LOC644950 17108

Name: LOC644950	Sequence: fasta or formatted (141aa)		NCBI GI: 239742093
Description: PREDICTED: similar to histone H3.3B		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 17 2 C cysteine 1.4 2 1 D aspartate 5.0 7 1 E glutamate 5.0 7 1 F phenylalanine 2.1 3 1 G glycine 5.0 7 2 H histidine 2.8 4 2 I isoleucine 7.8 11 1 K lysine 10.6 15 2 L leucine 11.3 16 2 M methionine 1.4 2 1 N asparagine 0.7 1 1 P proline 2.8 4 1 Q glutamine 7.8 11 1 R arginine 9.9 14 2 S serine 3.5 5 1 T threonine 5.7 8 1 V valine 2.8 4 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to histone H3.3B H3F3B 0.756 H3 histone, family 3B H3F3A 0.756 H3 histone, family 3A HIST2H3A 0.728 histone cluster 2, H3a HIST2H3C 0.728 histone cluster 2, H3c HIST2H3D 0.728 histone cluster 2, H3d HIST1H3E 0.724 histone cluster 1, H3e HIST1H3H 0.724 histone cluster 1, H3h HIST1H3I 0.724 histone cluster 1, H3i HIST1H3A 0.724 histone cluster 1, H3a HIST1H3F 0.724 histone cluster 1, H3f HIST1H3D 0.724 histone cluster 1, H3d HIST1H3B 0.724 histone cluster 1, H3b HIST1H3J 0.724 histone cluster 1, H3j HIST1H3C 0.724 histone cluster 1, H3c HIST1H3G 0.724 H3 histone family, member H HIST3H3 0.700 histone cluster 3, H3 LOC440093 0.688 histone H3-like LOC340096 0.624 PREDICTED: similar to hCG1642908 LOC391769 0.616 PREDICTED: similar to HIStone family member (his-72... LOC391769 0.616 PREDICTED: similar to HIStone family member (his-72)... LOC391769 0.616 PREDICTED: similar to HIStone family member (his-72)... LOC340096 0.420 PREDICTED: similar to hCG1642908 LOC340096 0.420 PREDICTED: similar to hCG1642908 CENPA 0.272 centromere protein A isoform a CENPA 0.180 centromere protein A isoform b SMC2 0.020 structural maintenance of chromosomes 2 SMC2 0.020 structural maintenance of chromosomes 2 SMC2 0.020 structural maintenance of chromosomes 2 MYH10 0.016 myosin, heavy polypeptide 10, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.