Guide to the Human Genome
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Name: OR4B1 Sequence: fasta or formatted (309aa) NCBI GI: 53793679
Description:

olfactory receptor, family 4, subfamily B, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         18           1
 C cysteine            3.6         11           1
 D aspartate           2.6          8           1
 E glutamate           3.2         10           1
 F phenylalanine       8.1         25           3
 G glycine             4.5         14           2
 H histidine           2.6          8           1
 I isoleucine         10.7         33           2
 K lysine              3.6         11           2
 L leucine            12.6         39           2
 M methionine          2.3          7           1
 N asparagine          3.2         10           1
 P proline             4.2         13           1
 Q glutamine           2.3          7           1
 R arginine            2.6          8           2
 S serine              8.7         27           2
 T threonine           5.5         17           1
 V valine              9.7         30           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily B, member 1 ... 
OR4S2                 0.640   olfactory receptor, family 4, subfamily S, member 2...
OR4X1                 0.574   olfactory receptor, family 4, subfamily X, member 1 ...
OR4X2                 0.572   olfactory receptor, family 4, subfamily X, member 2 ...
OR4C6                 0.569   olfactory receptor, family 4, subfamily C, member 6 ...
OR4C12                0.567   olfactory receptor, family 4, subfamily C, member 12...
OR4A15                0.564   olfactory receptor, family 4, subfamily A, member 15...
OR4C46                0.562   olfactory receptor, family 4, subfamily C, member 46...
OR4C15                0.557   olfactory receptor, family 4, subfamily C, member 15...
OR4C11                0.555   olfactory receptor, family 4, subfamily C, member 11...
OR4C13                0.553   olfactory receptor, family 4, subfamily C, member 13...
OR4A47                0.553   olfactory receptor, family 4, subfamily A, member 4...
OR4S1                 0.545   olfactory receptor, family 4, subfamily S, member 1 ...
OR4C3                 0.545   olfactory receptor, family 4, subfamily C, member 3 ...
OR4A5                 0.531   olfactory receptor, family 4, subfamily A, member 5 ...
OR4E2                 0.530   olfactory receptor, family 4, subfamily E, member 2 ...
OR4P4                 0.526   olfactory receptor, family 4, subfamily P, member 4 ...
OR4C45                0.526   olfactory receptor, family 4, subfamily C, member 45...
OR4C16                0.523   olfactory receptor, family 4, subfamily C, member 1...
OR4D5                 0.520   olfactory receptor, family 4, subfamily D, member 5 ...
OR4M1                 0.518   olfactory receptor, family 4, subfamily M, member 1 ...
OR4K2                 0.506   olfactory receptor, family 4, subfamily K, member 2 ...
OR4Q3                 0.504   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4M2                 0.501   olfactory receptor, family 4, subfamily M, member 2 ...
OR4N5                 0.497   olfactory receptor, family 4, subfamily N, member 5 ...
OR4D9                 0.496   olfactory receptor, family 4, subfamily D, member 9 ...
OR4K17                0.492   olfactory receptor, family 4, subfamily K, member 17...
OR4A16                0.491   olfactory receptor, family 4, subfamily A, member 16...
OR4D11                0.487   olfactory receptor, family 4, subfamily D, member 11...
OR4N2                 0.486   olfactory receptor, family 4, subfamily N, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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