Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR4D5 Sequence: fasta or formatted (318aa) NCBI GI: 50233848
Description:

olfactory receptor, family 4, subfamily D, member 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         18           2
 C cysteine            2.8          9           1
 D aspartate           3.1         10           1
 E glutamate           1.6          5           1
 F phenylalanine       7.2         23           3
 G glycine             5.0         16           2
 H histidine           3.1         10           1
 I isoleucine          6.9         22           1
 K lysine              3.1         10           2
 L leucine            14.5         46           2
 M methionine          4.4         14           1
 N asparagine          3.5         11           2
 P proline             5.0         16           1
 Q glutamine           2.5          8           1
 R arginine            3.8         12           2
 S serine              6.3         20           2
 T threonine           7.2         23           2
 V valine              9.4         30           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily D, member 5 ... 
OR4D9                 0.601   olfactory receptor, family 4, subfamily D, member 9 ...
OR4D1                 0.593   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D6                 0.578   olfactory receptor, family 4, subfamily D, member 6 ...
OR4D2                 0.563   olfactory receptor, family 4, subfamily D, member 2 ...
OR4D11                0.558   olfactory receptor, family 4, subfamily D, member 11...
OR4Q3                 0.554   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D10                0.547   olfactory receptor, family 4, subfamily D, member 10...
OR4N2                 0.542   olfactory receptor, family 4, subfamily N, member 2 ...
OR4M1                 0.539   olfactory receptor, family 4, subfamily M, member 1 ...
OR4N5                 0.531   olfactory receptor, family 4, subfamily N, member 5 ...
OR4E2                 0.529   olfactory receptor, family 4, subfamily E, member 2 ...
OR4K14                0.523   olfactory receptor, family 4, subfamily K, member 14...
OR4M2                 0.515   olfactory receptor, family 4, subfamily M, member 2 ...
OR4S2                 0.513   olfactory receptor, family 4, subfamily S, member 2...
OR4K2                 0.513   olfactory receptor, family 4, subfamily K, member 2 ...
OR4C6                 0.510   olfactory receptor, family 4, subfamily C, member 6 ...
OR4C15                0.508   olfactory receptor, family 4, subfamily C, member 15...
OR4A47                0.506   olfactory receptor, family 4, subfamily A, member 4...
OR4N4                 0.505   olfactory receptor, family 4, subfamily N, member 4 ...
OR4C46                0.503   olfactory receptor, family 4, subfamily C, member 46...
OR4K17                0.503   olfactory receptor, family 4, subfamily K, member 17...
OR4K1                 0.500   olfactory receptor, family 4, subfamily K, member 1 ...
OR4C13                0.498   olfactory receptor, family 4, subfamily C, member 13...
OR4C3                 0.498   olfactory receptor, family 4, subfamily C, member 3 ...
OR4B1                 0.497   olfactory receptor, family 4, subfamily B, member 1 ...
OR4K15                0.495   olfactory receptor, family 4, subfamily K, member 15...
OR4A15                0.490   olfactory receptor, family 4, subfamily A, member 15...
OR4L1                 0.485   olfactory receptor, family 4, subfamily L, member 1 ...
OR4K13                0.474   olfactory receptor, family 4, subfamily K, member 13...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press