP QVTTGYQLPVYNYQ FPAYP+SPFQ
Sbjct: 238 QAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQ 297
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
V GYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYP+SPFQV TGYQ PVYNY
Sbjct: 298 VATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNY 357
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 345
QAFPAYP+SP QVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR
Sbjct: 358 QAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 417
Query: 346 RNLWTEAYKWWYLVCLIQRRD 366
RNLWTEAYKWWYLVCLIQRRD
Sbjct: 418 RNLWTEAYKWWYLVCLIQRRD 438
>gi|54292105 deleted in azoospermia 2 isoform 2 [Homo sapiens]
Length = 534
Score = 679 bits (1753), Expect = 0.0
Identities = 323/340 (95%), Positives = 325/340 (95%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
Sbjct: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
Sbjct: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
Query: 181 GCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF 240
GCQLLVYNYQEYPTYPDS FQVTTGYQLPVYNYQPFPAYP SPFQVTAGYQLPVYNYQAF
Sbjct: 181 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF 240
Query: 241 PAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTT 300
PAYP+SPFQV TGYQ PVYNYQ FPAYPSSPFQVT GYQLPVYNYQAFPAYP+SPFQV T
Sbjct: 241 PAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVAT 300
Query: 301 GYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
GYQ PVYNYQAFPAYPNS VQVTTGYQ VYNYQ P P
Sbjct: 301 GYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYP 340
Score = 409 bits (1052), Expect = e-114
Identities = 188/201 (93%), Positives = 190/201 (94%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP SP QV TG QL VYNYQ +P YP SPFQVTTGYQLPVYNYQ FPAYPSSPFQ
Sbjct: 334 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQ 393
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
VT GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 394 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 453
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 345
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR
Sbjct: 454 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQR 513
Query: 346 RNLWTEAYKWWYLVCLIQRRD 366
RNLWTEAYKWWYLVCLIQRRD
Sbjct: 514 RNLWTEAYKWWYLVCLIQRRD 534
Score = 315 bits (807), Expect = 4e-86
Identities = 147/175 (84%), Positives = 152/175 (86%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
Q + AYP SP QV G QL VYNYQ +P YP+SPFQV TGYQ PVYNYQ FPAYP+SP Q
Sbjct: 262 QPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQ 321
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
VT GYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 322 VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 381
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP+S QVTTGYQ VYNYQ P P
Sbjct: 382 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 436
Score = 315 bits (806), Expect = 5e-86
Identities = 146/175 (83%), Positives = 152/175 (86%)
Query: 166 QAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQ 225
QA+ AYP+SP QV TG Q VYNYQ +P YP SPFQVT GYQLPVYNYQ FPAYP+SPFQ
Sbjct: 238 QAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQ 297
Query: 226 VTAGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 285
V GYQ PVYNYQAFPAYP+SP QVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY
Sbjct: 298 VATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY 357
Query: 286 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCP 340
QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP+S QVTTGYQ VYNYQ P P
Sbjct: 358 QAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYP 412
>gi|25121978 deleted in azoospermia-like [Homo sapiens]
Length = 295
Score = 328 bits (841), Expect = 5e-90
Identities = 162/196 (82%), Positives = 172/196 (87%)
Query: 1 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
MS ANPETPNSTISREASTQSSSAA SQG++LPEGKI+PNTVFVGGID RMDETEI S F
Sbjct: 1 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF 60
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC 120
RYGSVKEVKIIT+RTGVSKGYGFVSF NDVDVQKIV SQI+FHGKKLKLGPAIRKQ LC
Sbjct: 61 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC 120
Query: 121 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT 180
A HVQPRPLV N PPPPQFQNVW NPNTETY+QP T NP+TQ+VQAY YP+SP QVIT
Sbjct: 121 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT 180
Query: 181 GCQLLVYNYQEYPTYP 196
G QL VYNYQ P +P
Sbjct: 181 GYQLPVYNYQMPPQWP 196
Score = 68.9 bits (167), Expect = 7e-12
Identities = 40/98 (40%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 257 PVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNY-QAFPAY 315
P Q AY P + + P + + + T P+ Y QA+P Y
Sbjct: 112 PAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTY 171
