Guide to the Human Genome
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Name: OR4C12 Sequence: fasta or formatted (309aa) NCBI GI: 52627207
Description:

olfactory receptor, family 4, subfamily C, member 12

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         17           1
 C cysteine            3.9         12           1
 D aspartate           2.6          8           1
 E glutamate           2.6          8           1
 F phenylalanine       6.1         19           2
 G glycine             3.6         11           2
 H histidine           2.3          7           1
 I isoleucine          9.7         30           2
 K lysine              5.2         16           3
 L leucine            13.3         41           2
 M methionine          3.2         10           1
 N asparagine          4.2         13           2
 P proline             3.6         11           1
 Q glutamine           1.6          5           1
 R arginine            1.9          6           1
 S serine              7.1         22           4
 T threonine           7.4         23           2
 V valine             11.7         36           3
 W tryptophan          1.0          3           1
 Y tyrosine            3.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily C, member 12... 
OR4C13                0.672   olfactory receptor, family 4, subfamily C, member 13...
OR4C46                0.663   olfactory receptor, family 4, subfamily C, member 46...
OR4C3                 0.629   olfactory receptor, family 4, subfamily C, member 3 ...
OR4A47                0.628   olfactory receptor, family 4, subfamily A, member 4...
OR4C11                0.619   olfactory receptor, family 4, subfamily C, member 11...
OR4A15                0.616   olfactory receptor, family 4, subfamily A, member 15...
OR4C6                 0.609   olfactory receptor, family 4, subfamily C, member 6 ...
OR4C15                0.604   olfactory receptor, family 4, subfamily C, member 15...
OR4C45                0.602   olfactory receptor, family 4, subfamily C, member 45...
OR4B1                 0.568   olfactory receptor, family 4, subfamily B, member 1 ...
OR4S2                 0.565   olfactory receptor, family 4, subfamily S, member 2...
OR4C16                0.561   olfactory receptor, family 4, subfamily C, member 1...
OR4A5                 0.558   olfactory receptor, family 4, subfamily A, member 5 ...
OR4X2                 0.546   olfactory receptor, family 4, subfamily X, member 2 ...
OR4P4                 0.536   olfactory receptor, family 4, subfamily P, member 4 ...
OR4S1                 0.532   olfactory receptor, family 4, subfamily S, member 1 ...
OR4A16                0.532   olfactory receptor, family 4, subfamily A, member 16...
OR4X1                 0.517   olfactory receptor, family 4, subfamily X, member 1 ...
OR4D5                 0.486   olfactory receptor, family 4, subfamily D, member 5 ...
OR4D11                0.485   olfactory receptor, family 4, subfamily D, member 11...
OR4E2                 0.483   olfactory receptor, family 4, subfamily E, member 2 ...
OR4D10                0.483   olfactory receptor, family 4, subfamily D, member 10...
OR4Q3                 0.480   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4K17                0.474   olfactory receptor, family 4, subfamily K, member 17...
OR4K15                0.471   olfactory receptor, family 4, subfamily K, member 15...
OR4D9                 0.469   olfactory receptor, family 4, subfamily D, member 9 ...
OR4F17                0.468   olfactory receptor, family 4, subfamily F, member 17...
OR4F4                 0.468   olfactory receptor, family 4, subfamily F, member 4 ...
OR4M1                 0.466   olfactory receptor, family 4, subfamily M, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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