Search of human proteins with 53793688

Search of human proteins with 53793688

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|53793688 histone cluster 2, H3a [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|53793688 histone cluster 2, H3a [Homo sapiens]                     264   1e-71
gi|31742503 histone cluster 2, H3c [Homo sapiens]                     264   1e-71
gi|183076548 histone cluster 2, H3d [Homo sapiens]                    264   1e-71
gi|4504287 histone cluster 1, H3e [Homo sapiens]                      262   6e-71
gi|4504295 histone cluster 1, H3h [Homo sapiens]                      262   6e-71
gi|4504289 histone cluster 1, H3i [Homo sapiens]                      262   6e-71
gi|4504281 histone cluster 1, H3a [Homo sapiens]                      262   6e-71
gi|10440560 histone cluster 1, H3f [Homo sapiens]                     262   6e-71
gi|21071021 histone cluster 1, H3d [Homo sapiens]                     262   6e-71
gi|4504297 histone cluster 1, H3b [Homo sapiens]                      262   6e-71
gi|4504293 histone cluster 1, H3j [Homo sapiens]                      262   6e-71
gi|4504285 histone cluster 1, H3c [Homo sapiens]                      262   6e-71
gi|4504291 H3 histone family, member H [Homo sapiens]                 262   6e-71
gi|4885385 H3 histone, family 3B [Homo sapiens]                       258   8e-70
gi|4504279 H3 histone, family 3A [Homo sapiens]                       258   8e-70
gi|4504299 histone cluster 3, H3 [Homo sapiens]                       257   2e-69
gi|188528667 histone H3-like [Homo sapiens]                           243   3e-65
gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]          217   3e-57
gi|169167761 PREDICTED: similar to HIStone family member (his-72...   213   3e-56
gi|88987392 PREDICTED: similar to HIStone family member (his-72)...   213   3e-56
gi|41147170 PREDICTED: similar to HIStone family member (his-72)...   213   3e-56
gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]       207   2e-54
gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]          159   9e-40
gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]          159   9e-40
gi|4502775 centromere protein A isoform a [Homo sapiens]              110   3e-25
gi|109637779 centromere protein A isoform b [Homo sapiens]             82   2e-16
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    33   0.094
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    33   0.094
gi|126722969 centromere protein T [Homo sapiens]                       32   0.12 
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]    31   0.36 

>gi|53793688 histone cluster 2, H3a [Homo sapiens]
          Length = 136

 Score =  264 bits (675), Expect = 1e-71
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|31742503 histone cluster 2, H3c [Homo sapiens]
          Length = 136

 Score =  264 bits (675), Expect = 1e-71
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|183076548 histone cluster 2, H3d [Homo sapiens]
          Length = 136

 Score =  264 bits (675), Expect = 1e-71
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504287 histone cluster 1, H3e [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504295 histone cluster 1, H3h [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504289 histone cluster 1, H3i [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504281 histone cluster 1, H3a [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|10440560 histone cluster 1, H3f [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|21071021 histone cluster 1, H3d [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504297 histone cluster 1, H3b [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504293 histone cluster 1, H3j [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504285 histone cluster 1, H3c [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504291 H3 histone family, member H [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4885385 H3 histone, family 3B [Homo sapiens]
          Length = 136

 Score =  258 bits (660), Expect = 8e-70
 Identities = 132/136 (97%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504279 H3 histone, family 3A [Homo sapiens]
          Length = 136

 Score =  258 bits (660), Expect = 8e-70
 Identities = 132/136 (97%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504299 histone cluster 3, H3 [Homo sapiens]
          Length = 136

 Score =  257 bits (656), Expect = 2e-69
 Identities = 131/136 (96%), Positives = 133/136 (97%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|188528667 histone H3-like [Homo sapiens]
          Length = 135

 Score =  243 bits (620), Expect = 3e-65
 Identities = 128/136 (94%), Positives = 130/136 (95%), Gaps = 1/136 (0%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKS P+T GVK PHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTE 59

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDF TDLRFQS+AV ALQEASEAYLVGL EDTNLCAIHAKRVTI
Sbjct: 60  LLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTI 119

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 120 MPKDIQLARRIRGERA 135


>gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 147

 Score =  217 bits (552), Expect = 3e-57
 Identities = 109/136 (80%), Positives = 123/136 (90%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MP+D+QLARR+RGE A
Sbjct: 121 MPRDMQLARRLRGEGA 136


>gi|169167761 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  213 bits (543), Expect = 3e-56
 Identities = 107/134 (79%), Positives = 121/134 (90%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|88987392 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  213 bits (543), Expect = 3e-56
 Identities = 107/134 (79%), Positives = 121/134 (90%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|41147170 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  213 bits (543), Expect = 3e-56
 Identities = 107/134 (79%), Positives = 121/134 (90%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]
          Length = 141

 Score =  207 bits (528), Expect = 2e-54
 Identities = 105/122 (86%), Positives = 115/122 (94%)

Query: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79

Query: 75  IAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
           IAQD KTDLRFQS+A+ ALQEASEAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139

Query: 135 RA 136
           RA
Sbjct: 140 RA 141


>gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  159 bits (401), Expect = 9e-40
 Identities = 80/101 (79%), Positives = 90/101 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYL 101
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  159 bits (401), Expect = 9e-40
 Identities = 80/101 (79%), Positives = 90/101 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYL 101
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEASEAYL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|4502775 centromere protein A isoform a [Homo sapiens]
          Length = 140

 Score =  110 bits (276), Expect = 3e-25
 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 9/132 (6%)

Query: 9   RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 121
           RKLPF RL REI   F    D  +Q+ A++ALQEA+EA+LV LFED  L  +HA RVT+ 
Sbjct: 63  RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122

Query: 122 PKDIQLARRIRG 133
           PKD+QLARRIRG
Sbjct: 123 PKDVQLARRIRG 134


>gi|109637779 centromere protein A isoform b [Homo sapiens]
          Length = 114

 Score = 81.6 bits (200), Expect = 2e-16
 Identities = 56/130 (43%), Positives = 69/130 (53%), Gaps = 31/130 (23%)

Query: 9   RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPK 123
           RKLPF RL                        A+EA+LV LFED  L  +HA RVT+ PK
Sbjct: 63  RKLPFSRL------------------------AAEAFLVHLFEDAYLLTLHAGRVTLFPK 98

Query: 124 DIQLARRIRG 133
           D+QLARRIRG
Sbjct: 99  DVQLARRIRG 108


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 32.7 bits (73), Expect = 0.094
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +    A + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 32.7 bits (73), Expect = 0.094
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +    A + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|126722969 centromere protein T [Homo sapiens]
          Length = 561

 Score = 32.3 bits (72), Expect = 0.12
 Identities = 15/55 (27%), Positives = 29/55 (52%)

Query: 79  FKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
           F   +  +  A+  +++  + Y   L +D  + A HA R T+ P+D++L  R +G
Sbjct: 469 FYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQG 523


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 104 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 157

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++       L     AV  +       L  +  +    A + KRVTI 
Sbjct: 158 ------FPRVLKQV----HXGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 207

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 208 SRDIQMAVRL 217


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.131    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,403,888
Number of Sequences: 37866
Number of extensions: 159265
Number of successful extensions: 606
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 65
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.