Query: 316 PNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAY 353
PNS VQV TGYQ VYNYQMPPQ PVGEQR + AY
Sbjct: 172 PNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAY 209
>gi|14719414 boule isoform 2 [Homo sapiens]
Length = 283
Score = 98.6 bits (244), Expect = 8e-21
Identities = 71/199 (35%), Positives = 98/199 (49%), Gaps = 39/199 (19%)
Query: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
G ++PN +FVGGID + +E+++ F +YGSVKEVKI+ +R GVSKGYGFV+F D Q
Sbjct: 28 GTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQ 87
Query: 95 KIV--GSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYL 152
KI+ ++++ KKL +GPAIRKQ++ PR ++ P T
Sbjct: 88 KILQEAEKLNYKDKKLNIGPAIRKQQVGI----PRSSIM--------------PAAGTMY 129
Query: 153 QPQITPNPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYP-----DSPFQVTTG-Y 206
T P T H AY H+P +T P +P SP V Y
Sbjct: 130 LTTSTGYPYTYHNGV--AYFHTP--EVTSVP---------PPWPSRSVCSSPVMVAQPIY 176
Query: 207 QLPVYNYQPFPAYPSSPFQ 225
Q P Y+YQ Y +Q
Sbjct: 177 QQPAYHYQATTQYLPGQWQ 195
>gi|37574731 boule isoform 1 [Homo sapiens]
Length = 295
Score = 98.6 bits (244), Expect = 8e-21
Identities = 71/199 (35%), Positives = 98/199 (49%), Gaps = 39/199 (19%)
Query: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
G ++PN +FVGGID + +E+++ F +YGSVKEVKI+ +R GVSKGYGFV+F D Q
Sbjct: 40 GTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQ 99
Query: 95 KIV--GSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYL 152
KI+ ++++ KKL +GPAIRKQ++ PR ++ P T
Sbjct: 100 KILQEAEKLNYKDKKLNIGPAIRKQQVGI----PRSSIM--------------PAAGTMY 141
Query: 153 QPQITPNPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYP-----DSPFQVTTG-Y 206
T P T H AY H+P +T P +P SP V Y
Sbjct: 142 LTTSTGYPYTYHNGV--AYFHTP--EVTSVP---------PPWPSRSVCSSPVMVAQPIY 188
Query: 207 QLPVYNYQPFPAYPSSPFQ 225
Q P Y+YQ Y +Q
Sbjct: 189 QQPAYHYQATTQYLPGQWQ 207
>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
Length = 450
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 142 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 201
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 202 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 258
Query: 117 QKLCARHVQP 126
+ V P
Sbjct: 259 VMTNKKMVTP 268
>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
Length = 370
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 72 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188
Query: 117 QKLCARHVQP 126
+ V P
Sbjct: 189 VMTNKKMVTP 198
>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
Length = 376
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 72 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188
Query: 117 QKLCARHVQP 126
+ V P
Sbjct: 189 VMTNKKMVTP 198
>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
Length = 380
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 72 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188
Query: 117 QKLCARHVQP 126
+ V P
Sbjct: 189 VMTNKKMVTP 198
>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
Length = 418
Score = 55.8 bits (133), Expect = 6e-08
Identities = 79/321 (24%), Positives = 122/321 (38%), Gaps = 50/321 (15%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 99 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPG 176
V VNP + N W+ NPV V +SP
Sbjct: 215 -------VMTNKKTVNP-----YTNGWK-------------LNPVVGAV-------YSP- 241
Query: 177 QVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYN 236
+ G LL QE + +P + +P + Y A + G VYN
Sbjct: 242 EFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN 301
Query: 237 -YQAFPAYPSSPFQVTTGYQLPVYNYQAFP-AYPSSPFQVTTGYQLPVYNYQAFPAYPSS 294
++A P P YQ PVY + Y + + T Y+ Y +
Sbjct: 302 TFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAAD 361
Query: 295 PFQVTTGYQLPVYNYQAFPAY 315
P+ P Y A A+
Sbjct: 362 PYHHALA-PAPTYGVGAMNAF 381
>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
Length = 370
Score = 55.5 bits (132), Expect = 8e-08
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 30/273 (10%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 79 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 137
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 138 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 194
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWR-NPNTETYLQPQITPNPVTQHVQAYSAYPHSP 175
V VNP + N W+ NP P+ P + A +A +
Sbjct: 195 -------VMTNKKTVNP-----YTNGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAAYR- 241
Query: 176 GQVITGCQLLVYN-YQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPV 234
G + G VYN ++ P P YQ Y + Y + +
Sbjct: 242 GAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAA 301
Query: 235 YNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAY 267
Y+ Y + P+ P Y A A+
Sbjct: 302 YSDSYGRVYAADPYHHALA-PAPTYGVGAMNAF 333
