Guide to the Human Genome
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Name: OR4F17 Sequence: fasta or formatted (305aa) NCBI GI: 52546739
Description:

olfactory receptor, family 4, subfamily F, member 17

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         17           1
 C cysteine            3.0          9           1
 D aspartate           4.3         13           1
 E glutamate           1.0          3           1
 F phenylalanine       9.2         28           2
 G glycine             5.2         16           2
 H histidine           3.0          9           1
 I isoleucine          9.8         30           2
 K lysine              4.3         13           1
 L leucine            13.1         40           2
 M methionine          3.6         11           1
 N asparagine          2.3          7           1
 P proline             3.9         12           1
 Q glutamine           2.3          7           1
 R arginine            2.6          8           1
 S serine              8.2         25           2
 T threonine           5.9         18           2
 V valine              8.5         26           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily F, member 17... 
OR4F4                 0.986   olfactory receptor, family 4, subfamily F, member 4 ...
OR4F5                 0.986   olfactory receptor, family 4, subfamily F, member 5 ...
OR4K1                 0.613   olfactory receptor, family 4, subfamily K, member 1 ...
OR4K15                0.609   olfactory receptor, family 4, subfamily K, member 15...
OR4K5                 0.589   olfactory receptor, family 4, subfamily K, member 5 ...
OR4K14                0.589   olfactory receptor, family 4, subfamily K, member 14...
OR4K13                0.584   olfactory receptor, family 4, subfamily K, member 13...
OR4F15                0.582   olfactory receptor, family 4, subfamily F, member 15...
OR4F6                 0.577   olfactory receptor, family 4, subfamily F, member 6 ...
OR4K17                0.577   olfactory receptor, family 4, subfamily K, member 17...
OR4F3                 0.573   olfactory receptor, family 4, subfamily F, member 3 ...
OR4F29                0.573   olfactory receptor, family 4, subfamily F, member 2...
OR4F16                0.573   olfactory receptor, family 4, subfamily F, member 16...
OR4F21                0.572   olfactory receptor, family 4, subfamily F, member 21...
OR4K2                 0.568   olfactory receptor, family 4, subfamily K, member 2 ...
OR4L1                 0.551   olfactory receptor, family 4, subfamily L, member 1 ...
OR4Q3                 0.543   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D1                 0.517   olfactory receptor, family 4, subfamily D, member 1 ...
OR4N5                 0.512   olfactory receptor, family 4, subfamily N, member 5 ...
OR4D9                 0.512   olfactory receptor, family 4, subfamily D, member 9 ...
OR4M1                 0.507   olfactory receptor, family 4, subfamily M, member 1 ...
OR4D11                0.500   olfactory receptor, family 4, subfamily D, member 11...
OR4D2                 0.498   olfactory receptor, family 4, subfamily D, member 2 ...
OR4S2                 0.497   olfactory receptor, family 4, subfamily S, member 2...
OR4N4                 0.490   olfactory receptor, family 4, subfamily N, member 4 ...
OR4M2                 0.488   olfactory receptor, family 4, subfamily M, member 2 ...
OR4E2                 0.486   olfactory receptor, family 4, subfamily E, member 2 ...
OR4N2                 0.486   olfactory receptor, family 4, subfamily N, member 2 ...
OR4D10                0.485   olfactory receptor, family 4, subfamily D, member 10...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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