Guide to the Human Genome
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Name: OR4C11 Sequence: fasta or formatted (310aa) NCBI GI: 52317232
Description:

olfactory receptor, family 4, subfamily C, member 11

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         17           1
 C cysteine            3.9         12           2
 D aspartate           2.6          8           1
 E glutamate           1.9          6           1
 F phenylalanine       6.5         20           2
 G glycine             4.2         13           1
 H histidine           2.3          7           1
 I isoleucine         12.3         38           2
 K lysine              4.8         15           3
 L leucine            12.6         39           3
 M methionine          4.5         14           1
 N asparagine          3.5         11           2
 P proline             4.8         15           2
 Q glutamine           2.9          9           2
 R arginine            3.2         10           1
 S serine              7.4         23           3
 T threonine           5.8         18           2
 V valine              6.5         20           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily C, member 11... 
OR4C16                0.695   olfactory receptor, family 4, subfamily C, member 1...
OR4C12                0.611   olfactory receptor, family 4, subfamily C, member 12...
OR4S2                 0.584   olfactory receptor, family 4, subfamily S, member 2...
OR4C46                0.574   olfactory receptor, family 4, subfamily C, member 46...
OR4A15                0.572   olfactory receptor, family 4, subfamily A, member 15...
OR4A47                0.569   olfactory receptor, family 4, subfamily A, member 4...
OR4C15                0.565   olfactory receptor, family 4, subfamily C, member 15...
OR4C13                0.562   olfactory receptor, family 4, subfamily C, member 13...
OR4B1                 0.549   olfactory receptor, family 4, subfamily B, member 1 ...
OR4C3                 0.545   olfactory receptor, family 4, subfamily C, member 3 ...
OR4X2                 0.544   olfactory receptor, family 4, subfamily X, member 2 ...
OR4X1                 0.540   olfactory receptor, family 4, subfamily X, member 1 ...
OR4A5                 0.534   olfactory receptor, family 4, subfamily A, member 5 ...
OR4E2                 0.527   olfactory receptor, family 4, subfamily E, member 2 ...
OR4P4                 0.525   olfactory receptor, family 4, subfamily P, member 4 ...
OR4C6                 0.520   olfactory receptor, family 4, subfamily C, member 6 ...
OR4S1                 0.517   olfactory receptor, family 4, subfamily S, member 1 ...
OR4C45                0.508   olfactory receptor, family 4, subfamily C, member 45...
OR4A16                0.503   olfactory receptor, family 4, subfamily A, member 16...
OR4N5                 0.502   olfactory receptor, family 4, subfamily N, member 5 ...
OR4Q3                 0.490   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D1                 0.485   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D10                0.485   olfactory receptor, family 4, subfamily D, member 10...
OR4K2                 0.483   olfactory receptor, family 4, subfamily K, member 2 ...
OR4K17                0.483   olfactory receptor, family 4, subfamily K, member 17...
OR4N2                 0.482   olfactory receptor, family 4, subfamily N, member 2 ...
OR4D5                 0.480   olfactory receptor, family 4, subfamily D, member 5 ...
OR4K15                0.475   olfactory receptor, family 4, subfamily K, member 15...
OR4D9                 0.471   olfactory receptor, family 4, subfamily D, member 9 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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