>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 55.1 bits (131), Expect = 1e-07
Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 49/320 (15%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 79 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 137
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 138 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 194
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPG 176
V VNP + N W+ NPV V +SP
Sbjct: 195 -------VMTNKKTVNP-----YTNGWK-------------LNPVVGAV-------YSP- 221
Query: 177 QVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYN 236
+ G LL QE + +P + +P + Y A + G VYN
Sbjct: 222 EFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN 281
Query: 237 -YQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSP 295
++A P P YQ Y + Y + + T Y+ Y + P
Sbjct: 282 TFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYSDSYGRVYAADP 341
Query: 296 FQVTTGYQLPVYNYQAFPAY 315
+ P Y A A+
Sbjct: 342 YHHALA-PAPTYGVGAMNAF 360
>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
Length = 395
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/264 (26%), Positives = 106/264 (40%), Gaps = 48/264 (18%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 99 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPG 176
V VNP + N W+ NPV V +SP
Sbjct: 215 -------VMTNKKTVNP-----YTNGWK-------------LNPVVGAV-------YSP- 241
Query: 177 QVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYN 236
+ G LL QE + +P + +P + Y A + G VYN
Sbjct: 242 EFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN 301
Query: 237 -YQAFPAYPSSPFQVTTGYQLPVY 259
++A P P YQ PVY
Sbjct: 302 TFRAAAPPPPIPAYGGVVYQEPVY 325
>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
Length = 392
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/264 (26%), Positives = 106/264 (40%), Gaps = 48/264 (18%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 99 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 157
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 158 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 214
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPG 176
V VNP + N W+ NPV V +SP
Sbjct: 215 -------VMTNKKTVNP-----YTNGWK-------------LNPVVGAV-------YSP- 241
Query: 177 QVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYN 236
+ G LL QE + +P + +P + Y A + G VYN
Sbjct: 242 EFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN 301
Query: 237 -YQAFPAYPSSPFQVTTGYQLPVY 259
++A P P YQ PVY
Sbjct: 302 TFRAAAPPPPIPAYGGVVYQEPVY 325
>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 55.1 bits (131), Expect = 1e-07
Identities = 77/320 (24%), Positives = 120/320 (37%), Gaps = 49/320 (15%)
Query: 7 ETPNSTISREASTQSSSAAASQGWVLP------EGKIVPNTVFVGGIDARMDETEIGSCF 60
+T T+S A TQ+ AA + G E K P + V I R + ++ F
Sbjct: 79 DTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 137
Query: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 138 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 194
Query: 117 QKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPG 176
V VNP + N W+ NPV V +SP
Sbjct: 195 -------VMTNKKTVNP-----YTNGWK-------------LNPVVGAV-------YSP- 221
Query: 177 QVITGCQLLVYNYQEYPTYPDSPFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYN 236
+ G LL QE + +P + +P + Y A + G VYN
Sbjct: 222 EFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN 281
Query: 237 -YQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSP 295
++A P P YQ Y + Y + + T Y+ Y + P
Sbjct: 282 TFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYSDSYGRVYAADP 341
Query: 296 FQVTTGYQLPVYNYQAFPAY 315
+ P Y A A+
Sbjct: 342 YHHALA-PAPTYGVGAMNAF 360
>gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 36 KIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQK 95
K PN V++ MD+ + FG++G VK++T+ +G SKG+GFVSF D QK
Sbjct: 188 KEFPN-VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 96 IVGSQ--IHFHGKKLKLGPAIRK 116
V +GK++ +G A +K
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKK 269
Score = 33.5 bits (75), Expect = 0.31
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIV 97
++V +D +D+ + F +G++ K++ G SKG+GFV F + + K V
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAV 350
Score = 30.4 bits (67), Expect = 2.6
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQ- 100
+FV +D ++ + +G++ ++ + G SKGYGFV F ++ +
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMN 159
Query: 101 -IHFHGKKLKLG 111
+ +G+K+ +G
Sbjct: 160 GMLLNGRKVFVG 171
>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
Length = 451
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 2 SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
S+ +P T N ++++ + Q S +S+ E K P + V I R + ++
Sbjct: 142 SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 198
Query: 57 GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
FG++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++
Sbjct: 199 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 255
Query: 113 AIRKQKLCARHVQP 126
A + + V P
Sbjct: 256 ATARVMTNKKMVTP 269
>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
Length = 367
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 2 SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
S+ +P T N ++++ + Q S +S+ E K P + V I R + ++
Sbjct: 72 SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 128
Query: 57 GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
FG++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++
Sbjct: 129 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 185
Query: 113 AIRKQKLCARHVQP 126
A + + V P
Sbjct: 186 ATARVMTNKKMVTP 199
>gi|34303937 RNA binding motif protein, Y-linked, family 1, member F
[Homo sapiens]
Length = 496
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
P +F+GG++ +E + + FG++G + EV +I +RT S+G+ F++F N D +
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 99 SQ--IHFHGKKLKLGPA 113
HGK +K+ A
Sbjct: 67 DMNGTSLHGKAIKVEQA 83
>gi|56090529 RNA binding motif protein, Y-linked, family 1, member J
[Homo sapiens]
Length = 496
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
P +F+GG++ +E + + FG++G + EV +I +RT S+G+ F++F N D +
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 99 SQ--IHFHGKKLKLGPA 113
HGK +K+ A
Sbjct: 67 DMNGTSLHGKAIKVEQA 83
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 53.1 bits (126), Expect = 4e-07
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQ- 100
V++ MD+ + FG++G VK++T+ +G SKG+GFVSF D QK V
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 101 -IHFHGKKLKLGPAIRK 116
+GK++ +G A +K
Sbjct: 253 GKELNGKQIYVGRAQKK 269
Score = 36.2 bits (82), Expect = 0.048
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 87
+F+ +D +D + F +G++ K++ + G SKGYGFV F
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 145
Score = 35.4 bits (80), Expect = 0.081
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 34/158 (21%)
Query: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQI 101
++V +D +D+ + F +G++ K++ G SKG+GFV F + + K V
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAV---T 351
Query: 102 HFHG-----KKLKLGPAIRK------------QKLCARHVQPRPLVVNP--PPPPQFQNV 142
+G K L + A RK Q++ + P P V+NP P PP +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP-VINPYQPAPPSGYFM 410
Query: 143 WRNPNTE---TYLQP----QITPNPVTQHVQAYSAYPH 173
P T+ Y P Q+ P+P A A PH
Sbjct: 411 AAIPQTQNRAAYYPPSQIAQLRPSP---RWTAQGARPH 445
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 52.8 bits (125), Expect = 5e-07
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97
P +F+GG++ +E + + FG+YG + EV +I +R T S+G+ FV+F + D +
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 98 GSQ--IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQ 138
GK +K+ A + RH PPPPP+
Sbjct: 67 RDMNGKSLDGKAIKVEQATKPSFERGRH--------GPPPPPR 101
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 52.8 bits (125), Expect = 5e-07
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97
P +F+GG++ +E + + FG+YG + EV +I +R T S+G+ FV+F + D +
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 98 GSQ--IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQ 138
GK +K+ A + RH PPPPP+
Sbjct: 67 RDMNGKSLDGKAIKVEQATKPSFERGRH--------GPPPPPR 101
>gi|4826974 RNA binding motif protein, Y-linked, family 1, member A1
[Homo sapiens]
Length = 496
Score = 52.8 bits (125), Expect = 5e-07
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
P +F+GG++ +E + + FG++G + EV +I +RT S+G+ F++F N D +
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 99 SQ--IHFHGKKLKLGPA 113
HGK +K+ A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>gi|56090527 RNA binding motif protein, Y-linked, family 1, member E
[Homo sapiens]
Length = 496
Score = 52.8 bits (125), Expect = 5e-07
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 39 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG 98
P +F+GG++ +E + + FG++G + EV +I +RT S+G+ F++F N D +
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 99 SQ--IHFHGKKLKLGPA 113
HGK +K+ A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,816,025
Number of Sequences: 37866
Number of extensions: 884733
Number of successful extensions: 3721
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 3029
Number of HSP's gapped (non-prelim): 610
length of query: 366
length of database: 18,247,518
effective HSP length: 104
effective length of query: 262
effective length of database: 14,309,454
effective search space: 3749076948
effective search space used: 3749076948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.